BLASTX nr result
ID: Ophiopogon23_contig00006500
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00006500
(408 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK70128.1| uncharacterized protein A4U43_C05F30550 [Asparagu... 133 1e-33
ref|XP_020265363.1| LOW QUALITY PROTEIN: DNA-directed RNA polyme... 133 2e-33
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub... 93 2e-19
ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I sub... 93 3e-19
ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I sub... 90 3e-18
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial... 89 1e-17
ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I sub... 88 1e-17
gb|OAY83900.1| DNA-directed RNA polymerase I subunit 1 [Ananas c... 87 5e-17
ref|XP_020114580.1| DNA-directed RNA polymerase I subunit 1 [Ana... 87 5e-17
gb|PAN23323.1| hypothetical protein PAHAL_D00879 [Panicum hallii] 74 1e-12
gb|PAN23321.1| hypothetical protein PAHAL_D00879 [Panicum hallii] 74 1e-12
gb|PAN23322.1| hypothetical protein PAHAL_D00879 [Panicum hallii] 74 1e-12
gb|KQL11441.1| hypothetical protein SETIT_005673mg [Setaria ital... 72 5e-12
ref|XP_022681373.1| DNA-directed RNA polymerase I subunit 1 [Set... 72 5e-12
ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub... 71 2e-11
ref|XP_015866147.1| PREDICTED: DNA-directed RNA polymerase I sub... 70 4e-11
ref|NP_001325828.1| nuclear RNA polymerase A1 [Arabidopsis thali... 69 1e-10
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana... 69 1e-10
gb|OQU78380.1| hypothetical protein SORBI_3009G217200 [Sorghum b... 69 1e-10
ref|XP_021659464.1| DNA-directed RNA polymerase I subunit 1 isof... 69 1e-10
>gb|ONK70128.1| uncharacterized protein A4U43_C05F30550 [Asparagus officinalis]
Length = 595
Score = 133 bits (334), Expect = 1e-33
Identities = 69/109 (63%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Frame = -2
Query: 407 EASAMHDVFFAEGSEGENDIKEKSATTS-CELATDSKDAKKNTWTSLQYAEAISVISVMM 231
++S+++D+ +AE D KEK+ T CE DSK+AK N+WTSLQY EAIS ++++M
Sbjct: 139 DSSSVYDIIYAE------DSKEKNITIHPCESGRDSKNAKDNSWTSLQYVEAISALNIIM 192
Query: 230 KSRAK-CANCGKNNPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPST 87
K+R K CANCGK+N KISSPTFGWL KTVK SDI ANFIRESNVGLPST
Sbjct: 193 KNRPKKCANCGKSNLKISSPTFGWLSKTVKHSDITANFIRESNVGLPST 241
>ref|XP_020265363.1| LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit 1
[Asparagus officinalis]
Length = 1630
Score = 133 bits (334), Expect = 2e-33
Identities = 69/109 (63%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Frame = -2
Query: 407 EASAMHDVFFAEGSEGENDIKEKSATTS-CELATDSKDAKKNTWTSLQYAEAISVISVMM 231
++S+++D+ +AE D KEK+ T CE DSK+AK N+WTSLQY EAIS ++++M
Sbjct: 139 DSSSVYDIIYAE------DSKEKNITIHPCESGRDSKNAKDNSWTSLQYVEAISALNIIM 192
Query: 230 KSRAK-CANCGKNNPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPST 87
K+R K CANCGK+N KISSPTFGWL KTVK SDI ANFIRESNVGLPST
Sbjct: 193 KNRPKKCANCGKSNLKISSPTFGWLSKTVKHSDITANFIRESNVGLPST 241
>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Elaeis
guineensis]
Length = 1674
Score = 93.2 bits (230), Expect = 2e-19
Identities = 55/132 (41%), Positives = 81/132 (61%), Gaps = 3/132 (2%)
Frame = -2
Query: 407 EASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMK 228
EA + + +F +G E E+ + +T+ L + ++ TWTSLQY+EAIS++S ++
Sbjct: 141 EAHSWGEYYFPDGGETESAV----ISTNESLLKITNLKQQQTWTSLQYSEAISIMSKFLR 196
Query: 227 SRAK-CANCGKNNPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPST--XXXXXXXXXX 57
++K CANCG+ NP I+SPTFGWL K ++ SDIR NFI ++GL ST
Sbjct: 197 EKSKKCANCGRKNPTITSPTFGWLNKAMQASDIRTNFIIGYDLGLSSTEDQNAEGSQPRG 256
Query: 56 XXASQSDEELST 21
ASQ+DEE S+
Sbjct: 257 DSASQTDEEPSS 268
>ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Phoenix
dactylifera]
Length = 1665
Score = 92.8 bits (229), Expect = 3e-19
Identities = 44/92 (47%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Frame = -2
Query: 359 ENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMKSRAK-CANCGKNNPKI 183
E + K + TS L+ + ++ TWTSLQ++EA+S++S ++ ++K CANC + NP I
Sbjct: 153 EEETKSAAIHTSESLSKITNLKQQQTWTSLQHSEALSILSKFLREKSKKCANCSRKNPTI 212
Query: 182 SSPTFGWLCKTVKDSDIRANFIRESNVGLPST 87
+SPTFGWL K ++ SDIR+NFI ES++GL ST
Sbjct: 213 TSPTFGWLNKAIQASDIRSNFIMESDLGLSST 244
>ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Musa
acuminata subsp. malaccensis]
Length = 1640
Score = 90.1 bits (222), Expect = 3e-18
Identities = 53/108 (49%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = -2
Query: 407 EASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMK 228
EA++ ++FF E E S T S + AK TWTSLQ +EA+SV+S M+
Sbjct: 138 EANSWSEIFFPEEGTAE------SVTPS-----NFDKAKHLTWTSLQQSEALSVLSKFMR 186
Query: 227 SRAK-CANCGKNNPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPST 87
R K C NCGK NP I SP FGWL KT + SDIRANFI +SN+ L S+
Sbjct: 187 ERRKKCDNCGKKNPTIHSPIFGWLNKTTQGSDIRANFIIDSNLDLSSS 234
>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
Length = 1669
Score = 88.6 bits (218), Expect = 1e-17
Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Frame = -2
Query: 365 EGENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMKSRAK-CANCGKNNP 189
EGE + K +T+ L + ++ TWTSLQY+EA+S++S ++ ++K CANCG+ NP
Sbjct: 149 EGE-ETKSAVISTNESLLKITNLKQQQTWTSLQYSEALSIMSKFLREKSKKCANCGRKNP 207
Query: 188 KISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDSAP 9
I+SPTFGWL K ++ SDIR NFI ++GL ST S+ D TD P
Sbjct: 208 TITSPTFGWLNKAMQASDIRTNFIIGYDLGLSST----EDQNAEASQSRGDSASQTDEEP 263
Query: 8 TN 3
++
Sbjct: 264 SS 265
>ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Musa
acuminata subsp. malaccensis]
Length = 1641
Score = 88.2 bits (217), Expect = 1e-17
Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Frame = -2
Query: 407 EASAMHDVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMK 228
EA+ ++FF E E S T++ D+ ++K TWTSLQ +EA+S+ S M+
Sbjct: 137 EANTWSEIFFPEEETAE------SITSNF----DNANSKHLTWTSLQQSEALSIFSKFMR 186
Query: 227 SRAK-CANCGKNNPKISSPTFGWLCKTVKDSDIRANFIRESNVGLPST 87
R K C NCGK NP I+SP FGWL KT ++SDIRANFI +S++ S+
Sbjct: 187 ERRKKCDNCGKKNPTINSPIFGWLNKTTQESDIRANFILDSSLDQSSS 234
>gb|OAY83900.1| DNA-directed RNA polymerase I subunit 1 [Ananas comosus]
Length = 869
Score = 86.7 bits (213), Expect = 5e-17
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = -2
Query: 344 EKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMKS-RAKCANCGKNNPKISSPTF 168
E ++ C + S + K+ TWTSLQY EA+SV+S +M+ R KC NC NP I+SPTF
Sbjct: 44 ETVSSADCTGESFSSNPKQRTWTSLQYTEALSVLSKLMREKRKKCNNCEAKNPTITSPTF 103
Query: 167 GWLCKTVKDSDIRANFIRESNVGLPST 87
GWL K V+ SD+RAN I S + ST
Sbjct: 104 GWLNKIVRSSDVRANIIARSEIEQSST 130
>ref|XP_020114580.1| DNA-directed RNA polymerase I subunit 1 [Ananas comosus]
ref|XP_020114581.1| DNA-directed RNA polymerase I subunit 1 [Ananas comosus]
Length = 1633
Score = 86.7 bits (213), Expect = 5e-17
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = -2
Query: 344 EKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMKS-RAKCANCGKNNPKISSPTF 168
E ++ C + S + K+ TWTSLQY EA+SV+S +M+ R KC NC NP I+SPTF
Sbjct: 154 ETVSSADCTGESFSSNPKQRTWTSLQYTEALSVLSKLMREKRKKCNNCEAKNPTITSPTF 213
Query: 167 GWLCKTVKDSDIRANFIRESNVGLPST 87
GWL K V+ SD+RAN I S + ST
Sbjct: 214 GWLNKIVRSSDVRANIIARSEIEQSST 240
>gb|PAN23323.1| hypothetical protein PAHAL_D00879 [Panicum hallii]
Length = 1584
Score = 73.9 bits (180), Expect = 1e-12
Identities = 42/89 (47%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = -2
Query: 374 EGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMKSRAK-CANCGK 198
E S E D ++ + TS + ++ KD K TWTS+Q E +S+ S +MK RAK CANC
Sbjct: 84 EASLSEED-EDTTEATSGDKSSPEKD--KKTWTSIQLKEILSIFSKIMKKRAKKCANCDM 140
Query: 197 NNPKISSPTFGWLCKTVKDSDIRANFIRE 111
NP ISSP FGWL K S +RAN I +
Sbjct: 141 KNPSISSPIFGWLVKDRSASAVRANAIAD 169
>gb|PAN23321.1| hypothetical protein PAHAL_D00879 [Panicum hallii]
Length = 1611
Score = 73.9 bits (180), Expect = 1e-12
Identities = 42/89 (47%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = -2
Query: 374 EGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMKSRAK-CANCGK 198
E S E D ++ + TS + ++ KD K TWTS+Q E +S+ S +MK RAK CANC
Sbjct: 84 EASLSEED-EDTTEATSGDKSSPEKD--KKTWTSIQLKEILSIFSKIMKKRAKKCANCDM 140
Query: 197 NNPKISSPTFGWLCKTVKDSDIRANFIRE 111
NP ISSP FGWL K S +RAN I +
Sbjct: 141 KNPSISSPIFGWLVKDRSASAVRANAIAD 169
>gb|PAN23322.1| hypothetical protein PAHAL_D00879 [Panicum hallii]
Length = 1613
Score = 73.9 bits (180), Expect = 1e-12
Identities = 42/89 (47%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = -2
Query: 374 EGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMKSRAK-CANCGK 198
E S E D ++ + TS + ++ KD K TWTS+Q E +S+ S +MK RAK CANC
Sbjct: 84 EASLSEED-EDTTEATSGDKSSPEKD--KKTWTSIQLKEILSIFSKIMKKRAKKCANCDM 140
Query: 197 NNPKISSPTFGWLCKTVKDSDIRANFIRE 111
NP ISSP FGWL K S +RAN I +
Sbjct: 141 KNPSISSPIFGWLVKDRSASAVRANAIAD 169
>gb|KQL11441.1| hypothetical protein SETIT_005673mg [Setaria italica]
Length = 1667
Score = 72.4 bits (176), Expect = 5e-12
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = -2
Query: 377 AEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMKSRAK-CANCG 201
A SE + DI E TSC+ + KD K TWTS+Q E +S+ S +MK R K CA C
Sbjct: 147 ASPSEEDEDITE---ATSCDKPSPEKD--KKTWTSVQLKEVLSIFSKIMKKRQKKCAKCD 201
Query: 200 KNNPKISSPTFGWLCKTVKDSDIRANFIRE 111
+P SSP FGWL K S +RAN I +
Sbjct: 202 MKSPTFSSPIFGWLVKDTSASAVRANAIAD 231
>ref|XP_022681373.1| DNA-directed RNA polymerase I subunit 1 [Setaria italica]
Length = 1754
Score = 72.4 bits (176), Expect = 5e-12
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = -2
Query: 377 AEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMKSRAK-CANCG 201
A SE + DI E TSC+ + KD K TWTS+Q E +S+ S +MK R K CA C
Sbjct: 147 ASPSEEDEDITE---ATSCDKPSPEKD--KKTWTSVQLKEVLSIFSKIMKKRQKKCAKCD 201
Query: 200 KNNPKISSPTFGWLCKTVKDSDIRANFIRE 111
+P SSP FGWL K S +RAN I +
Sbjct: 202 MKSPTFSSPIFGWLVKDTSASAVRANAIAD 231
>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Nelumbo
nucifera]
Length = 1676
Score = 70.9 bits (172), Expect = 2e-11
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Frame = -2
Query: 359 ENDIKEKSATT--SCELATDSKDAKKNTWTSLQYAEAISVISVMMKSR-AKCANCGKNNP 189
END+ K+ T S + + +++ WTSLQY EA+SV+ MK + ++C NCG +P
Sbjct: 166 ENDLTHKTDTAIHSVDQNCNPMHLQEHHWTSLQYKEAMSVLGDFMKDKHSRCQNCGAKSP 225
Query: 188 KISSPTFGWLCKTVKDSDIRANFIR 114
I+ PTFGW + ++DIRAN +R
Sbjct: 226 SITCPTFGWFHMNMSNADIRANVLR 250
>ref|XP_015866147.1| PREDICTED: DNA-directed RNA polymerase I subunit 1 [Ziziphus
jujuba]
Length = 1767
Score = 69.7 bits (169), Expect = 4e-11
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 20/119 (16%)
Frame = -2
Query: 305 SKDAKKNTWTSLQYAEAISVISVMMKSRA--------------------KCANCGKNNPK 186
S ++K+ WTSL + E +SV+ ++K + KC NC NPK
Sbjct: 158 SAESKQQVWTSLHFTEVMSVLKKVLKPNSAKRDSVKQNPFKQKNKLKTTKCMNCSAKNPK 217
Query: 185 ISSPTFGWLCKTVKDSDIRANFIRESNVGLPSTXXXXXXXXXXXXASQSDEELSTDSAP 9
IS PTFGWL K++ + IRAN I SN+ P S SDEE+ DS P
Sbjct: 218 ISRPTFGWLHKSMSGAHIRANVISGSNIEGP-------FADGHQETSVSDEEIINDSPP 269
>ref|NP_001325828.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
gb|ANM63757.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
Length = 1657
Score = 68.6 bits (166), Expect = 1e-10
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Frame = -2
Query: 389 DVFFAEGSEGENDIKEKSATTSCE--LATDSK------DAKKNTWTSLQYAEAISVISVM 234
D+ A+ E K KS+ SCE + TDS D + WTSLQ+AE +V+
Sbjct: 133 DIVSAKQLESNTPTKSKSSDESCESVVTTDSSEECEDSDVEDQRWTSLQFAEVTAVLKNF 192
Query: 233 MKSRAK-CANCGKNNPKISSPTFGWL-CKTVKDSDIRANFIR 114
M+ +K C+ C NPK+ P FGW+ + +KDSD+ AN IR
Sbjct: 193 MRLSSKSCSRCKGINPKLEKPMFGWVRMRAMKDSDVGANVIR 234
>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
sp|Q9SVY0.1|NRPA1_ARATH RecName: Full=DNA-directed RNA polymerase I subunit 1; AltName:
Full=DNA-directed RNA polymerase I subunit RPA1;
Short=DNA polymerase I subunit A1; AltName: Full=Nuclear
RNA polymerase A1
emb|CAB41189.1| DNA-directed RNA polymerase I 190K chain-like protein [Arabidopsis
thaliana]
gb|AEE79684.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
Length = 1670
Score = 68.6 bits (166), Expect = 1e-10
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Frame = -2
Query: 389 DVFFAEGSEGENDIKEKSATTSCE--LATDSK------DAKKNTWTSLQYAEAISVISVM 234
D+ A+ E K KS+ SCE + TDS D + WTSLQ+AE +V+
Sbjct: 146 DIVSAKQLESNTPTKSKSSDESCESVVTTDSSEECEDSDVEDQRWTSLQFAEVTAVLKNF 205
Query: 233 MKSRAK-CANCGKNNPKISSPTFGWL-CKTVKDSDIRANFIR 114
M+ +K C+ C NPK+ P FGW+ + +KDSD+ AN IR
Sbjct: 206 MRLSSKSCSRCKGINPKLEKPMFGWVRMRAMKDSDVGANVIR 247
>gb|OQU78380.1| hypothetical protein SORBI_3009G217200 [Sorghum bicolor]
Length = 1676
Score = 68.6 bits (166), Expect = 1e-10
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = -2
Query: 368 SEGENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMKSR-AKCANCGKNN 192
SE + +I E TTS + ++ KD K TWTS+Q E +S+ S +MK R KCA C +
Sbjct: 94 SEEDENITE---TTSGDKSSSVKDNK--TWTSVQLKEVLSIFSKIMKKRQTKCAKCDMKS 148
Query: 191 PKISSPTFGWLCKTVKDSDIRANFIRE 111
P ISSP FGWL K S +RAN I +
Sbjct: 149 PTISSPIFGWLVKDTSASAVRANAIAD 175
>ref|XP_021659464.1| DNA-directed RNA polymerase I subunit 1 isoform X2 [Hevea
brasiliensis]
Length = 1700
Score = 68.6 bits (166), Expect = 1e-10
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = -2
Query: 389 DVFFAEGSEGENDIKEKSATTSCELATDSKDAKKNTWTSLQYAEAISVISVMMKSR-AKC 213
+ + E S+G ++ S S L + + K+ WTSLQ +EA+SV++ +K++ KC
Sbjct: 144 EALYPEDSDGSHE--SCSTIHSGALYHNVEHMKQQGWTSLQLSEAMSVLNNFLKAKFKKC 201
Query: 212 ANCGKNNPKISSPTFGWL-CKTVKDSDIRANFIRESNVGLP 93
NC + NP I+ PTFGW + D+ IRAN IR S +G P
Sbjct: 202 KNCERANPNITKPTFGWFHTSGMSDASIRANVIRASKLGGP 242