BLASTX nr result
ID: Ophiopogon23_contig00013767
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00013767
(561 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009392295.1| PREDICTED: pentatricopeptide repeat-containi... 104 2e-22
ref|XP_010936694.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-22
gb|OAY68833.1| Pentatricopeptide repeat-containing protein [Anan... 102 8e-22
ref|XP_020083063.1| pentatricopeptide repeat-containing protein ... 102 8e-22
ref|XP_008784899.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-20
gb|PKU86954.1| Pentatricopeptide repeat-containing protein [Dend... 96 1e-19
ref|XP_020678153.1| pentatricopeptide repeat-containing protein ... 96 1e-19
ref|XP_020678152.1| pentatricopeptide repeat-containing protein ... 96 1e-19
gb|PKA53886.1| Pentatricopeptide repeat-containing protein [Apos... 92 2e-18
ref|XP_020594636.1| pentatricopeptide repeat-containing protein ... 85 2e-16
gb|ACF86870.1| unknown [Zea mays] 79 1e-15
gb|PAN52502.1| hypothetical protein PAHAL_J01587 [Panicum hallii] 82 2e-15
ref|XP_020273449.1| LOW QUALITY PROTEIN: pentatricopeptide repea... 83 4e-15
ref|XP_010257719.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE ... 83 4e-15
ref|XP_015884644.1| PREDICTED: putative pentatricopeptide repeat... 83 5e-15
ref|XP_004953069.1| pentatricopeptide repeat-containing protein ... 82 7e-15
gb|PAN06997.1| hypothetical protein PAHAL_A02503 [Panicum hallii] 82 7e-15
gb|OEL27153.1| Pentatricopeptide repeat-containing protein [Dich... 82 1e-14
ref|XP_010060957.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-14
ref|XP_002452434.1| pentatricopeptide repeat-containing protein ... 79 8e-14
>ref|XP_009392295.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Musa acuminata subsp. malaccensis]
Length = 710
Score = 104 bits (259), Expect = 2e-22
Identities = 52/87 (59%), Positives = 64/87 (73%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
CDMY+R EKARKSLKILE KLLRADQ E I+SGLL GG++ +AK +YD MQS G
Sbjct: 621 CDMYSRAHQLEKARKSLKILEARSKLLRADQLERIISGLLAGGLLEDAKRIYDCMQSQGL 680
Query: 181 SPSESVRVAIMASQSFAQHKLPVTR*G 261
+PSE +RVA++A+QS + K P R G
Sbjct: 681 APSEPIRVALLAAQSIRRQKSPTRRGG 707
>ref|XP_010936694.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06920
[Elaeis guineensis]
Length = 705
Score = 103 bits (258), Expect = 2e-22
Identities = 52/80 (65%), Positives = 64/80 (80%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
CDMY+R EKARKSLKILE K+LLRADQFE IVSGLL GG+V +AK +Y+SM++ GF
Sbjct: 618 CDMYSRAQQGEKARKSLKILEARKQLLRADQFERIVSGLLAGGLVEDAKRIYNSMEARGF 677
Query: 181 SPSESVRVAIMASQSFAQHK 240
SPSE RVA+MA++S + K
Sbjct: 678 SPSEPTRVALMAAKSIPRQK 697
>gb|OAY68833.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 704
Score = 102 bits (254), Expect = 8e-22
Identities = 51/85 (60%), Positives = 67/85 (78%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
CDMYAR +EK RKS+KILEG K++L+ADQFE ++SGLL GG V +AK M+ MQ+ GF
Sbjct: 618 CDMYARAKQEEKLRKSMKILEGRKQMLKADQFERVISGLLAGGFVQDAKRMHGLMQARGF 677
Query: 181 SPSESVRVAIMASQSFAQHKLPVTR 255
+PSESVRVA+MA+QS + + P +R
Sbjct: 678 APSESVRVALMAAQSIPRPR-PASR 701
>ref|XP_020083063.1| pentatricopeptide repeat-containing protein At1g64100 [Ananas
comosus]
Length = 705
Score = 102 bits (254), Expect = 8e-22
Identities = 51/85 (60%), Positives = 67/85 (78%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
CDMYAR +EK RKS+KILEG K++L+ADQFE ++SGLL GG V +AK M+ MQ+ GF
Sbjct: 619 CDMYARAKQEEKLRKSMKILEGRKQMLKADQFERVISGLLAGGFVQDAKRMHGLMQARGF 678
Query: 181 SPSESVRVAIMASQSFAQHKLPVTR 255
+PSESVRVA+MA+QS + + P +R
Sbjct: 679 APSESVRVALMAAQSIPRPR-PASR 702
>ref|XP_008784899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial [Phoenix dactylifera]
Length = 705
Score = 99.0 bits (245), Expect = 1e-20
Identities = 50/80 (62%), Positives = 61/80 (76%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
CDMY+R EK RKSLKILE KKLLRADQFE IVSGLL GG V +AK + ++M++ GF
Sbjct: 618 CDMYSRAQQGEKVRKSLKILEARKKLLRADQFERIVSGLLAGGFVEDAKRINNAMEARGF 677
Query: 181 SPSESVRVAIMASQSFAQHK 240
+PSE RVA+MA+QS + K
Sbjct: 678 TPSEPTRVALMAAQSIPRQK 697
>gb|PKU86954.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 698
Score = 95.9 bits (237), Expect = 1e-19
Identities = 43/80 (53%), Positives = 63/80 (78%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
C+MY+R GN++KAR+SLKILEG K +++ DQFE +VSGL+ G ++ +A +YD MQ GF
Sbjct: 608 CEMYSRAGNEQKARQSLKILEGRKNVMKGDQFERVVSGLVAGRLLNDAMRLYDVMQERGF 667
Query: 181 SPSESVRVAIMASQSFAQHK 240
+ SESV+V +MA+QS +H+
Sbjct: 668 TLSESVKVGLMAAQSIPRHE 687
>ref|XP_020678153.1| pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X2 [Dendrobium catenatum]
ref|XP_020678154.1| pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X3 [Dendrobium catenatum]
Length = 698
Score = 95.9 bits (237), Expect = 1e-19
Identities = 43/80 (53%), Positives = 63/80 (78%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
C+MY+R GN++KAR+SLKILEG K +++ DQFE +VSGL+ G ++ +A +YD MQ GF
Sbjct: 608 CEMYSRAGNEQKARQSLKILEGRKNVMKGDQFERVVSGLVAGRLLNDAMRLYDVMQERGF 667
Query: 181 SPSESVRVAIMASQSFAQHK 240
+ SESV+V +MA+QS +H+
Sbjct: 668 TLSESVKVGLMAAQSIPRHE 687
>ref|XP_020678152.1| pentatricopeptide repeat-containing protein At1g74850,
chloroplastic isoform X1 [Dendrobium catenatum]
Length = 698
Score = 95.9 bits (237), Expect = 1e-19
Identities = 43/80 (53%), Positives = 63/80 (78%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
C+MY+R GN++KAR+SLKILEG K +++ DQFE +VSGL+ G ++ +A +YD MQ GF
Sbjct: 608 CEMYSRAGNEQKARQSLKILEGRKNVMKGDQFERVVSGLVAGRLLNDAMRLYDVMQERGF 667
Query: 181 SPSESVRVAIMASQSFAQHK 240
+ SESV+V +MA+QS +H+
Sbjct: 668 TLSESVKVGLMAAQSIPRHE 687
>gb|PKA53886.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 716
Score = 92.4 bits (228), Expect = 2e-18
Identities = 43/74 (58%), Positives = 56/74 (75%)
Frame = +1
Query: 4 DMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGFS 183
DMY+R GNK+KA + KIL+G K LL+ADQFE IV GLL G + +AK MYD M GF+
Sbjct: 619 DMYSRAGNKKKAHEFFKILQGRKNLLKADQFERIVRGLLDRGFLNDAKKMYDEMHERGFA 678
Query: 184 PSESVRVAIMASQS 225
PSES+++ +MA+QS
Sbjct: 679 PSESIKITLMAAQS 692
>ref|XP_020594636.1| pentatricopeptide repeat-containing protein At1g19525-like, partial
[Phalaenopsis equestris]
Length = 293
Score = 85.1 bits (209), Expect = 2e-16
Identities = 38/80 (47%), Positives = 59/80 (73%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
CDMY+R G ++ AR+SLKILEG K ++ DQFE ++ GL+ ++ +AK + D+M+ GF
Sbjct: 203 CDMYSRAGKEQNARQSLKILEGRKDVMTGDQFERVMGGLVAARLLNDAKRVSDAMEERGF 262
Query: 181 SPSESVRVAIMASQSFAQHK 240
+ SESV+V +MA+QS +H+
Sbjct: 263 TLSESVKVGLMAAQSIPRHQ 282
>gb|ACF86870.1| unknown [Zea mays]
Length = 120
Score = 79.0 bits (193), Expect = 1e-15
Identities = 37/71 (52%), Positives = 51/71 (71%)
Frame = +1
Query: 4 DMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGFS 183
DMYA+ ++KAR+SLKILE KKLL++DQFE ++ GL+ GG EA Y M+S GF
Sbjct: 38 DMYAKSSQEDKARRSLKILEEKKKLLKSDQFERVIRGLVDGGFSEEANKFYKMMKSCGFE 97
Query: 184 PSESVRVAIMA 216
PS+++ VA+ A
Sbjct: 98 PSKTIEVAVKA 108
>gb|PAN52502.1| hypothetical protein PAHAL_J01587 [Panicum hallii]
Length = 311
Score = 82.4 bits (202), Expect = 2e-15
Identities = 42/72 (58%), Positives = 51/72 (70%)
Frame = +1
Query: 4 DMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGFS 183
DMYA+ +EKAR+SLKILE KKLL+ADQFE I+ GLL GG EA Y M+S G
Sbjct: 227 DMYAKSRQEEKARRSLKILEEKKKLLKADQFERIIRGLLDGGFSEEANKYYKMMKSCGLQ 286
Query: 184 PSESVRVAIMAS 219
PSE++ VA+ AS
Sbjct: 287 PSETIEVAVKAS 298
>ref|XP_020273449.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
At1g01970-like [Asparagus officinalis]
Length = 661
Score = 83.2 bits (204), Expect = 4e-15
Identities = 46/75 (61%), Positives = 51/75 (68%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
CDMYA L+ILEG KKLL+AD+FE IV GL GGMV EAK MYD M SLGF
Sbjct: 586 CDMYAXXXX-------LRILEGRKKLLKADEFERIVLGLSAGGMVNEAKRMYDYMPSLGF 638
Query: 181 SPSESVRVAIMASQS 225
SPSE VR A+M + S
Sbjct: 639 SPSEPVRAALMTALS 653
>ref|XP_010257719.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial
[Nelumbo nucifera]
Length = 720
Score = 83.2 bits (204), Expect = 4e-15
Identities = 37/80 (46%), Positives = 62/80 (77%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
CDMY+R+G ++KA ++L ++E K+LLR D FE I++GL+ GG V +AK ++ M++ GF
Sbjct: 637 CDMYSRLGIEKKALEALGVVESKKELLRKDDFERIINGLIAGGFVQDAKKIHGLMEAQGF 696
Query: 181 SPSESVRVAIMASQSFAQHK 240
+ SE ++VA+MASQ+F++ +
Sbjct: 697 ATSEPLKVALMASQTFSRQR 716
>ref|XP_015884644.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150 [Ziziphus jujuba]
ref|XP_015884645.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150 [Ziziphus jujuba]
Length = 727
Score = 82.8 bits (203), Expect = 5e-15
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
CDMYAR G ++KA +SL +LE K+ LR+D+FE I+ GL+ GG V A +++ MQ+ GF
Sbjct: 644 CDMYARAGIEKKALQSLGVLEAKKEQLRSDEFERIIHGLIDGGFVQHANRIHEMMQAQGF 703
Query: 181 SPSESVRVAIMASQSFAQ 234
+ SE ++VA+MASQ+F +
Sbjct: 704 TASEPLKVALMASQAFGR 721
>ref|XP_004953069.1| pentatricopeptide repeat-containing protein At1g01970 [Setaria
italica]
gb|KQL30446.1| hypothetical protein SETIT_016553mg [Setaria italica]
gb|KQL30447.1| hypothetical protein SETIT_016553mg [Setaria italica]
Length = 676
Score = 82.4 bits (202), Expect = 7e-15
Identities = 41/72 (56%), Positives = 51/72 (70%)
Frame = +1
Query: 4 DMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGFS 183
DMYA+ +EKAR+SLK+LE KKLL+ADQFE I+ GLL GG EA Y M+S GF
Sbjct: 592 DMYAKSRQEEKARRSLKMLEEKKKLLKADQFERIIRGLLDGGFSEEANKYYKMMKSFGFE 651
Query: 184 PSESVRVAIMAS 219
PSE++ V + AS
Sbjct: 652 PSETIEVGVKAS 663
>gb|PAN06997.1| hypothetical protein PAHAL_A02503 [Panicum hallii]
Length = 677
Score = 82.4 bits (202), Expect = 7e-15
Identities = 42/72 (58%), Positives = 51/72 (70%)
Frame = +1
Query: 4 DMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGFS 183
DMYA+ +EKAR+SLKILE KKLL+ADQFE I+ GLL GG EA Y M+S G
Sbjct: 593 DMYAKSRQEEKARRSLKILEEKKKLLKADQFERIIRGLLDGGFSEEANKYYKMMKSCGLQ 652
Query: 184 PSESVRVAIMAS 219
PSE++ VA+ AS
Sbjct: 653 PSETIEVAVKAS 664
>gb|OEL27153.1| Pentatricopeptide repeat-containing protein [Dichanthelium
oligosanthes]
Length = 678
Score = 81.6 bits (200), Expect = 1e-14
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = +1
Query: 4 DMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGFS 183
DMYA++ +EKAR+SLKILE K+LL+ADQFE I+ GLL GG EA Y M+S GF
Sbjct: 594 DMYAKLRQEEKARRSLKILEEKKRLLKADQFERIIRGLLDGGFSEEANKYYKMMKSCGFE 653
Query: 184 PSESVRVAIMA 216
PSE++ V + A
Sbjct: 654 PSETIEVGVKA 664
>ref|XP_010060957.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32630
[Eucalyptus grandis]
gb|KCW67856.1| hypothetical protein EUGRSUZ_F01577 [Eucalyptus grandis]
Length = 717
Score = 81.6 bits (200), Expect = 1e-14
Identities = 38/80 (47%), Positives = 59/80 (73%)
Frame = +1
Query: 1 CDMYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGF 180
CDMY+R G ++KA ++L +E K+ L D FE +V+GL+ GG + EA+ M+ MQ+ GF
Sbjct: 634 CDMYSRAGMEKKALQTLGAIEAKKEQLGLDDFEKVVNGLVAGGFIQEAERMHVLMQAQGF 693
Query: 181 SPSESVRVAIMASQSFAQHK 240
+PSES++VA+MASQ+F + +
Sbjct: 694 APSESLKVALMASQAFGRKR 713
>ref|XP_002452434.1| pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Sorghum bicolor]
gb|EES05410.1| hypothetical protein SORBI_3004G212100 [Sorghum bicolor]
Length = 682
Score = 79.3 bits (194), Expect = 8e-14
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = +1
Query: 7 MYARVGNKEKARKSLKILEGGKKLLRADQFETIVSGLLGGGMVGEAKSMYDSMQSLGFSP 186
MYA+ +EKAR+SLKILE KKLL++DQFE ++ GLL GG EA Y M+S GF P
Sbjct: 599 MYAKSRQEEKARRSLKILEEKKKLLKSDQFERVIRGLLDGGFSEEANKYYKMMKSCGFEP 658
Query: 187 SESVRVAIMAS 219
SE++ V + AS
Sbjct: 659 SETIEVGVKAS 669