BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00006231
         (597 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248699.1| pre-mRNA-processing factor 39 isoform X1 [As...    96   2e-19
ref|XP_008785146.1| PREDICTED: pre-mRNA-processing factor 39 [Ph...    76   2e-12
ref|XP_010934229.1| PREDICTED: pre-mRNA-processing factor 39-lik...    72   3e-11
ref|XP_008801264.2| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...    68   8e-10
ref|XP_010920282.1| PREDICTED: pre-mRNA-processing factor 39-lik...    59   8e-07

>ref|XP_020248699.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
 ref|XP_020248700.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
 ref|XP_020248701.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
 gb|ONK57321.1| uncharacterized protein A4U43_C10F18870 [Asparagus officinalis]
          Length = 817

 Score = 96.3 bits (238), Expect = 2e-19
 Identities = 59/141 (41%), Positives = 72/141 (51%)
 Frame = -3

Query: 424 VASEASTMTVDPSPCVHAEHTGADTAAESGGEELTXXXXXXXXXXXXXXSNPGCGNMHSQ 245
           VA+E+ T T+     V A      T  ESGGEE T              S    GN+ +Q
Sbjct: 7   VATESVTATIPAKEIVRA------TVPESGGEEATHACSAGVAYASADGSKLADGNVQNQ 60

Query: 244 DVNSVTLDVAQSVDYECKPEVTAXXXXXXXXXXXNPADMHANSVGYEAVNGSAGELGSYQ 65
           DVN  T D A SV Y  KPEV             N   MHA+ VGY+ VNG+  ++G+YQ
Sbjct: 61  DVNLGTQDAAHSVTYGSKPEVEGVAAGANVANYENSTGMHAHQVGYDLVNGNTCDMGNYQ 120

Query: 64  SSGAIENGIPSNEAGAPAAEQ 2
           SSG  ENG+PS E G PAAE+
Sbjct: 121 SSGGTENGVPSTEVGEPAAEK 141


>ref|XP_008785146.1| PREDICTED: pre-mRNA-processing factor 39 [Phoenix dactylifera]
 ref|XP_008785147.1| PREDICTED: pre-mRNA-processing factor 39 [Phoenix dactylifera]
          Length = 829

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
 Frame = -3

Query: 379 VHAEHTGADTAAESGGEEL-TXXXXXXXXXXXXXXSNPGCGNMHSQDVNSVTLDVAQSVD 203
           V AE+   D+AA SGGE L +              +NP   NM+SQD NSV       + 
Sbjct: 23  VPAEYPMTDSAALSGGENLVSSAPTAPTDCALSDGTNPDDRNMYSQDPNSVAQSATYGIT 82

Query: 202 YECKPEVTAXXXXXXXXXXXNPADMHANSVGYEAVNGSAGELGSYQSSGAIENGIPSNEA 23
           YE KP+  A             A +  ++ GY+++NG AGE+ SYQ +G IENG  SN  
Sbjct: 83  YESKPDGGAAVATENAIGHETVAGISTHTTGYDSMNGGAGEMASYQPTGVIENGDLSNAV 142

Query: 22  GAPAAEQ 2
           G    +Q
Sbjct: 143 GGTVVQQ 149


>ref|XP_010934229.1| PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
          Length = 833

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
 Frame = -3

Query: 424 VASEASTMTVDPSPCVH--AEHTGADTAAESGGEEL-TXXXXXXXXXXXXXXSNPGCGNM 254
           V S+AS+   D S   H  AE+   D+AA SGGE L +              +N    NM
Sbjct: 7   VVSQASS-AADYSSTAHVPAEYPMTDSAAPSGGEGLVSSVPTAATDYALSDGTNLDERNM 65

Query: 253 HSQDVNSVTLDVAQSVDYECKPEVTAXXXXXXXXXXXNPADMHANSVGYEAVNGSAGELG 74
           +SQ+ NSV  +    + YE KP+  A             A +  ++ GY+++NG AGEL 
Sbjct: 66  YSQEPNSVEQNATYGMAYESKPDGGAAVASENAIGHETVAGISTHTTGYDSMNGGAGELA 125

Query: 73  SYQSSGAIENGIPSNEAGAPAAEQ 2
           SYQ +G +ENG  SN+ G    +Q
Sbjct: 126 SYQPTGVVENGDLSNDVGGTVVQQ 149


>ref|XP_008801264.2| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 39-like
           [Phoenix dactylifera]
          Length = 824

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 36/91 (39%), Positives = 51/91 (56%)
 Frame = -3

Query: 274 NPGCGNMHSQDVNSVTLDVAQSVDYECKPEVTAXXXXXXXXXXXNPADMHANSVGYEAVN 95
           NPG GNM+SQD NSV  +   +  YE KP+  A             A +  ++ GY+++N
Sbjct: 55  NPGNGNMYSQDTNSVAQNAGMA--YESKPDDGAAVASEIAIGHETVAGISTHTTGYDSMN 112

Query: 94  GSAGELGSYQSSGAIENGIPSNEAGAPAAEQ 2
           G+A E+  YQS+G IENG  SN+ G    +Q
Sbjct: 113 GAASEVAIYQSTGVIENGGLSNDVGGTVVQQ 143


>ref|XP_010920282.1| PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
 ref|XP_010920283.1| PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
 ref|XP_010920284.1| PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
 ref|XP_010920285.1| PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
          Length = 821

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 33/91 (36%), Positives = 50/91 (54%)
 Frame = -3

Query: 274 NPGCGNMHSQDVNSVTLDVAQSVDYECKPEVTAXXXXXXXXXXXNPADMHANSVGYEAVN 95
           NP  GNM++Q+ NSV  +   +  YE K +                AD+ +++ GY+++N
Sbjct: 55  NPRNGNMYNQENNSVAQNAGMA--YESKTDDGTAVASEIGIGHETVADISSHTTGYDSMN 112

Query: 94  GSAGELGSYQSSGAIENGIPSNEAGAPAAEQ 2
           G A E  SYQS+G IENG  SN+ G+   +Q
Sbjct: 113 GGASEGASYQSTGVIENGGFSNDVGSTVLQQ 143