BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00011611
         (688 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus...   141   8e-41
gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagu...   110   8e-31
gb|ONK81628.1| uncharacterized protein A4U43_C01F31260 [Asparagu...   122   4e-30
gb|ONK57948.1| uncharacterized protein A4U43_C09F5950 [Asparagus...   110   5e-30
gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo...   110   4e-28
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   120   1e-27
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   119   4e-27
gb|PON41343.1| Zinc finger, CCHC-type [Parasponia andersonii]         111   1e-26
gb|PON45664.1| Zinc finger, CCHC-type, partial [Parasponia ander...   111   1e-26
gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposo...   115   4e-26
gb|KYP47563.1| Retrovirus-related Pol polyprotein from transposo...   111   4e-26
emb|CDP17738.1| unnamed protein product [Coffea canephora]            116   4e-26
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...   115   6e-26
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   108   3e-25
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo...   110   2e-24
gb|KYP39598.1| Retrovirus-related Pol polyprotein from transposo...   108   2e-24
gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposo...   110   3e-24
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   110   4e-24
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo...   109   6e-24
gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposo...   107   1e-23

>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
          Length = 631

 Score =  141 bits (356), Expect(2) = 8e-41
 Identities = 70/146 (47%), Positives = 101/146 (69%), Gaps = 1/146 (0%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKG-KRKASKNSEVNVARSEGNDSYSFDFPLSILSSVD 428
           ++QC  CK++ HW +DCP+ +  +  K+K  K +EVNVA+  G+DS    F L I   V+
Sbjct: 208 KNQCAFCKEQEHWKRDCPKLKEKENCKKKGPKANEVNVAK--GDDSDDSCFSLLITPEVN 265

Query: 429 WSESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSID 608
             +  +WMLD+GATYH+ PRR+WF+S ++VDGGVV+MGN     +  +GT+RIRMHD   
Sbjct: 266 HVDVLDWMLDSGATYHVTPRRDWFASFEKVDGGVVVMGNDQFCSVCWIGTVRIRMHDG-- 323

Query: 609 RIIRKLSSVRCVPYVRKKIVSVGALE 686
            ++R+L  VR VP ++K I+SVGALE
Sbjct: 324 -VVRELKEVRFVPQLKKNIISVGALE 348



 Score = 54.3 bits (129), Expect(2) = 8e-41
 Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = +2

Query: 2   EDKTLILLNSLPAELEYDTFVTTVISEKSTLKYDEVTAAIINYELR---KNMXXXXXXGE 172
           E K + LL SLP E EYDTFV  +++ +S++ Y EVT A+ NY+LR   K        GE
Sbjct: 121 EYKAIFLLGSLPDE-EYDTFVLILLNGRSSIIYSEVTNALTNYDLRRKDKETSRASTSGE 179

Query: 173 TLSARG 190
           TLS RG
Sbjct: 180 TLSTRG 185


>gb|ONK80561.1| uncharacterized protein A4U43_C01F19200 [Asparagus officinalis]
          Length = 499

 Score =  110 bits (276), Expect(2) = 8e-31
 Identities = 57/129 (44%), Positives = 88/129 (68%), Gaps = 5/129 (3%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKR--KASKNSEVNVARSEGN--DSYSFDFPLSILS 419
           R+QC  CK++GHW  +CP+ ++  GK+  KA + SEVNVA+  G+  D  S  +    L 
Sbjct: 118 RNQCAFCKEEGHWKNECPKLKDRVGKQRGKAVQASEVNVAKVIGDTSDLDSSGYSCPTLL 177

Query: 420 SVDWSESSEWMLDTGATYHICPRREWFSSLKEVD-GGVVLMGNGMSSRIEGVGTIRIRMH 596
           SV +++S+EWMLD+GA +HI P+R+WF++ KE++ G VVLMGN     I G+ ++RIRM 
Sbjct: 178 SVCYADSTEWMLDSGAIFHIYPKRDWFTNFKELERGDVVLMGNDHVCPISGISSVRIRML 237

Query: 597 DSIDRIIRK 623
           D + R +++
Sbjct: 238 DEVTRELKE 246



 Score = 51.6 bits (122), Expect(2) = 8e-31
 Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = +2

Query: 2   EDKTLILLNSLPAELEYDTFVTTVISEKSTLKYDEVTAAIINYELRKN--MXXXXXXGET 175
           EDK ++LL SL +E ++  F  T+I+ ++T+ Y EVT+A++NYELRKN         G+ 
Sbjct: 31  EDKAMLLLCSL-SEDDFGMFFLTLINGRTTVSYKEVTSALVNYELRKNDGELFERASGDA 89

Query: 176 LSARGGSIDQSK 211
           L+ RG S ++ +
Sbjct: 90  LAVRGRSPNRQR 101


>gb|ONK81628.1| uncharacterized protein A4U43_C01F31260 [Asparagus officinalis]
          Length = 267

 Score =  122 bits (305), Expect = 4e-30
 Identities = 62/132 (46%), Positives = 89/132 (67%), Gaps = 1/132 (0%)
 Frame = +3

Query: 294 KDCPEW-ENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDWSESSEWMLDTGAT 470
           +DCP+  E    K+  SK +EVNVAR + +D   F   L I   V+  ++S WMLD+GA+
Sbjct: 65  RDCPKLKEKENSKKNGSKANEVNVARDDDSDDLCFS--LLITPEVNHVDASNWMLDSGAS 122

Query: 471 YHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDRIIRKLSSVRCVPY 650
           YH+ PRR+WF+S + +DGGVV+MGN  S  I  +GTIRI+MHD    ++R+L+ VR VP 
Sbjct: 123 YHVTPRRDWFASFERLDGGVVVMGNDQSCGIYRIGTIRIQMHDG---VVRELNEVRFVPQ 179

Query: 651 VRKKIVSVGALE 686
           ++  ++SV ALE
Sbjct: 180 LKMNLISVRALE 191


>gb|ONK57948.1| uncharacterized protein A4U43_C09F5950 [Asparagus officinalis]
          Length = 286

 Score =  110 bits (274), Expect(2) = 5e-30
 Identities = 62/142 (43%), Positives = 92/142 (64%), Gaps = 5/142 (3%)
 Frame = +3

Query: 276 QKGHWAKDCPEWENSKGKR--KASKNSEVNVAR--SEGNDSYSFDFPLSILSSVDWSESS 443
           ++GHW  +CP  ++   K+  KA +  EVNVA+  S+ +DS   D+    L SV +++S+
Sbjct: 93  REGHWKNECPNLKDRAWKQRGKAVQALEVNVAKAVSDHSDSDYSDYSCPALPSVCYADST 152

Query: 444 EWMLDTGATYHICPRREWFSSLKEVD-GGVVLMGNGMSSRIEGVGTIRIRMHDSIDRIIR 620
           EWM+D+GAT+ ICP+ +WFSS +E++ G VVLM N     I G+ T+RI MHD    + R
Sbjct: 153 EWMMDSGATFRICPKSDWFSSFEELERGDVVLMENDHVCSIGGISTVRIMMHDG---VTR 209

Query: 621 KLSSVRCVPYVRKKIVSVGALE 686
           +L  VR VP + K I+S+G LE
Sbjct: 210 ELKEVRFVPQL-KNIISLGTLE 230



 Score = 49.7 bits (117), Expect(2) = 5e-30
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
 Frame = +2

Query: 2   EDKTLILLNSLPAELEYDTFVTTVISEKSTLKYDEVTAAIINYELRK--NMXXXXXXGET 175
           ED  ++L  SLP + ++ TFV  +I+E++T+ Y EVT+ +INYELRK          G+ 
Sbjct: 31  EDNAMLLFCSLPED-DFGTFVFNMINERTTVSYKEVTSVLINYELRKGDGEPSEKASGDA 89

Query: 176 LSARGG 193
           L+ R G
Sbjct: 90  LAVREG 95


>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 365

 Score =  110 bits (276), Expect(2) = 4e-28
 Identities = 58/144 (40%), Positives = 90/144 (62%)
 Frame = +3

Query: 255 DQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDWS 434
           ++C+ CK++GHW +DCP+   SK +++     E +VA     DS +    L   S +D S
Sbjct: 113 NRCYYCKKEGHWKRDCPK--KSKQQQQKKSGEEASVASRLEKDSET----LCTFSCMDSS 166

Query: 435 ESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDRI 614
           +S  W+LD+  +YH+CP R+WFS+    DGG V+MGN    +  G+GTI+I+M D    +
Sbjct: 167 DS--WILDSDCSYHMCPFRDWFSTYSIHDGGRVIMGNNSECKSVGIGTIKIKMFDG---V 221

Query: 615 IRKLSSVRCVPYVRKKIVSVGALE 686
           IR L+ VR VP +RK ++S+G L+
Sbjct: 222 IRTLTEVRHVPDLRKGLISLGTLD 245



 Score = 42.4 bits (98), Expect(2) = 4e-28
 Identities = 24/62 (38%), Positives = 38/62 (61%)
 Frame = +2

Query: 2   EDKTLILLNSLPAELEYDTFVTTVISEKSTLKYDEVTAAIINYELRKNMXXXXXXGETLS 181
           E++ L+LL+SLP    YD  VTT++  K TLK +EV A +++ E+R         GE+L+
Sbjct: 31  ENEALLLLSSLPKS--YDHLVTTILYGKDTLKVEEVNATLLSNEVRNKQ----STGESLT 84

Query: 182 AR 187
            +
Sbjct: 85  VK 86


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  120 bits (302), Expect = 1e-27
 Identities = 61/145 (42%), Positives = 88/145 (60%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           +D+C  C +KGHW KDCP+ +    K K  +++ V   +S+     S    LS  S  D 
Sbjct: 167 KDECAFCHEKGHWKKDCPKLQK---KEKVPQDANVAECKSDVESDISLIVSLSASSYPD- 222

Query: 432 SESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDR 611
               EW+LD+G TYH+CP R+WF   +E+DGGVV MGN    +  G+G+I++R HD   R
Sbjct: 223 ----EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTR 278

Query: 612 IIRKLSSVRCVPYVRKKIVSVGALE 686
           I+R    VR VP ++K ++S+GALE
Sbjct: 279 ILR---DVRYVPKLKKNLISLGALE 300


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  119 bits (298), Expect = 4e-27
 Identities = 60/145 (41%), Positives = 88/145 (60%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           +D+C  C +KGHW KDCP+ +    K K  +++ V   +S+     S    LS    +D 
Sbjct: 168 KDECAFCHEKGHWKKDCPKLQK---KEKVLQDANVAECKSDVESDISLIVSLSASLYLD- 223

Query: 432 SESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDR 611
               EW+LD+G TYH+CP R+WF   +E+DGGVV MGN    +  G+G+I++R HD   R
Sbjct: 224 ----EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTR 279

Query: 612 IIRKLSSVRCVPYVRKKIVSVGALE 686
           I+R    VR VP ++K ++S+GALE
Sbjct: 280 ILR---DVRYVPKLKKNLISLGALE 301


>gb|PON41343.1| Zinc finger, CCHC-type [Parasponia andersonii]
          Length = 297

 Score =  111 bits (277), Expect(2) = 1e-26
 Identities = 54/145 (37%), Positives = 89/145 (61%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           R +C+ C ++GH+ +DCP+    K   K     E +VA S+G DS        +L   D 
Sbjct: 133 RLKCFHCHKEGHFKRDCPD-RKKKVHEKPKDPGEASVA-SDGYDS------AEVLVVTDE 184

Query: 432 SESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDR 611
             S EW++D+G ++H+CP + WF +L++ DGG VL+GN    ++ G+G++RIRM D ++R
Sbjct: 185 DSSKEWIMDSGCSFHMCPTKSWFENLEKTDGGSVLLGNNKPCKVAGIGSVRIRMFDGMER 244

Query: 612 IIRKLSSVRCVPYVRKKIVSVGALE 686
           I   L  VR VP +++ ++S+G L+
Sbjct: 245 I---LQQVRYVPELKRNLISLGMLD 266



 Score = 37.4 bits (85), Expect(2) = 1e-26
 Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = +2

Query: 2   EDKTLILLNSLPAELEYDTFVTTVI-SEKSTLKYDEVTAAIINYEL-RKNMXXXXXXGET 175
           EDK LILLN+LP    Y+ F   ++   + T+  DEV +A+   EL RK        GE 
Sbjct: 50  EDKALILLNALPK--AYEHFKDAMLYGREQTITLDEVQSAVKAKELPRKKEGKEENTGEG 107

Query: 176 LSARGGS 196
           L ARG S
Sbjct: 108 LMARGRS 114


>gb|PON45664.1| Zinc finger, CCHC-type, partial [Parasponia andersonii]
          Length = 215

 Score =  111 bits (278), Expect = 1e-26
 Identities = 57/145 (39%), Positives = 91/145 (62%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           +D+C  C +K HW KDCP+ +N KGK KA+ ++ V   + + +D        +++S    
Sbjct: 80  KDECAFCYEKRHWKKDCPKLQN-KGKDKATSDAYVAEVKDDESD-------FALVSQSMT 131

Query: 432 SESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDR 611
           S++ EW+L +G TYH+ P +EWF + +EVDG VV MGN  S +  GVG+IR++ HD   R
Sbjct: 132 SQNDEWILASGCTYHMYPHKEWFFNFEEVDGRVVYMGNDESCKTTGVGSIRLKNHDGSTR 191

Query: 612 IIRKLSSVRCVPYVRKKIVSVGALE 686
           +   L+ +R V  ++K  +S+GAL+
Sbjct: 192 V---LTDIRYVLKLKKIFISLGALK 213


>gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 507

 Score =  115 bits (288), Expect = 4e-26
 Identities = 61/144 (42%), Positives = 88/144 (61%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           RD C  CK+ GHW KDCP+  N K          V VA  E + S+  +  LSI+ +   
Sbjct: 133 RDICNYCKEPGHWKKDCPKKRNQKS---------VAVAAQE-DSSFENELVLSIVDNHQH 182

Query: 432 SESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDR 611
           S + +W+LD+G +YH+CP R WF + ++  GG V MGN M+ +  G+GTI+I+MHD    
Sbjct: 183 S-AEQWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDG--- 238

Query: 612 IIRKLSSVRCVPYVRKKIVSVGAL 683
           +IR L+ VR VP ++K ++SVG L
Sbjct: 239 VIRTLTEVRHVPDLKKNLISVGVL 262


>gb|KYP47563.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 269

 Score =  111 bits (278), Expect = 4e-26
 Identities = 57/145 (39%), Positives = 86/145 (59%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           RD C  CK+ GHW KDCP+  N K    A++           + S+  +  LSI+ +   
Sbjct: 131 RDICNYCKEPGHWKKDCPKKRNQKSVAAATQE----------DSSFENELVLSIVDNHQH 180

Query: 432 SESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDR 611
           S + +W+LD+G +YH+CP R WF + ++   G V MGN M+ +I G+ TI+I MHD    
Sbjct: 181 S-AEQWVLDSGCSYHMCPNRSWFLTYEKKSSGDVFMGNDMACKIIGIETIQIEMHDG--- 236

Query: 612 IIRKLSSVRCVPYVRKKIVSVGALE 686
           +IR L+ VR VP ++K ++SVG L+
Sbjct: 237 VIRTLTEVRHVPDLKKNLISVGVLD 261


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  116 bits (290), Expect = 4e-26
 Identities = 59/145 (40%), Positives = 85/145 (58%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           +D+C  C++KGHW KDCP     K K+K     +VNVA  + +    F   +S L+S   
Sbjct: 253 KDECAFCREKGHWKKDCP-----KLKKKGKAPQDVNVAECKSDAESDFSLAVSRLTS--- 304

Query: 432 SESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDR 611
               EW+LD+  TYH+ P REWF   +E+DGG V MGN    +  G+G+I++R HD   R
Sbjct: 305 -HPDEWILDSTCTYHMTPMREWFFEFEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTR 363

Query: 612 IIRKLSSVRCVPYVRKKIVSVGALE 686
           I   L  VR VP +++ ++S+G LE
Sbjct: 364 I---LKDVRYVPNLKRSLISLGLLE 385


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score =  115 bits (288), Expect = 6e-26
 Identities = 61/144 (42%), Positives = 88/144 (61%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           RD C  CK+ GHW KDCP+  N K          V VA  E + S+  +  LSI+ +   
Sbjct: 160 RDICNYCKEPGHWKKDCPKKRNQKS---------VAVAAQE-DSSFENELVLSIVDNHQH 209

Query: 432 SESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDR 611
           S + +W+LD+G +YH+CP R WF + ++  GG V MGN M+ +  G+GTI+I+MHD    
Sbjct: 210 S-AEQWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDG--- 265

Query: 612 IIRKLSSVRCVPYVRKKIVSVGAL 683
           +IR L+ VR VP ++K ++SVG L
Sbjct: 266 VIRTLTEVRHVPDLKKNLISVGVL 289


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  108 bits (271), Expect(2) = 3e-25
 Identities = 55/144 (38%), Positives = 86/144 (59%)
 Frame = +3

Query: 255 DQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDWS 434
           D C  CK+KGHW  DCP+      K+K S+   V+ A +E + +   D  +++++     
Sbjct: 223 DVCNYCKEKGHWKFDCPK------KKKQSEKQSVSAAVAEEDTNSEED--IALVADEHTH 274

Query: 435 ESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDRI 614
            S  W+LD+GA+YHICPRREWF++ ++VDGG + M N    ++ G G+I+IR HD     
Sbjct: 275 HSDVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDG---S 331

Query: 615 IRKLSSVRCVPYVRKKIVSVGALE 686
              L+ VR VP + K ++S+  L+
Sbjct: 332 FCTLNEVRHVPLMTKNLISLSLLD 355



 Score = 34.7 bits (78), Expect(2) = 3e-25
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = +2

Query: 2   EDKTLILLNSLPAELEYDTFVTTVISEKSTLKYDEVTAAIINYELR 139
           ED  LILL SLP  + ++ FV + I  K T+  +EV +A+ + ELR
Sbjct: 139 EDAALILLVSLP--MSFENFVQSFIVGKDTVSLEEVRSALHSRELR 182


>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 448

 Score =  110 bits (274), Expect = 2e-24
 Identities = 59/142 (41%), Positives = 84/142 (59%)
 Frame = +3

Query: 261 CWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDWSES 440
           C  CK+ GHW  DCP       K+K  K + V V   E   S   +  LSI+ +   S +
Sbjct: 1   CNYCKEPGHWKNDCP-------KKKNQKPTAVTV--QESTSSSDNELVLSIVDNHQQS-A 50

Query: 441 SEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDRIIR 620
            +W+LD+G +YH+CP R WF + +E  GG V MGN M  +  G+GTI++RMHD    +IR
Sbjct: 51  DQWVLDSGCSYHMCPNRSWFLTYEERLGGRVFMGNDMPCKTVGIGTIQLRMHDG---VIR 107

Query: 621 KLSSVRCVPYVRKKIVSVGALE 686
            L+ VR VP ++K ++SVG L+
Sbjct: 108 TLTEVRHVPDLKKNLISVGVLD 129


>gb|KYP39598.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 350

 Score =  108 bits (270), Expect = 2e-24
 Identities = 59/144 (40%), Positives = 84/144 (58%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           +D+C  C++KGHW KDCP+ +N KG+ K   +S  NVA       Y  D   S+  S   
Sbjct: 217 KDECAFCREKGHWKKDCPKLKN-KGQSKTVADS--NVAE------YVDDSDCSLAVSGST 267

Query: 432 SESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDR 611
           S SS W+LD+G + H+CP REWF   +E++ GVV   N +     G+G+IR++  D    
Sbjct: 268 SSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTHGIGSIRLKNRDG--- 324

Query: 612 IIRKLSSVRCVPYVRKKIVSVGAL 683
            IR L  VR VP + + ++SVGAL
Sbjct: 325 AIRTLKDVRFVPSLSRNLISVGAL 348


>gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 561

 Score =  110 bits (275), Expect = 3e-24
 Identities = 60/145 (41%), Positives = 85/145 (58%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           +D+C  C++KGHW KDCP+ +N KG+ K   +S  NVA       Y  D   S+  S   
Sbjct: 205 KDECAFCREKGHWKKDCPKLKN-KGQSKTVADS--NVAE------YVDDSDCSLAVSGST 255

Query: 432 SESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDR 611
           S SS W+LD+G + H+CP REWF   +E++ GVV   N +     G+G+IR++  D    
Sbjct: 256 SSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTHGIGSIRLKNRDG--- 312

Query: 612 IIRKLSSVRCVPYVRKKIVSVGALE 686
            IR L  VR VP + + ++SVGALE
Sbjct: 313 AIRTLKDVRFVPSLSRNLISVGALE 337


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1032

 Score =  110 bits (275), Expect = 4e-24
 Identities = 60/145 (41%), Positives = 85/145 (58%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           +D+C  C++KGHW KDCP+ +N KG+ K   +S  NVA       Y  D   S+  S   
Sbjct: 17  KDECAFCREKGHWKKDCPKLKN-KGQSKTVADS--NVAE------YVDDSDCSLAVSGST 67

Query: 432 SESSEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSIDR 611
           S SS W+LD+G + H+CP REWF   +E++ GVV   N +     G+G+IR++  D    
Sbjct: 68  SSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTHGIGSIRLKNRDG--- 124

Query: 612 IIRKLSSVRCVPYVRKKIVSVGALE 686
            IR L  VR VP + + ++SVGALE
Sbjct: 125 AIRTLKDVRFVPSLSRNLISVGALE 149


>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score =  109 bits (273), Expect = 6e-24
 Identities = 62/147 (42%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           RD C  CK+ GHW KDCP+  N K          V VA  E +   SF+  L +LS VD 
Sbjct: 212 RDICNYCKEPGHWKKDCPKKRNQKS---------VVVAAQEDS---SFENEL-VLSIVDN 258

Query: 432 SES--SEWMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSI 605
            +    +W+LD+G +YH+CP R WF + ++  GG V MGN M+ +   +GTI+I+MHD  
Sbjct: 259 HQHFVEQWVLDSGCSYHMCPNRSWFLTYEKKFGGDVFMGNDMACKTISIGTIQIKMHDG- 317

Query: 606 DRIIRKLSSVRCVPYVRKKIVSVGALE 686
             +IR L+ VR VP ++K ++SVG L+
Sbjct: 318 --VIRTLTEVRHVPDLKKNLISVGVLD 342


>gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score =  107 bits (266), Expect = 1e-23
 Identities = 57/144 (39%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
 Frame = +3

Query: 252 RDQCWKCKQKGHWAKDCPEWENSKGKRKASKNSEVNVARSEGNDSYSFDFPLSILSSVDW 431
           +D C  CK+ GHW KDCP+    KGK  A+   E + + +E            +LS  D 
Sbjct: 236 KDICNYCKEPGHWKKDCPK---KKGKPSAAVAKEESTSENE-----------LVLSIADQ 281

Query: 432 SESSE--WMLDTGATYHICPRREWFSSLKEVDGGVVLMGNGMSSRIEGVGTIRIRMHDSI 605
            + SE  W+LD+G ++H+CP R WF + ++  GG V MGN    +  G+GTI+I+MHD  
Sbjct: 282 PQHSEDQWILDSGCSFHMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHDG- 340

Query: 606 DRIIRKLSSVRCVPYVRKKIVSVG 677
             I R L+ VR VP ++K ++SVG
Sbjct: 341 --ITRTLTEVRHVPELKKNLISVG 362