BLASTX nr result

ID: Ophiopogon23_contig00013795 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00013795
         (607 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OVA05723.1| WD40 repeat [Macleaya cordata]                          56   9e-06

>gb|OVA05723.1| WD40 repeat [Macleaya cordata]
          Length = 501

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = +1

Query: 466 DTRLQSADSDVCSISMMLILNALYRKVFAVDWSPDGEKVASGGKDRV 606
           D+RL  + S   ++ + ++L + + KVFAVDWSPDGEKVASGG+DRV
Sbjct: 450 DSRLLLSGSKDSTLKVHILLISSFEKVFAVDWSPDGEKVASGGRDRV 496


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