BLASTX nr result
ID: Ophiopogon23_contig00013119
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00013119
(602 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008803474.1| PREDICTED: mediator of RNA polymerase II tra... 309 e-101
ref|XP_020271355.1| mediator of RNA polymerase II transcription ... 322 2e-98
dbj|BAS80770.1| Os02g0732700, partial [Oryza sativa Japonica Group] 306 3e-96
gb|ACN36552.1| unknown [Zea mays] 287 1e-94
ref|XP_010917649.1| PREDICTED: mediator of RNA polymerase II tra... 310 4e-94
gb|OVA05734.1| Mediator complex [Macleaya cordata] 300 7e-94
gb|PKU68672.1| Mediator of RNA polymerase II transcription subun... 301 8e-94
gb|EEC73949.1| hypothetical protein OsI_08822 [Oryza sativa Indi... 306 8e-93
ref|XP_015625115.1| PREDICTED: mediator of RNA polymerase II tra... 306 9e-93
ref|XP_020595567.1| mediator of RNA polymerase II transcription ... 306 9e-93
ref|XP_015625114.1| PREDICTED: mediator of RNA polymerase II tra... 306 9e-93
gb|PAN08139.1| hypothetical protein PAHAL_A03348 [Panicum hallii] 302 2e-91
ref|XP_020680550.1| mediator of RNA polymerase II transcription ... 301 3e-91
ref|XP_012703585.1| mediator of RNA polymerase II transcription ... 300 7e-91
ref|XP_006650330.1| PREDICTED: mediator of RNA polymerase II tra... 297 9e-90
gb|AQK74586.1| Mediator of RNA polymerase II transcription subun... 292 2e-89
gb|AQK74593.1| Mediator of RNA polymerase II transcription subun... 292 4e-89
ref|XP_022679781.1| mediator of RNA polymerase II transcription ... 294 1e-88
gb|OEL17060.1| Mediator of RNA polymerase II transcription subun... 293 2e-88
ref|XP_009391418.1| PREDICTED: mediator of RNA polymerase II tra... 293 3e-88
>ref|XP_008803474.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Phoenix dactylifera]
Length = 429
Score = 309 bits (791), Expect = e-101
Identities = 151/184 (82%), Positives = 163/184 (88%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLPHEWLESTHTVIKHLRP+TSVAM+
Sbjct: 246 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTVIKHLRPVTSVAML 305
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRIMG MKTLALLFNV+ADVFGKN+QPSTP +ASEI D+IDFLHH
Sbjct: 306 RIAFRIMGPLLPRLAFARPLFMKTLALLFNVIADVFGKNTQPSTPTEASEIKDLIDFLHH 365
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQSTSKPK+E LTLCGKV++LLRPDV HL +HL TDPNSSIYAATHPK+V
Sbjct: 366 AVMYEGQGGPVQSTSKPKLEILTLCGKVLELLRPDVQHLLSHLKTDPNSSIYAATHPKIV 425
Query: 543 QNPA 554
QN A
Sbjct: 426 QNLA 429
>ref|XP_020271355.1| mediator of RNA polymerase II transcription subunit 23 [Asparagus
officinalis]
gb|ONK66197.1| uncharacterized protein A4U43_C06F5210 [Asparagus officinalis]
Length = 1586
Score = 322 bits (825), Expect = 2e-98
Identities = 160/183 (87%), Positives = 165/183 (90%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM
Sbjct: 1403 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 1462
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRIMG MKTLALLFNVLADVFGKNSQPST +ASEITDIIDFLHH
Sbjct: 1463 RIAFRIMGPLLPRLAFARPLFMKTLALLFNVLADVFGKNSQPSTATEASEITDIIDFLHH 1522
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQSTSKP+IECLTLCG++VDLLRPDVAHLF HLTTDP+SSIYAATHPKLV
Sbjct: 1523 AVMYEGQGGPVQSTSKPRIECLTLCGRMVDLLRPDVAHLFMHLTTDPSSSIYAATHPKLV 1582
Query: 543 QNP 551
NP
Sbjct: 1583 PNP 1585
>dbj|BAS80770.1| Os02g0732700, partial [Oryza sativa Japonica Group]
Length = 803
Score = 306 bits (783), Expect = 3e-96
Identities = 148/184 (80%), Positives = 161/184 (87%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLPHEWLESTHTVIKHLRP+ SVAM+
Sbjct: 620 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTVIKHLRPVNSVAML 679
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRI+G MKTLALLFNVL DVFGKNSQ S P++ASEI DIIDFLHH
Sbjct: 680 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPPVEASEIADIIDFLHH 739
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL TDPNSS+YAATHPKLV
Sbjct: 740 AVMYEGQGGPVQSTSKPKLEILTLCGKVMEILRPDVQHLLSHLKTDPNSSVYAATHPKLV 799
Query: 543 QNPA 554
QNP+
Sbjct: 800 QNPS 803
>gb|ACN36552.1| unknown [Zea mays]
Length = 308
Score = 287 bits (734), Expect = 1e-94
Identities = 143/183 (78%), Positives = 154/183 (84%), Gaps = 2/183 (1%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLP EWLESTHTVIKHLRP+ SVAM+
Sbjct: 99 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAML 158
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPS--TPIDASEITDIIDFL 356
RIAFRI+G MKTLALLFNVL DVFGKN Q S P++ASEI DIIDFL
Sbjct: 159 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNPQVSNPNPVEASEIADIIDFL 218
Query: 357 HHVVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPK 536
HH VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL DP SSIYAATHPK
Sbjct: 219 HHAVMYEGQGGPVQSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKIDPTSSIYAATHPK 278
Query: 537 LVQ 545
LVQ
Sbjct: 279 LVQ 281
>ref|XP_010917649.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Elaeis guineensis]
Length = 1607
Score = 310 bits (793), Expect = 4e-94
Identities = 152/184 (82%), Positives = 162/184 (88%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLPHEWLESTHTVIKHLRP+TSVAM+
Sbjct: 1424 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTVIKHLRPVTSVAML 1483
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRIMG MKTLALLFNV+ADVFGKN QPSTP +ASEI D+IDFLHH
Sbjct: 1484 RIAFRIMGPLLPRLAFARPLFMKTLALLFNVIADVFGKNMQPSTPTEASEIKDLIDFLHH 1543
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQSTSKPK+E LTLCGKV+DLLRPDV HL +HL TDPNSSIYAATHPK+V
Sbjct: 1544 AVMYEGQGGPVQSTSKPKLEILTLCGKVLDLLRPDVQHLLSHLKTDPNSSIYAATHPKIV 1603
Query: 543 QNPA 554
QN A
Sbjct: 1604 QNLA 1607
>gb|OVA05734.1| Mediator complex [Macleaya cordata]
Length = 808
Score = 300 bits (767), Expect = 7e-94
Identities = 145/183 (79%), Positives = 159/183 (86%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWA+QDNTSTAIGNIVALLHAFFSNLP EWLE +H VIKHLRP+TSVAM+
Sbjct: 623 SAVGYALLDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLEGSHAVIKHLRPVTSVAML 682
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRIMG MK+LALLFNV+ADVFG+NSQPSTP +ASEI D+IDFLHH
Sbjct: 683 RIAFRIMGPLLPRLAFARPLFMKSLALLFNVMADVFGRNSQPSTPTEASEIADLIDFLHH 742
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
V+YEGQGGPVQS SKPK+E LTLCGKV++LLRPDV HL +HL TDPNSSIYAATHPKLV
Sbjct: 743 AVLYEGQGGPVQSNSKPKLEILTLCGKVMELLRPDVQHLLSHLRTDPNSSIYAATHPKLV 802
Query: 543 QNP 551
QNP
Sbjct: 803 QNP 805
>gb|PKU68672.1| Mediator of RNA polymerase II transcription subunit 23 [Dendrobium
catenatum]
Length = 905
Score = 301 bits (772), Expect = 8e-94
Identities = 144/183 (78%), Positives = 159/183 (86%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAV YAL+DP+WASQDNTSTAIGNIVALLH+FFSNLPHEWLESTHT+IKHLRP+TS+ MM
Sbjct: 722 SAVSYALVDPSWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTIIKHLRPVTSIGMM 781
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRIM MKTLALLFNV+ADVFGKNSQP+TP+DASEI D+IDF+HH
Sbjct: 782 RIAFRIMSPLLPRLAFARPLFMKTLALLFNVMADVFGKNSQPATPVDASEIRDLIDFMHH 841
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQ++SKPK E LTLCGKV++LLRPDV HLFTHL TDPNSSIYAATHPKL
Sbjct: 842 AVMYEGQGGPVQTSSKPKPEILTLCGKVMELLRPDVQHLFTHLQTDPNSSIYAATHPKLA 901
Query: 543 QNP 551
NP
Sbjct: 902 HNP 904
>gb|EEC73949.1| hypothetical protein OsI_08822 [Oryza sativa Indica Group]
Length = 1565
Score = 306 bits (783), Expect = 8e-93
Identities = 148/184 (80%), Positives = 161/184 (87%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLPHEWLESTHTVIKHLRP+ SVAM+
Sbjct: 1382 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTVIKHLRPVNSVAML 1441
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRI+G MKTLALLFNVL DVFGKNSQ S P++ASEI DIIDFLHH
Sbjct: 1442 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPPVEASEIADIIDFLHH 1501
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL TDPNSS+YAATHPKLV
Sbjct: 1502 AVMYEGQGGPVQSTSKPKLEILTLCGKVMEILRPDVQHLLSHLKTDPNSSVYAATHPKLV 1561
Query: 543 QNPA 554
QNP+
Sbjct: 1562 QNPS 1565
>ref|XP_015625115.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X2 [Oryza sativa Japonica Group]
Length = 1592
Score = 306 bits (783), Expect = 9e-93
Identities = 148/184 (80%), Positives = 161/184 (87%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLPHEWLESTHTVIKHLRP+ SVAM+
Sbjct: 1409 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTVIKHLRPVNSVAML 1468
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRI+G MKTLALLFNVL DVFGKNSQ S P++ASEI DIIDFLHH
Sbjct: 1469 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPPVEASEIADIIDFLHH 1528
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL TDPNSS+YAATHPKLV
Sbjct: 1529 AVMYEGQGGPVQSTSKPKLEILTLCGKVMEILRPDVQHLLSHLKTDPNSSVYAATHPKLV 1588
Query: 543 QNPA 554
QNP+
Sbjct: 1589 QNPS 1592
>ref|XP_020595567.1| mediator of RNA polymerase II transcription subunit 23 [Phalaenopsis
equestris]
Length = 1600
Score = 306 bits (783), Expect = 9e-93
Identities = 148/184 (80%), Positives = 159/184 (86%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAV YAL+DP+WASQDNTSTAIGNIVALLH+FFSNLPHEWLESTHT+IKHLRP+ S+ MM
Sbjct: 1417 SAVSYALVDPSWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTIIKHLRPVASIGMM 1476
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRIM MKTLALLFNV+ADVFGKNSQP+TP+DASEI D+IDFLHH
Sbjct: 1477 RIAFRIMSPLLPRLAFARPLFMKTLALLFNVMADVFGKNSQPATPVDASEIKDLIDFLHH 1536
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQS SKPKIE LTLCGKVV+LLRPDV HLF HL TDPNSSIYAATHPKLV
Sbjct: 1537 AVMYEGQGGPVQSNSKPKIEILTLCGKVVELLRPDVQHLFIHLQTDPNSSIYAATHPKLV 1596
Query: 543 QNPA 554
NPA
Sbjct: 1597 HNPA 1600
>ref|XP_015625114.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X1 [Oryza sativa Japonica Group]
dbj|BAD16142.1| unknown protein [Oryza sativa Japonica Group]
dbj|BAF09943.1| Os02g0732700 [Oryza sativa Japonica Group]
gb|EEE57755.1| hypothetical protein OsJ_08276 [Oryza sativa Japonica Group]
dbj|BAS80769.1| Os02g0732700 [Oryza sativa Japonica Group]
Length = 1620
Score = 306 bits (783), Expect = 9e-93
Identities = 148/184 (80%), Positives = 161/184 (87%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLPHEWLESTHTVIKHLRP+ SVAM+
Sbjct: 1437 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTVIKHLRPVNSVAML 1496
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRI+G MKTLALLFNVL DVFGKNSQ S P++ASEI DIIDFLHH
Sbjct: 1497 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPPVEASEIADIIDFLHH 1556
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL TDPNSS+YAATHPKLV
Sbjct: 1557 AVMYEGQGGPVQSTSKPKLEILTLCGKVMEILRPDVQHLLSHLKTDPNSSVYAATHPKLV 1616
Query: 543 QNPA 554
QNP+
Sbjct: 1617 QNPS 1620
>gb|PAN08139.1| hypothetical protein PAHAL_A03348 [Panicum hallii]
Length = 1613
Score = 302 bits (774), Expect = 2e-91
Identities = 148/182 (81%), Positives = 158/182 (86%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLP EWLESTHTVIKHLRP+ SVAM+
Sbjct: 1430 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAML 1489
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRI+G MKTLALLFNVL DVFGKNSQ S P+DASEITDIIDFLHH
Sbjct: 1490 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQVSNPVDASEITDIIDFLHH 1549
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL TDPN SIYAATHPKLV
Sbjct: 1550 AVMYEGQGGPVQSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKTDPNCSIYAATHPKLV 1609
Query: 543 QN 548
QN
Sbjct: 1610 QN 1611
>ref|XP_020680550.1| mediator of RNA polymerase II transcription subunit 23 [Dendrobium
catenatum]
Length = 1561
Score = 301 bits (772), Expect = 3e-91
Identities = 144/183 (78%), Positives = 159/183 (86%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAV YAL+DP+WASQDNTSTAIGNIVALLH+FFSNLPHEWLESTHT+IKHLRP+TS+ MM
Sbjct: 1378 SAVSYALVDPSWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTIIKHLRPVTSIGMM 1437
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRIM MKTLALLFNV+ADVFGKNSQP+TP+DASEI D+IDF+HH
Sbjct: 1438 RIAFRIMSPLLPRLAFARPLFMKTLALLFNVMADVFGKNSQPATPVDASEIRDLIDFMHH 1497
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQ++SKPK E LTLCGKV++LLRPDV HLFTHL TDPNSSIYAATHPKL
Sbjct: 1498 AVMYEGQGGPVQTSSKPKPEILTLCGKVMELLRPDVQHLFTHLQTDPNSSIYAATHPKLA 1557
Query: 543 QNP 551
NP
Sbjct: 1558 HNP 1560
>ref|XP_012703585.1| mediator of RNA polymerase II transcription subunit 23 isoform X2
[Setaria italica]
gb|KQL31386.1| hypothetical protein SETIT_016082mg [Setaria italica]
Length = 1613
Score = 300 bits (769), Expect = 7e-91
Identities = 147/182 (80%), Positives = 157/182 (86%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLP EWLESTHTVIKHLRP+ SVAM+
Sbjct: 1430 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAML 1489
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRI+G MKTLALLFNVL DVFGKNSQ P+DASEITDIIDFLHH
Sbjct: 1490 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQVPNPVDASEITDIIDFLHH 1549
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL TDPN SIYAATHPKLV
Sbjct: 1550 AVMYEGQGGPVQSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKTDPNCSIYAATHPKLV 1609
Query: 543 QN 548
QN
Sbjct: 1610 QN 1611
>ref|XP_006650330.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Oryza brachyantha]
Length = 1620
Score = 297 bits (761), Expect = 9e-90
Identities = 146/184 (79%), Positives = 161/184 (87%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLPHEWLESTHTVIKHLRP+ SVAM+
Sbjct: 1438 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTVIKHLRPVNSVAML 1497
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRI+G MKTLALLFNVL DVFGKNSQ + ++ASEI+DIIDFLHH
Sbjct: 1498 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQ-APHVEASEISDIIDFLHH 1556
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKLV 542
VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL TDPNSS+YAATHPKLV
Sbjct: 1557 AVMYEGQGGPVQSTSKPKLEILTLCGKVMEILRPDVQHLLSHLKTDPNSSVYAATHPKLV 1616
Query: 543 QNPA 554
QNP+
Sbjct: 1617 QNPS 1620
>gb|AQK74586.1| Mediator of RNA polymerase II transcription subunit 23 [Zea mays]
Length = 1054
Score = 292 bits (748), Expect = 2e-89
Identities = 145/186 (77%), Positives = 157/186 (84%), Gaps = 2/186 (1%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLP EWLESTHTVIKHLRP+ SVAM+
Sbjct: 869 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAML 928
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPS--TPIDASEITDIIDFL 356
RIAFRI+G MKTLALLFNVL DVFGKN Q S P++ASEI DIIDFL
Sbjct: 929 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNPQVSNPNPVEASEIADIIDFL 988
Query: 357 HHVVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPK 536
HH VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL DP SSIYAATHPK
Sbjct: 989 HHAVMYEGQGGPVQSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKIDPTSSIYAATHPK 1048
Query: 537 LVQNPA 554
LVQNP+
Sbjct: 1049 LVQNPS 1054
>gb|AQK74593.1| Mediator of RNA polymerase II transcription subunit 23 [Zea mays]
gb|AQK74605.1| Mediator of RNA polymerase II transcription subunit 23 [Zea mays]
Length = 1099
Score = 292 bits (748), Expect = 4e-89
Identities = 145/186 (77%), Positives = 157/186 (84%), Gaps = 2/186 (1%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLP EWLESTHTVIKHLRP+ SVAM+
Sbjct: 914 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAML 973
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPS--TPIDASEITDIIDFL 356
RIAFRI+G MKTLALLFNVL DVFGKN Q S P++ASEI DIIDFL
Sbjct: 974 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNPQVSNPNPVEASEIADIIDFL 1033
Query: 357 HHVVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPK 536
HH VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL DP SSIYAATHPK
Sbjct: 1034 HHAVMYEGQGGPVQSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKIDPTSSIYAATHPK 1093
Query: 537 LVQNPA 554
LVQNP+
Sbjct: 1094 LVQNPS 1099
>ref|XP_022679781.1| mediator of RNA polymerase II transcription subunit 23 isoform X1
[Setaria italica]
gb|KQL31385.1| hypothetical protein SETIT_016082mg [Setaria italica]
Length = 1614
Score = 294 bits (753), Expect = 1e-88
Identities = 146/183 (79%), Positives = 156/183 (85%), Gaps = 1/183 (0%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLP EWLESTHTVIKHLRP+ SVAM+
Sbjct: 1430 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAML 1489
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFL-H 359
RIAFRI+G MKTLALLFNVL DVFGKNSQ P+DASEITDIIDF H
Sbjct: 1490 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQVPNPVDASEITDIIDFFRH 1549
Query: 360 HVVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKL 539
H VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL TDPN SIYAATHPKL
Sbjct: 1550 HAVMYEGQGGPVQSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKTDPNCSIYAATHPKL 1609
Query: 540 VQN 548
VQN
Sbjct: 1610 VQN 1612
>gb|OEL17060.1| Mediator of RNA polymerase II transcription subunit 23, partial
[Dichanthelium oligosanthes]
Length = 1603
Score = 293 bits (751), Expect = 2e-88
Identities = 147/197 (74%), Positives = 160/197 (81%), Gaps = 13/197 (6%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLDPTWASQDNTSTAIGNIVALLH+FFSNLP EWLESTHTVIKHLRP++SVAM+
Sbjct: 1407 SAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVSSVAML 1466
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFL-- 356
RIAFRI+G MKTLALLFNVL DVFGKNSQ S P++ASEITDIIDF
Sbjct: 1467 RIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQVSNPVEASEITDIIDFFMP 1526
Query: 357 -----------HHVVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDP 503
HH VMYEGQGGPVQSTSKPK+E LTLCGKV+++LRPDV HL +HL TDP
Sbjct: 1527 THMNFLLFLNRHHAVMYEGQGGPVQSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKTDP 1586
Query: 504 NSSIYAATHPKLVQNPA 554
N SIYAATHPKLVQNP+
Sbjct: 1587 NCSIYAATHPKLVQNPS 1603
>ref|XP_009391418.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Musa acuminata subsp. malaccensis]
Length = 1575
Score = 293 bits (750), Expect = 3e-88
Identities = 144/184 (78%), Positives = 159/184 (86%), Gaps = 1/184 (0%)
Frame = +3
Query: 3 SAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPHEWLESTHTVIKHLRPITSVAMM 182
SAVGYALLD TWASQDNTSTAIGNIVALLH+FFSNLPHEWLESTHT+IKHLRP+ SVAM+
Sbjct: 1387 SAVGYALLDSTWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTIIKHLRPLNSVAML 1446
Query: 183 RIAFRIMGXXXXXXXXXXXXXMKTLALLFNVLADVFGKNSQPSTPIDASEITDIIDFLHH 362
RIAFRIMG MKTLALLFNV+ADVFGKNSQP+ +AS+I D+IDFLHH
Sbjct: 1447 RIAFRIMGPLLPRLAFARPLFMKTLALLFNVMADVFGKNSQPAVHAEASDIRDLIDFLHH 1506
Query: 363 VVMYEGQGGPVQSTSKPKIECLTLCGKVVDLLRPDVAHLFTHLTTDPNSSIYAATHPKL- 539
VMYEGQGGPVQ+TSKP++E LTLCGKV++LLRPDV HL +HL TDPNSSIYAATHPKL
Sbjct: 1507 AVMYEGQGGPVQNTSKPRVESLTLCGKVMELLRPDVQHLLSHLKTDPNSSIYAATHPKLV 1566
Query: 540 VQNP 551
VQNP
Sbjct: 1567 VQNP 1570