BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00009559
         (486 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus...    70   4e-11
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...    70   6e-11
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar...    67   5e-10
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...    67   7e-10
emb|CDP17738.1| unnamed protein product [Coffea canephora]             66   1e-09
ref|XP_012070606.1| uncharacterized protein LOC105632772 [Jatrop...    63   2e-08
gb|KYP59920.1| Retrovirus-related Pol polyprotein from transposo...    62   2e-08
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo...    62   5e-08
emb|CDP17739.1| unnamed protein product [Coffea canephora]             61   6e-08
gb|KYP69055.1| Retrovirus-related Pol polyprotein from transposo...    60   1e-07
gb|PHT32711.1| High mobility group B protein 9 [Capsicum baccatum]     60   1e-07
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro...    60   1e-07
gb|AAC12735.1| putative retrovirus-related polyprotein, partial ...    59   2e-07
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          60   3e-07
gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposo...    59   3e-07
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...    59   3e-07
gb|KYP69064.1| Retrovirus-related Pol polyprotein from transposo...    57   5e-07
gb|PNX57796.1| putative retrotransposon Ty1-copia subclass prote...    58   6e-07
gb|KYP69993.1| Retrovirus-related Pol polyprotein from transposo...    57   6e-07
gb|KYP54549.1| Retrovirus-related Pol polyprotein from transposo...    57   6e-07

>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
          Length = 631

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
 Frame = -3

Query: 232 NYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL---HGGLPGEDPV 62
           ++FV+FVD+YSR  WV TM  +++   IF++WKK +ELQTGR+++ L   +GG    DP 
Sbjct: 450 HWFVTFVDDYSRHCWVYTMTKKSEVLDIFVEWKKRLELQTGRKIKTLRSDNGGEYTSDPF 509

Query: 61  RDICLKQGIRR 29
           + +C  +GI R
Sbjct: 510 QQLCRDEGIER 520


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1032

 Score = 70.1 bits (170), Expect = 6e-11
 Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 8/96 (8%)
 Frame = -3

Query: 283 GILVFASRDLLG-----SRL*HNYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVEL 119
           GIL +   D+ G     S   ++Y+V+FVD++SR +WV  MK +++  GIF+KWKK +E 
Sbjct: 263 GILDYVHSDVWGPSKTASLAGNHYYVTFVDDFSRRIWVYAMKTKDEVLGIFLKWKKRMET 322

Query: 118 QTGRRVREL---HGGLPGEDPVRDICLKQGIRRCYS 20
           QTGR+++     +GG    DP +  C + GI R ++
Sbjct: 323 QTGRKIKHFRTDNGGEYTSDPFKKACEESGIVRHFT 358


>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
          Length = 1034

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
 Frame = -3

Query: 232 NYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL---HGGLPGEDPV 62
           +YFV+FVD+YSR +WV  MK +N+   +F+KWKK+VE Q  R+V+ L   +G     DP 
Sbjct: 349 HYFVTFVDDYSRKVWVYLMKRKNEVLDVFLKWKKMVETQADRKVKRLRSDNGTEYKNDPF 408

Query: 61  RDICLKQGIRRCYS 20
             +C  +GI R ++
Sbjct: 409 LQVCHDEGIVRHFT 422


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
 Frame = -3

Query: 232 NYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL---HGGLPGEDPV 62
           +YFV+FVD++SR +WV TMK++N    IF+KWK  VE  TGR+++ L   +GG    DP 
Sbjct: 436 HYFVTFVDDFSRRVWVFTMKNKNDVLEIFLKWKAEVENHTGRKIKVLQTDNGGEYKSDPF 495

Query: 61  RDICLKQGIRRCYS 20
            ++C   GI R ++
Sbjct: 496 LNVCQDCGIVRHFT 509


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
 Frame = -3

Query: 229 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL---HGGLPGEDPVR 59
           YFV+F+D++SR +WV TMK +++   IF+KWK  VE QTGR+++ L   +GG    DP +
Sbjct: 523 YFVTFIDDFSRRVWVFTMKSKDEMLKIFLKWKARVENQTGRKIKILRTDNGGEYKSDPFQ 582

Query: 58  DICLKQGIRR 29
            IC + GI R
Sbjct: 583 KICQECGIVR 592


>ref|XP_012070606.1| uncharacterized protein LOC105632772 [Jatropha curcas]
          Length = 411

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
 Frame = -3

Query: 283 GILVFASRDLLG-----SRL*HNYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVEL 119
           GIL +   D+ G     S    +Y+V+FVD++SR +WV T+K +++  G+F+KWKK+VE 
Sbjct: 343 GILDYVHSDVWGPSTTASLSGKHYYVTFVDDFSRRVWVYTLKSKDEVLGVFLKWKKLVET 402

Query: 118 QTGRRVR 98
           QTGR ++
Sbjct: 403 QTGRHIK 409


>gb|KYP59920.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 259

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
 Frame = -3

Query: 229 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVRELH--GGLP-GEDPVR 59
           YF+S +D+YSR  W+  MKH+NQ    F +WK +VE QTG+R++ L    GL        
Sbjct: 76  YFLSIIDDYSRMTWIFIMKHKNQAFKYFKEWKILVENQTGKRIKRLRTDNGLEFCSAEFN 135

Query: 58  DICLKQGIRRCYS 20
           D C K+GI R Y+
Sbjct: 136 DYCKKEGIVRQYT 148


>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score = 61.6 bits (148), Expect = 5e-08
 Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -3

Query: 229 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVRELHGGLPGE---DPVR 59
           YF+S +D+YSR  W+  MKH+NQ    F +WK +VE QTG+R++ L      E       
Sbjct: 478 YFLSIIDDYSRMTWIFIMKHKNQAFKYFKEWKILVENQTGKRIKRLRTDNSLEFCSAEFN 537

Query: 58  DICLKQGIRRCYS 20
           D C K+GI R Y+
Sbjct: 538 DYCKKEGIVRQYT 550


>emb|CDP17739.1| unnamed protein product [Coffea canephora]
          Length = 435

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
 Frame = -3

Query: 229 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL---HGGLPGEDPVR 59
           YFV+F+D++SR +WV TMK +++   IF+KWK  VE QTGR+++ L   +GG    DP +
Sbjct: 131 YFVTFIDDFSRRVWVFTMKSKDEVLEIFLKWKARVENQTGRKIKILRTDNGGEYKSDPFQ 190

Query: 58  DICLKQGI 35
            I  + GI
Sbjct: 191 KIGQECGI 198


>gb|KYP69055.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 264

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = -3

Query: 229 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVRELH--GGLP-GEDPVR 59
           YF+S +D+YSR  W+  MKH+NQ    F +WK ++E QT + V+ L    GL  G     
Sbjct: 126 YFLSIMDDYSRMTWIFIMKHKNQAFKCFKEWKILMEKQTSKMVKRLRTDNGLEFGSKEFN 185

Query: 58  DICLKQGIRRCYS 20
           D C  +GI R YS
Sbjct: 186 DFCKAEGIARQYS 198


>gb|PHT32711.1| High mobility group B protein 9 [Capsicum baccatum]
          Length = 483

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/59 (49%), Positives = 42/59 (71%)
 Frame = -3

Query: 268 ASRDLLGSRL*HNYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVREL 92
           A    LG R   +YFV+FVD++SR +WV TMK++++  GIF+KWK  VE QT R+++ L
Sbjct: 428 AKTPTLGGR---HYFVTFVDDFSRRVWVFTMKNKDEVLGIFLKWKAQVENQTERKIKVL 483


>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
 Frame = -3

Query: 283 GILVFASRDLLG-----SRL*HNYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVEL 119
           GIL +   DL G     SR    Y++S +D+YSR +WV T+K +++    F  WK +VE 
Sbjct: 469 GILDYVHSDLWGPSRVASRGGARYYISVIDDYSRKLWVVTLKSKDEAFKAFKDWKMMVET 528

Query: 118 QTGRRVRELH--GGLP-GEDPVRDICLKQGIRRCYS 20
           QTG+++++L    GL       +D C ++GI R Y+
Sbjct: 529 QTGKKIKKLRTDNGLEYCSTEFKDFCKQEGIVRHYT 564


>gb|AAC12735.1| putative retrovirus-related polyprotein, partial [Lithospermum
           erythrorhizon]
          Length = 244

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
 Frame = -3

Query: 331 LHFRLSRHMVRRMCVAGILVFASRDLLGSRL*HN-----YFVSFVDEYSRFMWVATMKHR 167
           L F  S+H  R     G+L +   DL G    ++     YFV+FVD+YSR+ W+  +KH+
Sbjct: 154 LKFFTSKHKSR-----GLLDYVHTDLWGPAKVNSKDGSWYFVTFVDDYSRYAWIYFLKHK 208

Query: 166 NQTRGIFIKWKKVVELQTGRRVR 98
           N+   IF +W+ +VE +TGR+++
Sbjct: 209 NEVFDIFKQWRAMVENRTGRKLK 231


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 27/69 (39%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
 Frame = -3

Query: 232 NYFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVRELHGGLPGE--DPVR 59
           +YFV+F+D+YSR +WV T+KH++   G+F ++  +VE QTG++++ +     GE   P  
Sbjct: 497 SYFVTFIDDYSRKLWVYTLKHKSDVLGVFKEFHALVERQTGKKLKCIRTDNGGEYCGPFD 556

Query: 58  DICLKQGIR 32
           + C + GIR
Sbjct: 557 EYCRRYGIR 565


>gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 507

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -3

Query: 229 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVRELH--GGLP-GEDPVR 59
           YF+S +D+YS   W+  MKH+NQ    F +WK +VE QTG+R++ L    GL        
Sbjct: 324 YFLSIIDDYSGMTWIFIMKHKNQAFKYFKEWKILVENQTGKRIKRLRTDNGLEFCSAEFN 383

Query: 58  DICLKQGIRRCYS 20
           D C K+GI R Y+
Sbjct: 384 DYCKKEGIVRQYT 396


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -3

Query: 229 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVRELH--GGLP-GEDPVR 59
           YF+S +D+YS   W+  MKH+NQ    F +WK +VE QTG+R++ L    GL        
Sbjct: 426 YFLSIIDDYSGMTWIFIMKHKNQAFKYFKEWKILVENQTGKRIKRLRTDNGLEFCSAEFN 485

Query: 58  DICLKQGIRRCYS 20
           D C K+GI R Y+
Sbjct: 486 DYCKKEGIVRQYT 498


>gb|KYP69064.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 205

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = -3

Query: 229 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVRELH--GGLP-GEDPVR 59
           YF+S +D YSR  W+  MKH+NQ    F +WK ++E QT +RV+ L    GL        
Sbjct: 114 YFLSIIDNYSRMTWIFIMKHKNQAFRCFKEWKILMEKQTSKRVKRLRTDNGLEFCTKEFN 173

Query: 58  DICLKQGIRRCYS 20
           D C  +GI R Y+
Sbjct: 174 DFCKAEGIARQYT 186


>gb|PNX57796.1| putative retrotransposon Ty1-copia subclass protein, partial
           [Trifolium pratense]
          Length = 285

 Score = 58.2 bits (139), Expect = 6e-07
 Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
 Frame = -3

Query: 331 LHFRLSRHMVRRMCVAGILVFASRDLLG-----SRL*HNYFVSFVDEYSRFMWVATMKHR 167
           L F  S+H  R     GIL +   D+ G     S+    YFV++VD++SR+ W+  +KH+
Sbjct: 104 LRFSSSKHKSR-----GILDYVHTDVWGPAPVTSKGGSRYFVTYVDDHSRYAWIYFLKHK 158

Query: 166 NQTRGIFIKWKKVVELQTGRRVREL---HGGLPGEDPVRDICLKQGIRRCYSSQG 11
           N+    F  WK +VE +TGR+++ L   +G    +   +  C ++GI R ++ +G
Sbjct: 159 NEVFDNFKCWKAMVENRTGRKLKTLRSDNGTEYTDGAFKRFCDQEGIVRHWTVRG 213


>gb|KYP69993.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 210

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = -3

Query: 229 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVRELH--GGLP-GEDPVR 59
           YF+S +D YSR  W+  MKH+NQ    F +WK ++E QT +RV+ L    GL        
Sbjct: 119 YFLSIIDNYSRMTWIFIMKHKNQAFRCFKEWKILMEKQTSKRVKRLRTDNGLEFCTKEFN 178

Query: 58  DICLKQGIRRCYS 20
           D C  +GI R Y+
Sbjct: 179 DFCKAEGIARQYT 191


>gb|KYP54549.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 210

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = -3

Query: 229 YFVSFVDEYSRFMWVATMKHRNQTRGIFIKWKKVVELQTGRRVRELH--GGLP-GEDPVR 59
           YF+S +D YSR  W+  MKH+NQ    F +WK ++E QT +RV+ L    GL        
Sbjct: 119 YFLSIIDNYSRMTWIFIMKHKNQAFRCFKEWKILMEKQTSKRVKRLRTDNGLEFCTKEFN 178

Query: 58  DICLKQGIRRCYS 20
           D C  +GI R Y+
Sbjct: 179 DFCKAEGIARQYT 191