BLASTX nr result
ID: Ophiopogon23_contig00014512
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00014512
(757 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020276066.1| DNA repair protein UVH3 [Asparagus officinal... 169 3e-44
ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis g... 99 6e-20
ref|XP_018675319.1| PREDICTED: DNA repair protein UVH3 isoform X... 94 5e-18
ref|XP_018675317.1| PREDICTED: DNA repair protein UVH3 isoform X... 94 5e-18
ref|XP_018675318.1| PREDICTED: DNA repair protein UVH3 isoform X... 92 2e-17
gb|OVA03715.1| XPG/Rad2 endonuclease [Macleaya cordata] 65 4e-08
>ref|XP_020276066.1| DNA repair protein UVH3 [Asparagus officinalis]
gb|ONK63702.1| uncharacterized protein A4U43_C07F18000 [Asparagus officinalis]
Length = 1495
Score = 169 bits (429), Expect = 3e-44
Identities = 104/223 (46%), Positives = 124/223 (55%), Gaps = 1/223 (0%)
Frame = +3
Query: 3 EMEKHIQVSETTSELRRSTRCRKHVKYSEEKMDMEIDAHDQKDVAKEQESVEQGSSIRIG 182
E+EKHIQ E SELRRS R RKHV+Y+EE+M + +D D A++QE VEQG++IR
Sbjct: 1294 EIEKHIQEPEAMSELRRSKRRRKHVEYAEEEMHVGVDVDGSNDAAEKQEPVEQGNNIR-- 1351
Query: 183 PTGDASNHKEGSSCSPQVSLSRDYLLSGGGFCTDASEAQGDALRPAASPAINSAEKDSAA 362
T D S+ KEG + SP V LS DYL SGGGFC D SE QG
Sbjct: 1352 -TADGSDQKEGDNHSPDVGLSGDYLQSGGGFCVDESETQG-------------------- 1390
Query: 363 GDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFRMDESEIQGD-ATHVDAGSGKEDQER 539
+ LD Q HP L SHS D L GG F DE+E+Q D TH+DAGS K D+E
Sbjct: 1391 -----NTLDCQTGHPNMLTGNSHSGDCLLAGGGFCTDENEVQVDTTTHLDAGSAKADKEP 1445
Query: 540 YGRNTREPTGGNSLARMLMDSLYPXXXXXXXDGETNFSLKAMP 668
G +EPTGGNS A DS +GE N L+AMP
Sbjct: 1446 CGLTNKEPTGGNSRAIKHGDS--SCSEGAEDEGEINVGLRAMP 1486
>ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis guineensis]
Length = 1567
Score = 99.4 bits (246), Expect = 6e-20
Identities = 69/180 (38%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Frame = +3
Query: 9 EKHIQVSETTSELRRSTRCRKHVKYSEEKMDME--------IDAHDQKDVAKEQESVEQ- 161
E H +V SE+RRS R RKHVKY+E+ ++++ +D +D +VA E + E+
Sbjct: 1331 ESHTEVPAAKSEVRRSKRPRKHVKYAEDVLEVDELNVSSNQMDENDLHEVAVEHKLAEED 1390
Query: 162 -GSSIRIGPTGDASNHKEGSSCSPQVSLSRDYLLSGGGFCTDASEAQGDALRPAASPAIN 338
+IR +H E S LSRDYLL GGGFC D S+ QG A +P +
Sbjct: 1391 GNGTIRDSIPDIGGSHSEDS-------LSRDYLLRGGGFCADRSDEQGGAFQPGDGQMQD 1443
Query: 339 SAEKDSA-AGDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFRMDESEIQGDATHVDAG 515
SA KD G+ ++ LD P G+ S DY +GG F MDES++QG+A AG
Sbjct: 1444 SAGKDEDWVGE--AAGLDCGKESPLK---GNLSNDYLRSGGGFCMDESDLQGEAIQPAAG 1498
>ref|XP_018675319.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Musa acuminata subsp.
malaccensis]
Length = 1511
Score = 94.0 bits (232), Expect = 5e-18
Identities = 82/244 (33%), Positives = 112/244 (45%), Gaps = 23/244 (9%)
Frame = +3
Query: 3 EMEKHIQVSETTSELRRSTRCRKHVKYSEEKMDMEIDAHDQK---------DVAKEQESV 155
++E H +V E +L RS R K V+Y+EE D E+D + VA EQE +
Sbjct: 1275 QLENHSKVPEVLPKLHRSMRPLKQVQYAEE--DFEVDESNGTLNPSGSKLLGVATEQEPI 1332
Query: 156 EQGSSIRIGPTGDASNHKEGSSCSPQVSLSRDYLLSGGGFCTDASEAQGDALRPAASPAI 335
E + R+G D S+ +G+ + S S +YL SGGGFC D + QGDA++ AASP
Sbjct: 1333 ENDNRSRVG---DLSDVDKGAHTFSKDSSSGEYLFSGGGFCLDDNVLQGDAIQLAASPIQ 1389
Query: 336 NSAEKDSAAGDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFRMDESEIQGDATHVDAG 515
SAE D DR +L D + S+ Y +GG F MDES+ Q DAT
Sbjct: 1390 GSAEMDRE---------DRDGCKQHALEDDT-SRGYLFSGGGFCMDESDEQVDATR--PT 1437
Query: 516 SGKEDQERYGRNTRE-------------PTGGNSLARMLMD-SLYPXXXXXXXDGETNFS 653
S + + R R T + P + L D SL DG++N
Sbjct: 1438 SSQIENSRPSRVTSDISDDPQKFSGHSVPDDMKKTSEPLQDSSLLVENITSFQDGQSNLG 1497
Query: 654 LKAM 665
L AM
Sbjct: 1498 LSAM 1501
>ref|XP_018675317.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 1576
Score = 94.0 bits (232), Expect = 5e-18
Identities = 82/244 (33%), Positives = 112/244 (45%), Gaps = 23/244 (9%)
Frame = +3
Query: 3 EMEKHIQVSETTSELRRSTRCRKHVKYSEEKMDMEIDAHDQK---------DVAKEQESV 155
++E H +V E +L RS R K V+Y+EE D E+D + VA EQE +
Sbjct: 1340 QLENHSKVPEVLPKLHRSMRPLKQVQYAEE--DFEVDESNGTLNPSGSKLLGVATEQEPI 1397
Query: 156 EQGSSIRIGPTGDASNHKEGSSCSPQVSLSRDYLLSGGGFCTDASEAQGDALRPAASPAI 335
E + R+G D S+ +G+ + S S +YL SGGGFC D + QGDA++ AASP
Sbjct: 1398 ENDNRSRVG---DLSDVDKGAHTFSKDSSSGEYLFSGGGFCLDDNVLQGDAIQLAASPIQ 1454
Query: 336 NSAEKDSAAGDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFRMDESEIQGDATHVDAG 515
SAE D DR +L D + S+ Y +GG F MDES+ Q DAT
Sbjct: 1455 GSAEMDRE---------DRDGCKQHALEDDT-SRGYLFSGGGFCMDESDEQVDATR--PT 1502
Query: 516 SGKEDQERYGRNTRE-------------PTGGNSLARMLMD-SLYPXXXXXXXDGETNFS 653
S + + R R T + P + L D SL DG++N
Sbjct: 1503 SSQIENSRPSRVTSDISDDPQKFSGHSVPDDMKKTSEPLQDSSLLVENITSFQDGQSNLG 1562
Query: 654 LKAM 665
L AM
Sbjct: 1563 LSAM 1566
>ref|XP_018675318.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 1534
Score = 92.4 bits (228), Expect = 2e-17
Identities = 67/175 (38%), Positives = 91/175 (52%), Gaps = 9/175 (5%)
Frame = +3
Query: 3 EMEKHIQVSETTSELRRSTRCRKHVKYSEEKMDMEIDAHDQK---------DVAKEQESV 155
++E H +V E +L RS R K V+Y+EE D E+D + VA EQE +
Sbjct: 1340 QLENHSKVPEVLPKLHRSMRPLKQVQYAEE--DFEVDESNGTLNPSGSKLLGVATEQEPI 1397
Query: 156 EQGSSIRIGPTGDASNHKEGSSCSPQVSLSRDYLLSGGGFCTDASEAQGDALRPAASPAI 335
E + R+G D S+ +G+ + S S +YL SGGGFC D + QGDA++ AASP
Sbjct: 1398 ENDNRSRVG---DLSDVDKGAHTFSKDSSSGEYLFSGGGFCLDDNVLQGDAIQLAASPIQ 1454
Query: 336 NSAEKDSAAGDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFRMDESEIQGDAT 500
SAE D DR +L D + S+ Y +GG F MDES+ Q DAT
Sbjct: 1455 GSAEMDRE---------DRDGCKQHALEDDT-SRGYLFSGGGFCMDESDEQVDAT 1499
>gb|OVA03715.1| XPG/Rad2 endonuclease [Macleaya cordata]
Length = 1570
Score = 64.7 bits (156), Expect = 4e-08
Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 6/178 (3%)
Frame = +3
Query: 3 EMEKHIQVSETTSELRRSTRCRKHVKYSEEKMDMEI--DAHD-QKDVAKEQESVEQGSSI 173
E++ +++E ++E+RRS R RKHVKY+ ++ ++ D+ D Q D + +VEQ + +
Sbjct: 1337 ELKMQDEITERSTEVRRSKRPRKHVKYTGNDVEADVMSDSSDHQNDGNCKDGAVEQETFL 1396
Query: 174 ---RIGPTGDASNHKEGSSCSPQVSLSRDYLLSGGGFCTDASEAQGDALRPAASPAINSA 344
G GSS Q +LSRDYL GGGFCTD +GD
Sbjct: 1397 GEEMFGGVAHGVTEVVGSS-PLQDALSRDYLGMGGGFCTD----EGD------------P 1439
Query: 345 EKDSAAGDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFRMDESEIQGDATHVDAGS 518
E + S L+ +P +L DG S+DY GG F MDE E Q D +++ S
Sbjct: 1440 ESELVPDQTRDSDLNHGNGNP-ALKDG-FSRDYLKMGGGFCMDEDE-QADNNTIESVS 1494