BLASTX nr result

ID: Ophiopogon23_contig00006210 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00006210
         (413 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273375.1| ubiquitin carboxyl-terminal hydrolase 24 [As...    60   1e-07
ref|XP_008775014.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    55   4e-06
ref|XP_010938651.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    55   5e-06

>ref|XP_020273375.1| ubiquitin carboxyl-terminal hydrolase 24 [Asparagus officinalis]
 gb|ONK63490.1| uncharacterized protein A4U43_C07F15690 [Asparagus officinalis]
          Length = 558

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -3

Query: 117 MSDHKVFIFGSFTEDETRLFQSQSAQKSHVRPLEKTG 7
           MSD +VFIFGSFTEDET+LFQSQSAQKS   P EK G
Sbjct: 1   MSDQQVFIFGSFTEDETKLFQSQSAQKSRKPPSEKNG 37


>ref|XP_008775014.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like isoform X1
           [Phoenix dactylifera]
          Length = 540

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -3

Query: 117 MSDHKVFIFGSFTEDETRLFQSQSAQKSHVRPLEKTG 7
           MSDHKV IFGSFTEDETRLFQ Q  + S+V PLEK G
Sbjct: 1   MSDHKVLIFGSFTEDETRLFQRQLVE-SNVHPLEKAG 36


>ref|XP_010938651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 isoform X2
           [Elaeis guineensis]
          Length = 541

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = -3

Query: 117 MSDHKVFIFGSFTEDETRLFQSQSAQKSHVRPLEKTGSE 1
           MSDHKV +FGSFTEDETR FQSQ  + ++VRPLEK  S+
Sbjct: 1   MSDHKVLLFGSFTEDETRFFQSQLVE-NNVRPLEKARSQ 38


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