BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00014349
         (581 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposo...   164   1e-46
ref|XP_014629594.1| PREDICTED: uncharacterized protein LOC106798...   157   1e-41
gb|KYP73871.1| Retrovirus-related Pol polyprotein from transposo...   150   3e-41
gb|PHT97140.1| hypothetical protein BC332_33933 [Capsicum chinense]   147   5e-40
gb|KYP46750.1| Retrovirus-related Pol polyprotein from transposo...   143   2e-39
gb|KYP56549.1| Retrovirus-related Pol polyprotein from transposo...   140   6e-39
gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [...   150   1e-38
gb|ABF95685.1| retrotransposon protein, putative, Ty1-copia subc...   150   1e-38
gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subc...   150   1e-38
gb|ADB85311.1| putative retrotransposon protein [Phyllostachys e...   144   2e-38
gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japo...   150   2e-38
gb|ABA98225.1| retrotransposon protein, putative, Ty1-copia subc...   150   2e-38
gb|AAS01944.1| putative retrotransposon protein [Oryza sativa Ja...   149   4e-38
gb|ABA96256.1| retrotransposon protein, putative, Ty1-copia subc...   146   6e-38
emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group]         149   6e-38
dbj|BAB03249.1| polyprotein [Oryza sativa]                            149   6e-38
gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subc...   149   6e-38
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo...   149   6e-38
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa...   149   6e-38
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc...   149   6e-38

>gb|KYP73716.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 304

 Score =  164 bits (415), Expect = 1e-46
 Identities = 86/158 (54%), Positives = 108/158 (68%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513 HNIDKILNKFNFHDFKFVFTPYDSFVSLKKNDGESVS-----QLIGSLLYISNRISLDIA 349
           H I+KIL KFN+ D K V TP+D  + LKKN GESVS     Q+IGSLL++SN    DIA
Sbjct: 58  HYIEKILKKFNYFDVKPVSTPFDPSIKLKKNIGESVSPLKYSQIIGSLLHLSNFSRPDIA 117

Query: 348 YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
           YA GRL RYT NPD  + +ALER+F+YLK TV+Y + Y  Y   IEG+ D NW+ D++  
Sbjct: 118 YAVGRLGRYTHNPDHSHWLALERLFRYLKGTVNYGIHYACYPVVIEGFCDANWISDSDET 177

Query: 168 KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
           KS +GYVF  +   V  KS KQT+ +RS MEAE+I LD
Sbjct: 178 KSTSGYVFTLAGGAVAWKSAKQTIISRSTMEAEIIALD 215


>ref|XP_014629594.1| PREDICTED: uncharacterized protein LOC106798148 [Glycine max]
          Length = 612

 Score =  157 bits (397), Expect = 1e-41
 Identities = 79/158 (50%), Positives = 107/158 (67%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513 HNIDKILNKFNFHDFKFVFTPYDSFVSLKKNDGESVS-----QLIGSLLYISNRISLDIA 349
           H ++K+L KFN+ D K V TPYDS + LKKN  + +S     Q+IGSLL+ +N    DIA
Sbjct: 425 HYVEKLLKKFNYFDVKPVSTPYDSSIKLKKNLDKGISSHKYSQIIGSLLHFTNFSRPDIA 484

Query: 348 YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
           YA GRL RYT+NPD  + IALER+F+YLK T++Y + YT +   IEG++D NW+ D++  
Sbjct: 485 YAVGRLGRYTNNPDHSHWIALERVFRYLKGTINYGIHYTCFPAVIEGFSDANWISDSDET 544

Query: 168 KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
           KS +GYVF  +   V  KS KQT+ +   MEAE+I LD
Sbjct: 545 KSTSGYVFTLAGGAVSWKSAKQTIISHFTMEAEIIALD 582


>gb|KYP73871.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 314

 Score =  150 bits (380), Expect = 3e-41
 Identities = 78/158 (49%), Positives = 106/158 (67%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513 HNIDKILNKFNFHDFKFVFTPYDSFVSLKKNDGESVS-----QLIGSLLYISNRISLDIA 349
           H I+K+L KFN+ D K V T +DS + LKKN GESVS     Q+ GSLL++SN    DIA
Sbjct: 54  HYIEKLLRKFNYFDVKPVSTSFDSSIKLKKNIGESVSPLKYSQITGSLLHLSNFSRSDIA 113

Query: 348 YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
           Y  GRL RYT NPD  + + LER+F+YLK T++Y + Y  Y   ++G++D+NW+ D++  
Sbjct: 114 YVIGRLGRYTHNPDHLHWLTLERLFRYLKGTINYGIHYAYYHVVVKGFSDVNWIFDSDET 173

Query: 168 KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
           KS +GYVF  +   V  KS KQT+ +R  MEAE+I LD
Sbjct: 174 KSTSGYVFTLTRGAVAWKSAKQTI-SRFTMEAEIIALD 210


>gb|PHT97140.1| hypothetical protein BC332_33933 [Capsicum chinense]
          Length = 305

 Score =  147 bits (371), Expect = 5e-40
 Identities = 77/158 (48%), Positives = 102/158 (64%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513 HNIDKILNKFNFHDFKFVFTPYDSFVSLKKNDGESVSQL-----IGSLLYISNRISLDIA 349
           H I+K+L+KF + +F    TP D+  +L+KN+GES SQL     +  L+YI N I  DIA
Sbjct: 36  HYIEKVLDKFKYMEFGIAKTPLDASFALRKNEGESDSQLEYARVLRCLMYIINCIRPDIA 95

Query: 348 YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            A  +LSRYTSNP K + +A++R+  YLKYT +Y L Y  Y   +EGY+D NW+  +N V
Sbjct: 96  CAISKLSRYTSNPSKTHWMAIKRVLGYLKYTQNYALHYNKYPAVLEGYSDTNWITGSNEV 155

Query: 168 KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
           KSI+GY F      V  KS KQT  ARS+ME+E I LD
Sbjct: 156 KSISGYEFTIGGGAVSWKSSKQTCIARSLMESEFIALD 193


>gb|KYP46750.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 219

 Score =  143 bits (361), Expect = 2e-39
 Identities = 74/149 (49%), Positives = 98/149 (65%), Gaps = 5/149 (3%)
 Frame = -3

Query: 486 FNFHDFKFVFTPYDSFVSLKKNDGESV-----SQLIGSLLYISNRISLDIAYAAGRLSRY 322
           FN+ D K V T +D  + LKKN GESV     SQ+IGSLL++SN    DIAY  GRL RY
Sbjct: 2   FNYFDVKPVSTLFDFNIKLKKNIGESVFPFKYSQIIGSLLHLSNYSRPDIAYVVGRLGRY 61

Query: 321 TSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNVKSITGYVFL 142
           T NPD  + + LER+FKYLK T++Y + Y  Y   IEG++D NW+ D++  KS +GYVF 
Sbjct: 62  THNPDHSHWLTLERLFKYLKGTINYGIHYACYPIVIEGFSDANWISDSDETKSTSGYVFT 121

Query: 141 YSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            +   +  K  KQT+ +RS MEA++I LD
Sbjct: 122 LAGGAITWKFAKQTIISRSTMEAKIIALD 150


>gb|KYP56549.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 168

 Score =  140 bits (353), Expect = 6e-39
 Identities = 72/141 (51%), Positives = 94/141 (66%), Gaps = 5/141 (3%)
 Frame = -3

Query: 513 HNIDKILNKFNFHDFKFVFTPYDSFVSLKKNDGESVS-----QLIGSLLYISNRISLDIA 349
           H I+K+L KFN+ D K V TP+D  + LKKN GESVS     Q+IGSLL++SN    DIA
Sbjct: 28  HYIEKLLKKFNYFDVKPVSTPFDPSIKLKKNIGESVSPLKYSQIIGSLLHLSNFSRPDIA 87

Query: 348 YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
           Y  GRL RYT NPD  + +ALER+F+YLK T++Y + Y  Y   IEG++D NW+ D++  
Sbjct: 88  YVVGRLGRYTHNPDHSHWLALERLFRYLKGTINYGIHYACYPVVIEGFSDANWISDSDET 147

Query: 168 KSITGYVFLYSSAVVL*KSCK 106
           KS +GYVF  +   V  KS K
Sbjct: 148 KSTSGYVFTLAGGAVPWKSVK 168


>gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [Oryza sativa Japonica Group]
          Length = 804

 Score =  150 bits (380), Expect = 1e-38
 Identities = 75/158 (47%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513  HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
            H +DK+L++F + D K   TPYD  V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 543  HYVDKVLSRFGYSDCKPAPTPYDPNVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDIS 602

Query: 348  YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            +A  +LSR+ SNP  ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DAN +
Sbjct: 603  FAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDANEI 662

Query: 168  KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            K+I+GY F      V  KSCKQT+  RS MEAEL  LD
Sbjct: 663  KAISGYAFTLGGGAVSWKSCKQTILTRSTMEAELTALD 700


>gb|ABF95685.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1061

 Score =  150 bits (380), Expect = 1e-38
 Identities = 75/158 (47%), Positives = 104/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513  HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
            H +DK+L++F + D K   TPYDS V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 873  HYVDKVLSRFGYSDCKPAPTPYDSSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDIS 932

Query: 348  YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            +A  +LSR+ SNP  ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DA+ +
Sbjct: 933  FAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEI 992

Query: 168  KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            K+ +GYVF      V  KSCKQT+  RS MEAEL  LD
Sbjct: 993  KATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALD 1030


>gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1457

 Score =  150 bits (380), Expect = 1e-38
 Identities = 75/158 (47%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513  HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
            H +DK+L++F + D K   TPYD  V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 1196 HYVDKVLSRFGYSDCKPAPTPYDPNVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDIS 1255

Query: 348  YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            +A  +LSR+ SNP  ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DAN +
Sbjct: 1256 FAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDANEI 1315

Query: 168  KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            K+I+GY F      V  KSCKQT+  RS MEAEL  LD
Sbjct: 1316 KAISGYAFTLGGGAVSWKSCKQTILTRSTMEAELTALD 1353


>gb|ADB85311.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 350

 Score =  144 bits (363), Expect = 2e-38
 Identities = 71/158 (44%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513 HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
           H ++K+L+ F + D+K   TP+D  V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 186 HYVEKVLSHFGYSDYKSSPTPHDPNVLLRKNRRIARDQLRYSQIIGSLMYLASGTRPDIS 245

Query: 348 YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
           +A  +LSR+ SNP  ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ D + +
Sbjct: 246 FAMSKLSRFVSNPGDDHWHALERVMRYLKGTMSYSIHYTGYPRVLEGYSDSNWISDVDEI 305

Query: 168 KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
           K+ +GYVF+     V  KSCKQT+  RS MEAEL  LD
Sbjct: 306 KATSGYVFILGGGAVSWKSCKQTILTRSTMEAELTELD 343


>gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japonica Group]
          Length = 1028

 Score =  150 bits (378), Expect = 2e-38
 Identities = 74/158 (46%), Positives = 104/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513  HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
            H +DK+L++F + D K   TPYD  V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 767  HYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDIS 826

Query: 348  YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            +A  +LSR+ SNP+ ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DA+ +
Sbjct: 827  FAVSKLSRFVSNPEDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEI 886

Query: 168  KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            K+ +GYVF      V  KSCKQT+  RS MEAEL  LD
Sbjct: 887  KATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALD 924


>gb|ABA98225.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1199

 Score =  150 bits (378), Expect = 2e-38
 Identities = 74/158 (46%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513  HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
            H +DK+L++F + D K   TPYD  + L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 938  HYVDKVLSRFGYSDCKPAPTPYDPSMLLRKNRRIARDQLRYSQIIGSLMYLASTTRPDIS 997

Query: 348  YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            +A  +LSR+ SNP  +Y  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DA+ +
Sbjct: 998  FAVSKLSRFVSNPGDDYWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWICDADEI 1057

Query: 168  KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            K+ +GYVF      V  KSCKQT+  RS MEAEL  LD
Sbjct: 1058 KATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALD 1095


>gb|AAS01944.1| putative retrotransposon protein [Oryza sativa Japonica Group]
 gb|ABF97221.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 710

 Score =  149 bits (375), Expect = 4e-38
 Identities = 74/158 (46%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513 HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
           H +DK+L++F + D K   TPYD  V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 521 HYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDIS 580

Query: 348 YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
           +A  +LSR+ SNP  ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DA+ +
Sbjct: 581 FAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEI 640

Query: 168 KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
           K+ +GYVF      V  KSCKQT+  RS MEAEL  LD
Sbjct: 641 KATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALD 678


>gb|ABA96256.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 506

 Score =  146 bits (368), Expect = 6e-38
 Identities = 73/158 (46%), Positives = 101/158 (63%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513 HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
           H +DK+L++F + D K   TPYD  V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 288 HYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIVRDQLRYSQIIGSLIYLASATRPDIS 347

Query: 348 YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
           +A  +LSR+ SNP  ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DA+ +
Sbjct: 348 FAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEI 407

Query: 168 KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
           K  +GYVF      V  KSCKQT+  RS ME EL  LD
Sbjct: 408 KVTSGYVFTLGGGAVSWKSCKQTILTRSTMEVELTALD 445


>emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group]
          Length = 1183

 Score =  149 bits (375), Expect = 6e-38
 Identities = 75/158 (47%), Positives = 101/158 (63%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513  HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
            H +DKIL+ F + D K   TPYD  V L+KN     D    SQ+IGSL+Y++N    DI+
Sbjct: 922  HYVDKILSCFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLANATRPDIS 981

Query: 348  YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            +A  +LSR+ SNP  ++   LER+ +YLK T+ Y + YTGY   +EGY+D NW+ DA+ +
Sbjct: 982  FAVSKLSRFVSNPGDDHWQTLERVMRYLKGTMSYAIHYTGYPKVLEGYSDSNWISDADEI 1041

Query: 168  KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            K+ +GYVF      V  KSCKQT+  RS MEAEL  LD
Sbjct: 1042 KATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALD 1079


>dbj|BAB03249.1| polyprotein [Oryza sativa]
          Length = 1268

 Score =  149 bits (375), Expect = 6e-38
 Identities = 74/158 (46%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513  HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
            H +DK+L++F + D K   TPYD  V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 1007 HYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDIS 1066

Query: 348  YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            +A  +LSR+ SNP  ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DA+ +
Sbjct: 1067 FAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEI 1126

Query: 168  KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            K+ +GYVF      V  KSCKQT+  RS MEAEL  LD
Sbjct: 1127 KATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALD 1164


>gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1357

 Score =  149 bits (375), Expect = 6e-38
 Identities = 74/158 (46%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513  HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
            H +DK+L++F + D K   TPYD  V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 1096 HYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDIS 1155

Query: 348  YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            +A  +LSR+ SNP  ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DA+ +
Sbjct: 1156 FAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEI 1215

Query: 168  KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            K+ +GYVF      V  KSCKQT+  RS MEAEL  LD
Sbjct: 1216 KATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALD 1253


>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1394

 Score =  149 bits (375), Expect = 6e-38
 Identities = 74/158 (46%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513  HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
            H +DK+L++F + D K   TPYD  V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 1133 HYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDIS 1192

Query: 348  YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            +A  +LSR+ SNP  ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DA+ +
Sbjct: 1193 FAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEI 1252

Query: 168  KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            K+ +GYVF      V  KSCKQT+  RS MEAEL  LD
Sbjct: 1253 KATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALD 1290


>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1408

 Score =  149 bits (375), Expect = 6e-38
 Identities = 74/158 (46%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513  HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
            H +DK+L++F + D K   TPYD  V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 1147 HYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDIS 1206

Query: 348  YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            +A  +LSR+ SNP  ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DA+ +
Sbjct: 1207 FAVSKLSRFVSNPGDDHWRALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEI 1266

Query: 168  KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            K+ +GYVF      V  KSCKQT+  RS MEAEL  LD
Sbjct: 1267 KATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALD 1304


>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1413

 Score =  149 bits (375), Expect = 6e-38
 Identities = 74/158 (46%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
 Frame = -3

Query: 513  HNIDKILNKFNFHDFKFVFTPYDSFVSLKKN-----DGESVSQLIGSLLYISNRISLDIA 349
            H +DK+L++F + D K   TPYD  V L+KN     D    SQ+IGSL+Y+++    DI+
Sbjct: 1152 HYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDIS 1211

Query: 348  YAAGRLSRYTSNPDKEYCIALERIFKYLKYTVDYCLTYTGYSDAIEGYNDINWVIDANNV 169
            +A  +LSR+ SNP  ++  ALER+ +YLK T+ Y + YTGY   +EGY+D NW+ DA+ +
Sbjct: 1212 FAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDADEI 1271

Query: 168  KSITGYVFLYSSAVVL*KSCKQTVTARSIMEAELIVLD 55
            K+ +GYVF      V  KSCKQT+  RS MEAEL  LD
Sbjct: 1272 KATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALD 1309