BLASTX nr result

ID: Ophiopogon23_contig00006983 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00006983
         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273885.1| LOW QUALITY PROTEIN: thylakoidal processing ...    78   6e-14
gb|ONK64890.1| uncharacterized protein A4U43_C07F31140 [Asparagu...    78   8e-14

>ref|XP_020273885.1| LOW QUALITY PROTEIN: thylakoidal processing peptidase 1,
           chloroplastic-like [Asparagus officinalis]
          Length = 408

 Score = 77.8 bits (190), Expect = 6e-14
 Identities = 57/128 (44%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
 Frame = +1

Query: 1   STLPGDR-------KPKAQATHYPA--KYTTMAGSNHSVVPKGSKPVSLTVSLIXXXXXX 153
           S   GDR       K KAQA H PA  KY+T+A       PKGS+P ++TVSLI      
Sbjct: 68  SCFTGDRTRSTAQEKSKAQA-HAPATVKYSTLA-------PKGSRPANITVSLISAVVSG 119

Query: 154 XXXXXXXXXXXXXXXXXXXFGGLKPSSFLPFLQGNKWFPCSEFTAGPSK-SVKDKEVTVS 330
                               GGLKPS FLPFLQ NKWFPCSEF  G S+   +DKE   +
Sbjct: 120 SGAGSNVGLGVFGVSSSIGLGGLKPSYFLPFLQPNKWFPCSEFVPGSSRGGFEDKE---A 176

Query: 331 VSVDTSRA 354
           V VD S A
Sbjct: 177 VGVDKSGA 184


>gb|ONK64890.1| uncharacterized protein A4U43_C07F31140 [Asparagus officinalis]
          Length = 601

 Score = 77.8 bits (190), Expect = 8e-14
 Identities = 57/128 (44%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
 Frame = +1

Query: 1   STLPGDR-------KPKAQATHYPA--KYTTMAGSNHSVVPKGSKPVSLTVSLIXXXXXX 153
           S   GDR       K KAQA H PA  KY+T+A       PKGS+P ++TVSLI      
Sbjct: 164 SCFTGDRTRSTAQEKSKAQA-HAPATVKYSTLA-------PKGSRPANITVSLISAVVSG 215

Query: 154 XXXXXXXXXXXXXXXXXXXFGGLKPSSFLPFLQGNKWFPCSEFTAGPSK-SVKDKEVTVS 330
                               GGLKPS FLPFLQ NKWFPCSEF  G S+   +DKE   +
Sbjct: 216 SGAGSNVGLGVFGVSSSIGLGGLKPSYFLPFLQPNKWFPCSEFVPGSSRGGFEDKE---A 272

Query: 331 VSVDTSRA 354
           V VD S A
Sbjct: 273 VGVDKSGA 280


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