BLASTX nr result

ID: Ophiopogon23_contig00015042 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00015042
         (407 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020272734.1| glycine-rich domain-containing protein 1 [As...    56   3e-06
gb|ONK65372.1| uncharacterized protein A4U43_C07F36430 [Asparagu...    56   3e-06

>ref|XP_020272734.1| glycine-rich domain-containing protein 1 [Asparagus officinalis]
          Length = 736

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 1   DEEQFVLPTILLLFILKKEGYTGENIKQITSPEGET 108
           DE+QFVLP ILLLFILKKEG TG+NIKQ+ + E +T
Sbjct: 619 DEDQFVLPAILLLFILKKEGLTGKNIKQMANQESKT 654


>gb|ONK65372.1| uncharacterized protein A4U43_C07F36430 [Asparagus officinalis]
          Length = 811

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 1   DEEQFVLPTILLLFILKKEGYTGENIKQITSPEGET 108
           DE+QFVLP ILLLFILKKEG TG+NIKQ+ + E +T
Sbjct: 678 DEDQFVLPAILLLFILKKEGLTGKNIKQMANQESKT 713


Top