BLASTX nr result

ID: Ophiopogon23_contig00006386 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00006386
         (349 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020267108.1| ubiquitin-conjugating enzyme E2 32 [Asparagu...    67   8e-11

>ref|XP_020267108.1| ubiquitin-conjugating enzyme E2 32 [Asparagus officinalis]
 gb|ONK67593.1| uncharacterized protein A4U43_C05F1700 [Asparagus officinalis]
          Length = 303

 Score = 67.4 bits (163), Expect = 8e-11
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = +2

Query: 5   QPKPKTDRLFSVAALGLAVAITFFLVKKYLKSHGLPGFTEGM 130
           Q +PK+DRLFSVAA GLAVAI   LVKKY+KSHG+PGF EG+
Sbjct: 262 QQQPKSDRLFSVAAFGLAVAIVILLVKKYVKSHGIPGFMEGL 303


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