BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00016433
         (384 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020268472.1| protein RRP6-like 2 [Asparagus officinalis] ...    83   8e-16
ref|XP_020105187.1| protein RRP6-like 2 [Ananas comosus]               62   2e-08
gb|OAY82313.1| Protein RRP6-like 2 [Ananas comosus]                    62   2e-08
ref|XP_008789587.1| PREDICTED: protein RRP6-like 2 [Phoenix dact...    60   1e-07
gb|PKA57851.1| exosome complex exonuclease RRP6 [Apostasia shenz...    57   6e-07
ref|XP_010932653.1| PREDICTED: protein RRP6-like 2 isoform X2 [E...    57   1e-06
ref|XP_010932652.1| PREDICTED: protein RRP6-like 2 isoform X1 [E...    57   1e-06
ref|XP_019704952.1| PREDICTED: protein RRP6-like 2 isoform X2 [E...    56   1e-06

>ref|XP_020268472.1| protein RRP6-like 2 [Asparagus officinalis]
 gb|ONK68872.1| uncharacterized protein A4U43_C05F16920 [Asparagus officinalis]
          Length = 906

 Score = 82.8 bits (203), Expect = 8e-16
 Identities = 42/64 (65%), Positives = 48/64 (75%)
 Frame = -1

Query: 384  AARKNINFTGVGEHDGDVGLDSNPMDSGEKRRASALGRSNGEGGERGLRRQAFPPSGNRS 205
            AAR+NI F GV EH  D  LD+NP +S EKR+ S  GRS+GE   RGLRRQAFP SGNRS
Sbjct: 843  AARRNIEFGGVEEHFKDAELDNNPSESTEKRKGSDKGRSSGEERVRGLRRQAFPASGNRS 902

Query: 204  TTYK 193
            T+YK
Sbjct: 903  TSYK 906


>ref|XP_020105187.1| protein RRP6-like 2 [Ananas comosus]
          Length = 921

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 10/73 (13%)
 Frame = -1

Query: 384  AARKNINFTGVGEHDG------DVGLDSNPMDSGEKRRASALGRSNGE----GGERGLRR 235
            AARKNI F  +GE+DG      D G+ ++   +G+KR+ + +GR  GE      ++  RR
Sbjct: 848  AARKNIKFGNIGEYDGAKGDDDDDGVKASRDSAGDKRKGAPVGRGRGEEKGKSSQQPRRR 907

Query: 234  QAFPPSGNRSTTY 196
            QAFP SGNRSTTY
Sbjct: 908  QAFPLSGNRSTTY 920


>gb|OAY82313.1| Protein RRP6-like 2 [Ananas comosus]
          Length = 937

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 10/73 (13%)
 Frame = -1

Query: 384  AARKNINFTGVGEHDG------DVGLDSNPMDSGEKRRASALGRSNGE----GGERGLRR 235
            AARKNI F  +GE+DG      D G+ ++   +G+KR+ + +GR  GE      ++  RR
Sbjct: 864  AARKNIKFGNIGEYDGAKGDDDDDGVKASRDSAGDKRKGAPVGRGRGEEKGKSSQQPRRR 923

Query: 234  QAFPPSGNRSTTY 196
            QAFP SGNRSTTY
Sbjct: 924  QAFPLSGNRSTTY 936


>ref|XP_008789587.1| PREDICTED: protein RRP6-like 2 [Phoenix dactylifera]
          Length = 945

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 37/68 (54%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
 Frame = -1

Query: 384  AARKNINFTGVGEHDGDVGLDSNPM--DSGEKRRASALGRSNGE---GGERGLRRQAFPP 220
            AARKN+    VGE D     D  P   DSGE R+ S  G+S GE   G +   RRQAFPP
Sbjct: 877  AARKNMKVGEVGEKDRAESDDRLPTLPDSGELRKGSMFGQSRGEEVKGLQHPRRRQAFPP 936

Query: 219  SGNRSTTY 196
            SGNRSTTY
Sbjct: 937  SGNRSTTY 944


>gb|PKA57851.1| exosome complex exonuclease RRP6 [Apostasia shenzhenica]
          Length = 891

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
 Frame = -1

Query: 384  AARKNINFTGVGEHDGDVGLDSNPMDSGEKR---RASALGRSNGEGGERG---LRRQAFP 223
            AARK + F   GE DG    +S  MD  + R   + +   +SNGE  ERG   LRRQAFP
Sbjct: 822  AARKTVKFGEDGEEDGGEDGESR-MDLSKSRGPSKGAVSSKSNGERLERGRQPLRRQAFP 880

Query: 222  PSGNRSTTYK 193
            PSGNRSTTY+
Sbjct: 881  PSGNRSTTYR 890


>ref|XP_010932653.1| PREDICTED: protein RRP6-like 2 isoform X2 [Elaeis guineensis]
          Length = 946

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
 Frame = -1

Query: 384  AARKNINFTGVGEHD---GDVGLDSNPMDSGEKRRASALGRSNGE----GGERGLRRQAF 226
            AARKNI F  V E D   G+ GL + P DS E  +    G+S G+    G ++  RRQAF
Sbjct: 877  AARKNIKFGDVEEKDRAKGNDGLRTLP-DSREMHKGPVFGQSGGKERLKGFQQSRRRQAF 935

Query: 225  PPSGNRSTTY 196
            PPSGNRSTTY
Sbjct: 936  PPSGNRSTTY 945


>ref|XP_010932652.1| PREDICTED: protein RRP6-like 2 isoform X1 [Elaeis guineensis]
          Length = 954

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
 Frame = -1

Query: 384  AARKNINFTGVGEHD---GDVGLDSNPMDSGEKRRASALGRSNGE----GGERGLRRQAF 226
            AARKNI F  V E D   G+ GL + P DS E  +    G+S G+    G ++  RRQAF
Sbjct: 885  AARKNIKFGDVEEKDRAKGNDGLRTLP-DSREMHKGPVFGQSGGKERLKGFQQSRRRQAF 943

Query: 225  PPSGNRSTTY 196
            PPSGNRSTTY
Sbjct: 944  PPSGNRSTTY 953


>ref|XP_019704952.1| PREDICTED: protein RRP6-like 2 isoform X2 [Elaeis guineensis]
          Length = 331

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
 Frame = -1

Query: 384 AARKNINFTGVGEHD---GDVGLDSNPMDSGEKRRASALGRSNGEGGERGL----RRQAF 226
           AARKN+ F  VGE D    D  L ++ + SGE  +  A G+S GE   +G     RRQAF
Sbjct: 262 AARKNMKFGEVGEKDIAESDNRLQTSSV-SGEMHKGLASGQSRGEEKVKGFQHPRRRQAF 320

Query: 225 PPSGNRSTTY 196
           PPSGNRSTTY
Sbjct: 321 PPSGNRSTTY 330