BLASTX nr result

ID: Ophiopogon23_contig00016338 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00016338
         (746 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KRG92843.1| hypothetical protein GLYMA_20G233500 [Glycine max]      58   1e-06
gb|OAY66514.1| Protein YIPF [Ananas comosus]                           58   5e-06

>gb|KRG92843.1| hypothetical protein GLYMA_20G233500 [Glycine max]
          Length = 191

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -2

Query: 79  IYRYGPFWICTTLIFVAAAIGTFVTY 2
           +YRYGPFWICTTLIFVAA+IGTFVTY
Sbjct: 32  VYRYGPFWICTTLIFVAASIGTFVTY 57


>gb|OAY66514.1| Protein YIPF [Ananas comosus]
          Length = 335

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 30/47 (63%), Positives = 34/47 (72%)
 Frame = -2

Query: 142 LSDSCSCINLCILVSL*LLNYIYRYGPFWICTTLIFVAAAIGTFVTY 2
           +S+SC     C +  + LL    RYGPFWICTTLIFVAAAIGTFVTY
Sbjct: 160 ISNSC-----CFMAMIYLLQ---RYGPFWICTTLIFVAAAIGTFVTY 198


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