BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00006230
         (792 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248699.1| pre-mRNA-processing factor 39 isoform X1 [As...   129   3e-30
ref|XP_010934229.1| PREDICTED: pre-mRNA-processing factor 39-lik...   100   4e-20
ref|XP_008785146.1| PREDICTED: pre-mRNA-processing factor 39 [Ph...    89   3e-16
ref|XP_008801264.2| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...    85   6e-15
ref|XP_018686121.1| PREDICTED: pre-mRNA-processing factor 39 iso...    75   1e-11
ref|XP_018686120.1| PREDICTED: pre-mRNA-processing factor 39 iso...    75   1e-11
ref|XP_009411386.1| PREDICTED: pre-mRNA-processing factor 39 iso...    75   1e-11
ref|XP_010920282.1| PREDICTED: pre-mRNA-processing factor 39-lik...    75   1e-11
ref|XP_020093429.1| pre-mRNA-processing factor 39 isoform X1 [An...    59   4e-06

>ref|XP_020248699.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
 ref|XP_020248700.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
 ref|XP_020248701.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
 gb|ONK57321.1| uncharacterized protein A4U43_C10F18870 [Asparagus officinalis]
          Length = 817

 Score =  129 bits (324), Expect = 3e-30
 Identities = 73/147 (49%), Positives = 86/147 (58%)
 Frame = -3

Query: 442 MEVSQPVASEASAMTVDPSPCVHAEHTGADMVAESGGEELTSVSTGGVVYASVDGSNLGC 263
           ME SQPVA+E+   T+     V A       V ESGGEE T   + GV YAS DGS L  
Sbjct: 1   MEGSQPVATESVTATIPAKEIVRAT------VPESGGEEATHACSAGVAYASADGSKLAD 54

Query: 262 GNVRSQDVNSVTLDAAQSVAYESKPXXXXXXXXXXXXXXXNPADMHAHSVGYESVNGSAG 83
           GNV++QDVN  T DAA SV Y SKP               N   MHAH VGY+ VNG+  
Sbjct: 55  GNVQNQDVNLGTQDAAHSVTYGSKPEVEGVAAGANVANYENSTGMHAHQVGYDLVNGNTC 114

Query: 82  ELGSYQSSGAIENGIPSNEAGAPAAEQ 2
           ++G+YQSSG  ENG+PS E G PAAE+
Sbjct: 115 DMGNYQSSGGTENGVPSTEVGEPAAEK 141


>ref|XP_010934229.1| PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
          Length = 833

 Score =  100 bits (248), Expect = 4e-20
 Identities = 64/150 (42%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
 Frame = -3

Query: 442 MEVSQPVASEASAMTVDPSPCVH--AEHTGADMVAESGGEEL-TSVSTGGVVYASVDGSN 272
           ME SQ V S+AS+   D S   H  AE+   D  A SGGE L +SV T    YA  DG+N
Sbjct: 1   MEDSQAVVSQASS-AADYSSTAHVPAEYPMTDSAAPSGGEGLVSSVPTAATDYALSDGTN 59

Query: 271 LGCGNVRSQDVNSVTLDAAQSVAYESKPXXXXXXXXXXXXXXXNPADMHAHSVGYESVNG 92
           L   N+ SQ+ NSV  +A   +AYESKP                 A +  H+ GY+S+NG
Sbjct: 60  LDERNMYSQEPNSVEQNATYGMAYESKPDGGAAVASENAIGHETVAGISTHTTGYDSMNG 119

Query: 91  SAGELGSYQSSGAIENGIPSNEAGAPAAEQ 2
            AGEL SYQ +G +ENG  SN+ G    +Q
Sbjct: 120 GAGELASYQPTGVVENGDLSNDVGGTVVQQ 149


>ref|XP_008785146.1| PREDICTED: pre-mRNA-processing factor 39 [Phoenix dactylifera]
 ref|XP_008785147.1| PREDICTED: pre-mRNA-processing factor 39 [Phoenix dactylifera]
          Length = 829

 Score = 89.0 bits (219), Expect = 3e-16
 Identities = 60/149 (40%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
 Frame = -3

Query: 442 MEVSQPVASEAS-AMTVDPSPCVHAEHTGADMVAESGGEEL-TSVSTGGVVYASVDGSNL 269
           ME SQ V S+AS A     +  V AE+   D  A SGGE L +S  T     A  DG+N 
Sbjct: 1   MEDSQSVVSQASNAADYVSTGHVPAEYPMTDSAALSGGENLVSSAPTAPTDCALSDGTNP 60

Query: 268 GCGNVRSQDVNSVTLDAAQSVAYESKPXXXXXXXXXXXXXXXNPADMHAHSVGYESVNGS 89
              N+ SQD NSV   A   + YESKP                 A +  H+ GY+S+NG 
Sbjct: 61  DDRNMYSQDPNSVAQSATYGITYESKPDGGAAVATENAIGHETVAGISTHTTGYDSMNGG 120

Query: 88  AGELGSYQSSGAIENGIPSNEAGAPAAEQ 2
           AGE+ SYQ +G IENG  SN  G    +Q
Sbjct: 121 AGEMASYQPTGVIENGDLSNAVGGTVVQQ 149


>ref|XP_008801264.2| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 39-like
           [Phoenix dactylifera]
          Length = 824

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 60/149 (40%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
 Frame = -3

Query: 442 MEVSQPVASEASAMTVDPSP-CVHAEHTGADMVAESGGEELTS-VSTGGVVYASVDGSNL 269
           M+ SQ   S+AS +    S   V AE+     +  SGGE L S V T    YA  D SN 
Sbjct: 1   MDDSQSAVSQASNVAEYSSTGLVPAEYP----MTNSGGEGLVSCVPTAATDYALSDSSNP 56

Query: 268 GCGNVRSQDVNSVTLDAAQSVAYESKPXXXXXXXXXXXXXXXNPADMHAHSVGYESVNGS 89
           G GN+ SQD NSV  +A   +AYESKP                 A +  H+ GY+S+NG+
Sbjct: 57  GNGNMYSQDTNSVAQNAG--MAYESKPDDGAAVASEIAIGHETVAGISTHTTGYDSMNGA 114

Query: 88  AGELGSYQSSGAIENGIPSNEAGAPAAEQ 2
           A E+  YQS+G IENG  SN+ G    +Q
Sbjct: 115 ASEVAIYQSTGVIENGGLSNDVGGTVVQQ 143


>ref|XP_018686121.1| PREDICTED: pre-mRNA-processing factor 39 isoform X3 [Musa acuminata
           subsp. malaccensis]
          Length = 818

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
 Frame = -3

Query: 442 MEVSQPVASEASAMT-VDPSPCVHAEH--TGADMVAESGGEELTSVSTGGVVYASVDGSN 272
           ME SQP+  +AS +T    S  V AE+  T +D V  S G  + SVS+G   ++S+DGS 
Sbjct: 1   MEGSQPLLYQASVVTEYTSSDHVPAENMATNSDSVM-SDGNLVHSVSSGATAHSSLDGSG 59

Query: 271 LGCGNVRSQDVNSVTLDAAQSVAYESKPXXXXXXXXXXXXXXXNPADMHAHSVGYESVNG 92
              GN  S D+N V+ +A   V YE                    A +    VGY++ NG
Sbjct: 60  TDDGNTYSHDLNPVSQEATTGVVYEPNASAATVSHENM-------AGISTQVVGYDTANG 112

Query: 91  SAGELGSYQSSGAIENG-IPSNEAGA 17
           S  E+ +YQS+GA+ENG +P++ +GA
Sbjct: 113 SISEMANYQSTGAMENGSLPTDTSGA 138


>ref|XP_018686120.1| PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 819

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
 Frame = -3

Query: 442 MEVSQPVASEASAMT-VDPSPCVHAEH--TGADMVAESGGEELTSVSTGGVVYASVDGSN 272
           ME SQP+  +AS +T    S  V AE+  T +D V  S G  + SVS+G   ++S+DGS 
Sbjct: 1   MEGSQPLLYQASVVTEYTSSDHVPAENMATNSDSVM-SDGNLVHSVSSGATAHSSLDGSG 59

Query: 271 LGCGNVRSQDVNSVTLDAAQSVAYESKPXXXXXXXXXXXXXXXNPADMHAHSVGYESVNG 92
              GN  S D+N V+ +A   V YE                    A +    VGY++ NG
Sbjct: 60  TDDGNTYSHDLNPVSQEATTGVVYEPNASAATVSHENM-------AGISTQVVGYDTANG 112

Query: 91  SAGELGSYQSSGAIENG-IPSNEAGA 17
           S  E+ +YQS+GA+ENG +P++ +GA
Sbjct: 113 SISEMANYQSTGAMENGSLPTDTSGA 138


>ref|XP_009411386.1| PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Musa acuminata
           subsp. malaccensis]
 ref|XP_018686118.1| PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Musa acuminata
           subsp. malaccensis]
 ref|XP_018686119.1| PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 820

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
 Frame = -3

Query: 442 MEVSQPVASEASAMT-VDPSPCVHAEH--TGADMVAESGGEELTSVSTGGVVYASVDGSN 272
           ME SQP+  +AS +T    S  V AE+  T +D V  S G  + SVS+G   ++S+DGS 
Sbjct: 1   MEGSQPLLYQASVVTEYTSSDHVPAENMATNSDSVM-SDGNLVHSVSSGATAHSSLDGSG 59

Query: 271 LGCGNVRSQDVNSVTLDAAQSVAYESKPXXXXXXXXXXXXXXXNPADMHAHSVGYESVNG 92
              GN  S D+N V+ +A   V YE                    A +    VGY++ NG
Sbjct: 60  TDDGNTYSHDLNPVSQEATTGVVYEPNASAATVSHENM-------AGISTQVVGYDTANG 112

Query: 91  SAGELGSYQSSGAIENG-IPSNEAGA 17
           S  E+ +YQS+GA+ENG +P++ +GA
Sbjct: 113 SISEMANYQSTGAMENGSLPTDTSGA 138


>ref|XP_010920282.1| PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
 ref|XP_010920283.1| PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
 ref|XP_010920284.1| PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
 ref|XP_010920285.1| PREDICTED: pre-mRNA-processing factor 39-like [Elaeis guineensis]
          Length = 821

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 58/149 (38%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
 Frame = -3

Query: 442 MEVSQPVASEASAMTVDPSP-CVHAEHTGADMVAESGGEELTSVS-TGGVVYASVDGSNL 269
           ME SQ V S+AS +    S   V AE+     +  SGGE L S   T    YA    SN 
Sbjct: 1   MEDSQLVVSQASNVAEYSSTGLVPAEYP----MTNSGGEGLVSCEPTAATDYALSGSSNP 56

Query: 268 GCGNVRSQDVNSVTLDAAQSVAYESKPXXXXXXXXXXXXXXXNPADMHAHSVGYESVNGS 89
             GN+ +Q+ NSV  +A   +AYESK                  AD+ +H+ GY+S+NG 
Sbjct: 57  RNGNMYNQENNSVAQNAG--MAYESKTDDGTAVASEIGIGHETVADISSHTTGYDSMNGG 114

Query: 88  AGELGSYQSSGAIENGIPSNEAGAPAAEQ 2
           A E  SYQS+G IENG  SN+ G+   +Q
Sbjct: 115 ASEGASYQSTGVIENGGFSNDVGSTVLQQ 143


>ref|XP_020093429.1| pre-mRNA-processing factor 39 isoform X1 [Ananas comosus]
 ref|XP_020093430.1| pre-mRNA-processing factor 39 isoform X1 [Ananas comosus]
          Length = 833

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
 Frame = -3

Query: 442 MEVSQPVASEASAMTVDPSPC-VHAEHTGADMVAESGGEELTSVSTGGVVYASVDGSNLG 266
           ME SQ V   A A T  PS   + A +  ++  A + G E    S+   VYASVD +N  
Sbjct: 1   MEDSQFVVPPAVASTDYPSTGQLPAGYAASNPDATAAGGEADPASSAAAVYASVDNTNPE 60

Query: 265 CGNVRSQDVNSVTLDAAQSVAYESKPXXXXXXXXXXXXXXXNPADMHAHSVGYESVNGSA 86
              +  Q+  SV  +A   +A ES+                  A    + V Y S+NG+A
Sbjct: 61  A-KIEIQNSGSVAQEATYGMASESENDNEASGAGQNIGSQDTTAS--TYPVDYSSLNGTA 117

Query: 85  GELGSYQSSGAIENGIPSNEAGAPAAEQ 2
            ++ SYQS+G  ENG+ +N+A      Q
Sbjct: 118 ADVASYQSTGVTENGVLTNDASGQVLGQ 145