BLASTX nr result
ID: Ophiopogon23_contig00017178
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00017178
(418 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020265387.1| transcription initiation factor IIF subunit ... 85 2e-16
gb|PNT29086.1| hypothetical protein POPTR_006G009100v3 [Populus ... 69 5e-11
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu... 69 5e-11
ref|XP_009383582.1| PREDICTED: transcription initiation factor I... 69 7e-11
gb|PAN47809.1| hypothetical protein PAHAL_B02346 [Panicum hallii] 68 2e-10
ref|XP_004983299.1| transcription initiation factor IIF subunit ... 67 2e-10
ref|XP_004983298.1| transcription initiation factor IIF subunit ... 67 3e-10
gb|KQK89381.1| hypothetical protein SETIT_034500mg [Setaria ital... 67 3e-10
gb|KQK89382.1| hypothetical protein SETIT_034500mg [Setaria ital... 67 3e-10
ref|XP_020590941.1| transcription initiation factor IIF subunit ... 67 5e-10
ref|XP_010928148.1| PREDICTED: transcription initiation factor I... 67 5e-10
ref|XP_015697454.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 66 6e-10
ref|XP_023895578.1| transcription initiation factor IIF subunit ... 66 6e-10
gb|OVA00393.1| Transcription initiation factor IIF [Macleaya cor... 66 6e-10
gb|AQK65935.1| Transcription initiation factor IIF, alpha subuni... 65 7e-10
ref|XP_008811153.2| PREDICTED: transcription initiation factor I... 65 1e-09
ref|XP_018842214.1| PREDICTED: transcription initiation factor I... 65 1e-09
gb|PNT29083.1| hypothetical protein POPTR_006G009100v3 [Populus ... 65 1e-09
gb|PNT29088.1| hypothetical protein POPTR_006G009100v3 [Populus ... 65 2e-09
ref|XP_020688104.1| transcription initiation factor IIF subunit ... 65 2e-09
>ref|XP_020265387.1| transcription initiation factor IIF subunit alpha [Asparagus
officinalis]
gb|ONK70150.1| uncharacterized protein A4U43_C05F30770 [Asparagus officinalis]
Length = 533
Score = 85.1 bits (209), Expect = 2e-16
Identities = 53/120 (44%), Positives = 57/120 (47%)
Frame = +3
Query: 57 VMSPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTPXXXXXXXXXXXXXDXXXXXXXXXX 236
+ SPVLAPKQKDG K+EP D SPSKTTP+GSAR TP D
Sbjct: 372 ISSPVLAPKQKDGIKEEPADISPSKTTPSGSARGTPSTSKSKAKKKSGNDDVKTTNNVSV 431
Query: 237 XXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQD 416
P VKEE VTEEEIRSVLLATAP+TTQD
Sbjct: 432 KKEPKPLVKEEPSSGSKPSASSKSSASAASKIGSTLSSGPVTEEEIRSVLLATAPLTTQD 491
>gb|PNT29086.1| hypothetical protein POPTR_006G009100v3 [Populus trichocarpa]
Length = 534
Score = 69.3 bits (168), Expect = 5e-11
Identities = 48/121 (39%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +3
Query: 60 MSPVLAPKQKDG-PKDEPTDNSPSKTTPAGSARVTPXXXXXXXXXXXXX-DXXXXXXXXX 233
+SPVLAPKQKD PK+EP DNSP+K TP GSA+ TP D
Sbjct: 371 ISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNADDAKTSNGAP 430
Query: 234 XXXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQ 413
P VKEE VTEEEIR+VLL PVTTQ
Sbjct: 431 VKKEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQNGPVTTQ 490
Query: 414 D 416
D
Sbjct: 491 D 491
>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
Length = 536
Score = 69.3 bits (168), Expect = 5e-11
Identities = 48/121 (39%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +3
Query: 60 MSPVLAPKQKDG-PKDEPTDNSPSKTTPAGSARVTPXXXXXXXXXXXXX-DXXXXXXXXX 233
+SPVLAPKQKD PK+EP DNSP+K TP GSA+ TP D
Sbjct: 373 ISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNADDAKTSNGAP 432
Query: 234 XXXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQ 413
P VKEE VTEEEIR+VLL PVTTQ
Sbjct: 433 VKKEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQNGPVTTQ 492
Query: 414 D 416
D
Sbjct: 493 D 493
>ref|XP_009383582.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Musa acuminata subsp. malaccensis]
Length = 533
Score = 68.9 bits (167), Expect = 7e-11
Identities = 46/122 (37%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +3
Query: 60 MSPVLAPKQKDGPKDEPTDNSPSKTT-PAGSARVTP--XXXXXXXXXXXXXDXXXXXXXX 230
MSPVLAPKQKD PKDEPT+N+PSK P+GSAR TP D
Sbjct: 370 MSPVLAPKQKDAPKDEPTENTPSKAAPPSGSARSTPTTSKSSKAKRKPGSDDVKNNNGLP 429
Query: 231 XXXXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTT 410
P K+E VTE+EIR+VLL+ P+TT
Sbjct: 430 VKKMKDNPSAKDELPTSSKSNVPPKSSPATTSRPGSTPSTAPVTEDEIRTVLLSATPLTT 489
Query: 411 QD 416
QD
Sbjct: 490 QD 491
>gb|PAN47809.1| hypothetical protein PAHAL_B02346 [Panicum hallii]
Length = 427
Score = 67.8 bits (164), Expect = 2e-10
Identities = 45/118 (38%), Positives = 49/118 (41%)
Frame = +3
Query: 63 SPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTPXXXXXXXXXXXXXDXXXXXXXXXXXX 242
SPVLAPKQKD KDEP DNSP K TP+G AR TP D
Sbjct: 266 SPVLAPKQKDQVKDEPVDNSPVKPTPSGHARSTPPASKSKQKRKSGADDAKTSGSAASKK 325
Query: 243 XXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQD 416
+ + VTE+EIRSVLLA APVTTQD
Sbjct: 326 AKVEWDTKASNIKEEAPSSAKPTLKSSASSKSATNVLPVTEDEIRSVLLAVAPVTTQD 383
>ref|XP_004983299.1| transcription initiation factor IIF subunit alpha isoform X2
[Setaria italica]
Length = 530
Score = 67.4 bits (163), Expect = 2e-10
Identities = 45/118 (38%), Positives = 49/118 (41%)
Frame = +3
Query: 63 SPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTPXXXXXXXXXXXXXDXXXXXXXXXXXX 242
SPVLAPKQKD KDEP DNSP+K TP+G AR TP D
Sbjct: 369 SPVLAPKQKDQVKDEPVDNSPAKQTPSGHARSTPPASKFKQKRKSGADDTKTSGGAASKK 428
Query: 243 XXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQD 416
+ VTE+EIRSVLLA APVTTQD
Sbjct: 429 AKVESDTKASGIKEEAPASAKPTSKTSASSKSGTNVSPVTEDEIRSVLLAVAPVTTQD 486
>ref|XP_004983298.1| transcription initiation factor IIF subunit alpha isoform X1
[Setaria italica]
Length = 531
Score = 67.4 bits (163), Expect = 3e-10
Identities = 45/118 (38%), Positives = 49/118 (41%)
Frame = +3
Query: 63 SPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTPXXXXXXXXXXXXXDXXXXXXXXXXXX 242
SPVLAPKQKD KDEP DNSP+K TP+G AR TP D
Sbjct: 370 SPVLAPKQKDQVKDEPVDNSPAKQTPSGHARSTPPASKFKQKRKSGADDTKTSGGAASKK 429
Query: 243 XXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQD 416
+ VTE+EIRSVLLA APVTTQD
Sbjct: 430 AKVESDTKASGIKEEAPASAKPTSKTSASSKSGTNVSPVTEDEIRSVLLAVAPVTTQD 487
>gb|KQK89381.1| hypothetical protein SETIT_034500mg [Setaria italica]
Length = 691
Score = 67.4 bits (163), Expect = 3e-10
Identities = 45/118 (38%), Positives = 49/118 (41%)
Frame = +3
Query: 63 SPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTPXXXXXXXXXXXXXDXXXXXXXXXXXX 242
SPVLAPKQKD KDEP DNSP+K TP+G AR TP D
Sbjct: 530 SPVLAPKQKDQVKDEPVDNSPAKQTPSGHARSTPPASKFKQKRKSGADDTKTSGGAASKK 589
Query: 243 XXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQD 416
+ VTE+EIRSVLLA APVTTQD
Sbjct: 590 AKVESDTKASGIKEEAPASAKPTSKTSASSKSGTNVSPVTEDEIRSVLLAVAPVTTQD 647
>gb|KQK89382.1| hypothetical protein SETIT_034500mg [Setaria italica]
Length = 692
Score = 67.4 bits (163), Expect = 3e-10
Identities = 45/118 (38%), Positives = 49/118 (41%)
Frame = +3
Query: 63 SPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTPXXXXXXXXXXXXXDXXXXXXXXXXXX 242
SPVLAPKQKD KDEP DNSP+K TP+G AR TP D
Sbjct: 531 SPVLAPKQKDQVKDEPVDNSPAKQTPSGHARSTPPASKFKQKRKSGADDTKTSGGAASKK 590
Query: 243 XXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQD 416
+ VTE+EIRSVLLA APVTTQD
Sbjct: 591 AKVESDTKASGIKEEAPASAKPTSKTSASSKSGTNVSPVTEDEIRSVLLAVAPVTTQD 648
>ref|XP_020590941.1| transcription initiation factor IIF subunit alpha [Phalaenopsis
equestris]
Length = 528
Score = 66.6 bits (161), Expect = 5e-10
Identities = 48/122 (39%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Frame = +3
Query: 54 TVMSPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTP-XXXXXXXXXXXXXDXXXXXXXX 230
T +SPVLAPKQKD PKDEP DNSP+K +GSAR TP D
Sbjct: 368 TTISPVLAPKQKDAPKDEPADNSPAKQA-SGSARGTPSSSKSSKSKKKTGNDDGKSVTST 426
Query: 231 XXXXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTT 410
P +E VTEEEIR+VLLA APVTT
Sbjct: 427 PAKKETKPLSIKEESPSTFQAGAPSRGSSSTAARTAPVPSGPVTEEEIRAVLLAMAPVTT 486
Query: 411 QD 416
QD
Sbjct: 487 QD 488
>ref|XP_010928148.1| PREDICTED: transcription initiation factor IIF subunit alpha
[Elaeis guineensis]
Length = 537
Score = 66.6 bits (161), Expect = 5e-10
Identities = 49/125 (39%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Frame = +3
Query: 60 MSPVLAPKQKDGPKDEPTDNSPSK-TTPAGSARVTPXXXXXXXXXXXXXD-----XXXXX 221
MSPVLAPKQKD PKDEPTD+SPSK P GSAR TP +
Sbjct: 371 MSPVLAPKQKDTPKDEPTDSSPSKPVPPPGSARGTPAASKSSKTKRKSEEVKSSNGAPVK 430
Query: 222 XXXXXXXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAP 401
VK+E VTEEEIR+VLL+ AP
Sbjct: 431 KVKTDNDSKSSGVKDEPPSSTKSSAPAKGSSSTAARTGPTSSVAPVTEEEIRTVLLSVAP 490
Query: 402 VTTQD 416
VTTQD
Sbjct: 491 VTTQD 495
>ref|XP_015697454.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF
subunit alpha-like [Oryza brachyantha]
Length = 535
Score = 66.2 bits (160), Expect = 6e-10
Identities = 44/118 (37%), Positives = 49/118 (41%)
Frame = +3
Query: 63 SPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTPXXXXXXXXXXXXXDXXXXXXXXXXXX 242
SPVLAPKQKD KDEP DNSP+K TP+G AR TP D
Sbjct: 374 SPVLAPKQKDQTKDEPVDNSPAKPTPSGHARGTPPASKSKQKRKSGGDDTKATGGAASKK 433
Query: 243 XXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQD 416
+ VTE+EIR+VLLA APVTTQD
Sbjct: 434 AKVESDTKTSAAKDETPSSSKPASKATAASKTAANVSPVTEDEIRTVLLAVAPVTTQD 491
>ref|XP_023895578.1| transcription initiation factor IIF subunit alpha isoform X2
[Quercus suber]
Length = 536
Score = 66.2 bits (160), Expect = 6e-10
Identities = 43/120 (35%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +3
Query: 60 MSPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTP-XXXXXXXXXXXXXDXXXXXXXXXX 236
+SPVLAPKQKD PK+EP +NSP KT P+G+A+ TP D
Sbjct: 373 LSPVLAPKQKDAPKEEPAENSPLKTVPSGAAKGTPSSSKSAKSKRKLNGDDAKATSGAPP 432
Query: 237 XXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQD 416
VKEE VTE+EIR+VL+ PVTTQD
Sbjct: 433 KKELKSSVKEENVPTSKSTVPSKGTTSSLSKSASTSSAGPVTEDEIRAVLMQKTPVTTQD 492
>gb|OVA00393.1| Transcription initiation factor IIF [Macleaya cordata]
Length = 543
Score = 66.2 bits (160), Expect = 6e-10
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +3
Query: 60 MSPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTP 164
MSPVLAPKQKD PK+EP DNSPSKTTP+GSAR TP
Sbjct: 375 MSPVLAPKQKDAPKEEPVDNSPSKTTPSGSARGTP 409
>gb|AQK65935.1| Transcription initiation factor IIF, alpha subunit [Zea mays]
Length = 218
Score = 64.7 bits (156), Expect = 7e-10
Identities = 44/118 (37%), Positives = 48/118 (40%)
Frame = +3
Query: 63 SPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTPXXXXXXXXXXXXXDXXXXXXXXXXXX 242
SPVLAPKQKD KDEP D+SPSK P+G AR TP D
Sbjct: 57 SPVLAPKQKDQVKDEPVDSSPSKPAPSGHARGTPPASKSKQKRKSGVDDAKTSSGAASKK 116
Query: 243 XXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQD 416
+ VTE+EIRSVLLA APVTTQD
Sbjct: 117 AKVELDAKASGLKEEASSLAKPASKTSAASKSGTSVSPVTEDEIRSVLLAVAPVTTQD 174
>ref|XP_008811153.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Phoenix dactylifera]
Length = 258
Score = 64.7 bits (156), Expect = 1e-09
Identities = 48/127 (37%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Frame = +3
Query: 60 MSPVLAPKQKDGPKDEPTDNSPSK-TTPAGSARVTP-------XXXXXXXXXXXXXDXXX 215
MSPVLAPKQKD PKDEP D+SPSK P+GSAR TP +
Sbjct: 90 MSPVLAPKQKDTPKDEPADSSPSKPVPPSGSARSTPAASKSSKTKRKFGSEEVKSSNGAP 149
Query: 216 XXXXXXXXXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLAT 395
VK+E VTEEEIR+VLL+
Sbjct: 150 AKKVKMDNDSKSSGVKDEPPTSSKTSMPGKASSSTSARTGPTSSVAPVTEEEIRTVLLSV 209
Query: 396 APVTTQD 416
APVTTQD
Sbjct: 210 APVTTQD 216
>ref|XP_018842214.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X2 [Juglans regia]
Length = 533
Score = 65.5 bits (158), Expect = 1e-09
Identities = 45/120 (37%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Frame = +3
Query: 60 MSPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTP-XXXXXXXXXXXXXDXXXXXXXXXX 236
++PVLAPKQKD PK+EPT+NSP KT P+G AR TP D
Sbjct: 374 VTPVLAPKQKDAPKEEPTENSPVKTIPSGPARGTPSASKSAKAKRKLNGDDAKVSNAAPP 433
Query: 237 XXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVTTQD 416
P +KEE VTEEEIR+VL+ PVTTQD
Sbjct: 434 KKELKPSLKEE--TVPPPKSSVPSKATPSSKTGPTSSAGPVTEEEIRAVLIQKTPVTTQD 491
>gb|PNT29083.1| hypothetical protein POPTR_006G009100v3 [Populus trichocarpa]
Length = 395
Score = 65.1 bits (157), Expect = 1e-09
Identities = 47/126 (37%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Frame = +3
Query: 60 MSPVLAPKQKDG-PKDEPTDNSPSKTTPAGSARVTP------XXXXXXXXXXXXXDXXXX 218
+SPVLAPKQKD PK+EP DNSP+K TP GSA+ TP
Sbjct: 227 ISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNADDAKTSNGAP 286
Query: 219 XXXXXXXXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATA 398
P VKEE VTEEEIR+VLL
Sbjct: 287 VKKVKTENEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQNG 346
Query: 399 PVTTQD 416
PVTTQD
Sbjct: 347 PVTTQD 352
>gb|PNT29088.1| hypothetical protein POPTR_006G009100v3 [Populus trichocarpa]
Length = 527
Score = 65.1 bits (157), Expect = 2e-09
Identities = 47/126 (37%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Frame = +3
Query: 60 MSPVLAPKQKDG-PKDEPTDNSPSKTTPAGSARVTP------XXXXXXXXXXXXXDXXXX 218
+SPVLAPKQKD PK+EP DNSP+K TP GSA+ TP
Sbjct: 371 ISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNADDAKTSNGAP 430
Query: 219 XXXXXXXXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATA 398
P VKEE VTEEEIR+VLL
Sbjct: 431 VKKVKTENEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQNG 490
Query: 399 PVTTQD 416
PVTTQD
Sbjct: 491 PVTTQD 496
>ref|XP_020688104.1| transcription initiation factor IIF subunit alpha [Dendrobium
catenatum]
Length = 527
Score = 65.1 bits (157), Expect = 2e-09
Identities = 49/123 (39%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Frame = +3
Query: 54 TVMSPVLAPKQKDGPKDEPTDNSPSKTTPAGSARVTP--XXXXXXXXXXXXXDXXXXXXX 227
T +SPVLAPKQKD PKDEP DNSP+K +GSAR TP D
Sbjct: 367 TTISPVLAPKQKDAPKDEPADNSPAKPA-SGSARGTPSSSKSSKSKKKTGNDDGKPGAST 425
Query: 228 XXXXXXXXPYVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEEEIRSVLLATAPVT 407
+KEE VTE+EIRSVLLA APVT
Sbjct: 426 PAKKETKTSSIKEE-SPSTIQVGASSRGLSSAAARATPTPSGPVTEDEIRSVLLAMAPVT 484
Query: 408 TQD 416
TQD
Sbjct: 485 TQD 487