BLASTX nr result
ID: Ophiopogon23_contig00006175
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00006175
(618 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020245498.1| DNA excision repair protein CSB [Asparagus o... 142 2e-35
ref|XP_009386580.1| PREDICTED: protein CHROMATIN REMODELING 8 [M... 128 1e-30
ref|XP_008791073.1| PREDICTED: protein CHROMATIN REMODELING 8 is... 128 2e-30
ref|XP_008791071.1| PREDICTED: protein CHROMATIN REMODELING 8 is... 128 2e-30
ref|XP_019708486.1| PREDICTED: DNA excision repair protein CSB i... 125 2e-29
ref|XP_010929632.1| PREDICTED: DNA excision repair protein CSB i... 125 2e-29
ref|XP_010929631.1| PREDICTED: DNA excision repair protein CSB i... 125 2e-29
ref|XP_010929630.1| PREDICTED: DNA excision repair protein CSB i... 125 2e-29
ref|XP_020679616.1| DNA excision repair protein CSB isoform X2 [... 122 2e-28
ref|XP_020679614.1| DNA excision repair protein CSB isoform X1 [... 122 2e-28
gb|PKU82016.1| putative chromatin-remodeling complex ATPase chai... 122 2e-28
ref|XP_006643635.1| PREDICTED: protein CHROMATIN REMODELING 8 [O... 120 6e-28
gb|ONM30829.1| Protein CHROMATIN REMODELING 8 [Zea mays] 119 1e-27
gb|ONM30824.1| Protein CHROMATIN REMODELING 8 [Zea mays] 119 1e-27
gb|ONM30827.1| Protein CHROMATIN REMODELING 8 [Zea mays] 119 1e-27
ref|XP_008673826.1| DNA excision repair protein CSB [Zea mays] >... 119 1e-27
gb|PAN31705.1| hypothetical protein PAHAL_E03606 [Panicum hallii] 118 4e-27
ref|XP_020192030.1| DNA excision repair protein CSB [Aegilops ta... 117 7e-27
ref|XP_020106903.1| DNA excision repair protein CSB [Ananas como... 117 9e-27
dbj|BAD45511.1| putative RAD26 [Oryza sativa Japonica Group] 117 1e-26
>ref|XP_020245498.1| DNA excision repair protein CSB [Asparagus officinalis]
gb|ONK58581.1| uncharacterized protein A4U43_C09F14540 [Asparagus officinalis]
Length = 1214
Score = 142 bits (357), Expect = 2e-35
Identities = 70/97 (72%), Positives = 84/97 (86%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFR 439
LDLASSS +R G +E ++ +R+ +++AVAQPEVLIRQLCTF+QQRGG ADS SITQHF+
Sbjct: 1118 LDLASSSRERKGCIQETHRTSRSSNKIAVAQPEVLIRQLCTFIQQRGGRADSASITQHFK 1177
Query: 438 GRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
RIQSKD LFKNLLKEIATL+R A+GTRWVLKP+YR
Sbjct: 1178 DRIQSKDLPLFKNLLKEIATLERGAEGTRWVLKPEYR 1214
>ref|XP_009386580.1| PREDICTED: protein CHROMATIN REMODELING 8 [Musa acuminata subsp.
malaccensis]
Length = 1205
Score = 128 bits (322), Expect = 1e-30
Identities = 63/97 (64%), Positives = 80/97 (82%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFR 439
LDLAS+S+ + G+ E + + + PS+L +AQPEVLIRQLCTF+QQRGG DS SITQHF+
Sbjct: 1110 LDLASTSNHQHGKP-ESSHSTKPPSKLVIAQPEVLIRQLCTFIQQRGGSTDSASITQHFK 1168
Query: 438 GRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
+IQSKD LFKNLLKEIATL++DA G+RWVLK +Y+
Sbjct: 1169 DKIQSKDLPLFKNLLKEIATLEKDASGSRWVLKSEYQ 1205
>ref|XP_008791073.1| PREDICTED: protein CHROMATIN REMODELING 8 isoform X2 [Phoenix
dactylifera]
Length = 1110
Score = 128 bits (321), Expect = 2e-30
Identities = 67/97 (69%), Positives = 76/97 (78%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFR 439
LDLASS +QR R E A++ R V QPE+LIRQLCTF+QQRGG DS SITQHF+
Sbjct: 1015 LDLASSLNQRA-RIPEDTLASKPSHRYMVVQPEILIRQLCTFIQQRGGQTDSASITQHFK 1073
Query: 438 GRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
RIQSKD LFKNLLKEIATLQ+DA G+RWVLKP+YR
Sbjct: 1074 DRIQSKDLPLFKNLLKEIATLQKDAGGSRWVLKPEYR 1110
>ref|XP_008791071.1| PREDICTED: protein CHROMATIN REMODELING 8 isoform X1 [Phoenix
dactylifera]
ref|XP_008791072.1| PREDICTED: protein CHROMATIN REMODELING 8 isoform X1 [Phoenix
dactylifera]
Length = 1227
Score = 128 bits (321), Expect = 2e-30
Identities = 67/97 (69%), Positives = 76/97 (78%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFR 439
LDLASS +QR R E A++ R V QPE+LIRQLCTF+QQRGG DS SITQHF+
Sbjct: 1132 LDLASSLNQRA-RIPEDTLASKPSHRYMVVQPEILIRQLCTFIQQRGGQTDSASITQHFK 1190
Query: 438 GRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
RIQSKD LFKNLLKEIATLQ+DA G+RWVLKP+YR
Sbjct: 1191 DRIQSKDLPLFKNLLKEIATLQKDAGGSRWVLKPEYR 1227
>ref|XP_019708486.1| PREDICTED: DNA excision repair protein CSB isoform X4 [Elaeis
guineensis]
Length = 1022
Score = 125 bits (313), Expect = 2e-29
Identities = 67/98 (68%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPS-RLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHF 442
LDLASSS+QR S N A PS R V QPE+LIRQLCTF+QQRGG DS SITQHF
Sbjct: 927 LDLASSSNQR--ESIPENTVASKPSHRYMVVQPEILIRQLCTFIQQRGGQTDSASITQHF 984
Query: 441 RGRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
+ RIQSKD LFKNLLKEIA L++DA G+RWVLKP+Y+
Sbjct: 985 KDRIQSKDLPLFKNLLKEIAALEKDAGGSRWVLKPEYQ 1022
>ref|XP_010929632.1| PREDICTED: DNA excision repair protein CSB isoform X3 [Elaeis
guineensis]
Length = 1104
Score = 125 bits (313), Expect = 2e-29
Identities = 67/98 (68%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPS-RLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHF 442
LDLASSS+QR S N A PS R V QPE+LIRQLCTF+QQRGG DS SITQHF
Sbjct: 1009 LDLASSSNQR--ESIPENTVASKPSHRYMVVQPEILIRQLCTFIQQRGGQTDSASITQHF 1066
Query: 441 RGRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
+ RIQSKD LFKNLLKEIA L++DA G+RWVLKP+Y+
Sbjct: 1067 KDRIQSKDLPLFKNLLKEIAALEKDAGGSRWVLKPEYQ 1104
>ref|XP_010929631.1| PREDICTED: DNA excision repair protein CSB isoform X2 [Elaeis
guineensis]
Length = 1105
Score = 125 bits (313), Expect = 2e-29
Identities = 67/98 (68%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPS-RLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHF 442
LDLASSS+QR S N A PS R V QPE+LIRQLCTF+QQRGG DS SITQHF
Sbjct: 1010 LDLASSSNQR--ESIPENTVASKPSHRYMVVQPEILIRQLCTFIQQRGGQTDSASITQHF 1067
Query: 441 RGRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
+ RIQSKD LFKNLLKEIA L++DA G+RWVLKP+Y+
Sbjct: 1068 KDRIQSKDLPLFKNLLKEIAALEKDAGGSRWVLKPEYQ 1105
>ref|XP_010929630.1| PREDICTED: DNA excision repair protein CSB isoform X1 [Elaeis
guineensis]
Length = 1234
Score = 125 bits (313), Expect = 2e-29
Identities = 67/98 (68%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPS-RLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHF 442
LDLASSS+QR S N A PS R V QPE+LIRQLCTF+QQRGG DS SITQHF
Sbjct: 1139 LDLASSSNQR--ESIPENTVASKPSHRYMVVQPEILIRQLCTFIQQRGGQTDSASITQHF 1196
Query: 441 RGRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
+ RIQSKD LFKNLLKEIA L++DA G+RWVLKP+Y+
Sbjct: 1197 KDRIQSKDLPLFKNLLKEIAALEKDAGGSRWVLKPEYQ 1234
>ref|XP_020679616.1| DNA excision repair protein CSB isoform X2 [Dendrobium catenatum]
Length = 1176
Score = 122 bits (306), Expect = 2e-28
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = -1
Query: 612 LASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFRGR 433
L Q + SR+ Q +RT SRL + QPEV+IRQLCTF+QQ+GG DS +ITQHF+ R
Sbjct: 1082 LEQDLGQASTSSRQNAQTSRTASRLTIVQPEVMIRQLCTFIQQKGGQVDSSNITQHFKDR 1141
Query: 432 IQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
IQSKD LFK+LL+EIA L+RDA+G RWVLKPDY+
Sbjct: 1142 IQSKDLPLFKSLLREIANLERDANGARWVLKPDYQ 1176
>ref|XP_020679614.1| DNA excision repair protein CSB isoform X1 [Dendrobium catenatum]
ref|XP_020679615.1| DNA excision repair protein CSB isoform X1 [Dendrobium catenatum]
Length = 1178
Score = 122 bits (306), Expect = 2e-28
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = -1
Query: 612 LASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFRGR 433
L Q + SR+ Q +RT SRL + QPEV+IRQLCTF+QQ+GG DS +ITQHF+ R
Sbjct: 1084 LEQDLGQASTSSRQNAQTSRTASRLTIVQPEVMIRQLCTFIQQKGGQVDSSNITQHFKDR 1143
Query: 432 IQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
IQSKD LFK+LL+EIA L+RDA+G RWVLKPDY+
Sbjct: 1144 IQSKDLPLFKSLLREIANLERDANGARWVLKPDYQ 1178
>gb|PKU82016.1| putative chromatin-remodeling complex ATPase chain [Dendrobium
catenatum]
Length = 1259
Score = 122 bits (306), Expect = 2e-28
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = -1
Query: 612 LASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFRGR 433
L Q + SR+ Q +RT SRL + QPEV+IRQLCTF+QQ+GG DS +ITQHF+ R
Sbjct: 1165 LEQDLGQASTSSRQNAQTSRTASRLTIVQPEVMIRQLCTFIQQKGGQVDSSNITQHFKDR 1224
Query: 432 IQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
IQSKD LFK+LL+EIA L+RDA+G RWVLKPDY+
Sbjct: 1225 IQSKDLPLFKSLLREIANLERDANGARWVLKPDYQ 1259
>ref|XP_006643635.1| PREDICTED: protein CHROMATIN REMODELING 8 [Oryza brachyantha]
ref|XP_015688092.1| PREDICTED: protein CHROMATIN REMODELING 8 [Oryza brachyantha]
Length = 1176
Score = 120 bits (302), Expect = 6e-28
Identities = 59/92 (64%), Positives = 71/92 (77%)
Frame = -1
Query: 603 SSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFRGRIQS 424
S+S T S E +A+ + +R + QPEVLIRQLCTF+QQ GG A+S SIT+HF+ RI S
Sbjct: 1085 SASNHTSSSSENGRASSSSTRSTIVQPEVLIRQLCTFIQQHGGSANSTSITEHFKNRILS 1144
Query: 423 KDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
KD LLFKNLLKEIATLQR ADG WVLKP+Y+
Sbjct: 1145 KDMLLFKNLLKEIATLQRGADGATWVLKPEYQ 1176
>gb|ONM30829.1| Protein CHROMATIN REMODELING 8 [Zea mays]
Length = 934
Score = 119 bits (299), Expect = 1e-27
Identities = 60/96 (62%), Positives = 73/96 (76%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFR 439
L++ SSS+ + S +A+ P+R + QPEVLIRQLCTF+Q GG A S SIT+HF+
Sbjct: 838 LNVGSSSNLVSSPSGNGGRASNPPNRSMIVQPEVLIRQLCTFIQHNGGSATSTSITEHFK 897
Query: 438 GRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDY 331
RIQSKD LLFKNLLKEIATLQR A+G+ WVLKPDY
Sbjct: 898 SRIQSKDMLLFKNLLKEIATLQRGAEGSVWVLKPDY 933
>gb|ONM30824.1| Protein CHROMATIN REMODELING 8 [Zea mays]
Length = 1008
Score = 119 bits (299), Expect = 1e-27
Identities = 60/96 (62%), Positives = 73/96 (76%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFR 439
L++ SSS+ + S +A+ P+R + QPEVLIRQLCTF+Q GG A S SIT+HF+
Sbjct: 912 LNVGSSSNLVSSPSGNGGRASNPPNRSMIVQPEVLIRQLCTFIQHNGGSATSTSITEHFK 971
Query: 438 GRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDY 331
RIQSKD LLFKNLLKEIATLQR A+G+ WVLKPDY
Sbjct: 972 SRIQSKDMLLFKNLLKEIATLQRGAEGSVWVLKPDY 1007
>gb|ONM30827.1| Protein CHROMATIN REMODELING 8 [Zea mays]
Length = 1045
Score = 119 bits (299), Expect = 1e-27
Identities = 60/96 (62%), Positives = 73/96 (76%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFR 439
L++ SSS+ + S +A+ P+R + QPEVLIRQLCTF+Q GG A S SIT+HF+
Sbjct: 949 LNVGSSSNLVSSPSGNGGRASNPPNRSMIVQPEVLIRQLCTFIQHNGGSATSTSITEHFK 1008
Query: 438 GRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDY 331
RIQSKD LLFKNLLKEIATLQR A+G+ WVLKPDY
Sbjct: 1009 SRIQSKDMLLFKNLLKEIATLQRGAEGSVWVLKPDY 1044
>ref|XP_008673826.1| DNA excision repair protein CSB [Zea mays]
gb|AIB04639.1| SNF2 transcription factor, partial [Zea mays]
gb|ONM30823.1| Protein CHROMATIN REMODELING 8 [Zea mays]
gb|ONM30826.1| Protein CHROMATIN REMODELING 8 [Zea mays]
Length = 1198
Score = 119 bits (299), Expect = 1e-27
Identities = 60/96 (62%), Positives = 73/96 (76%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFR 439
L++ SSS+ + S +A+ P+R + QPEVLIRQLCTF+Q GG A S SIT+HF+
Sbjct: 1102 LNVGSSSNLVSSPSGNGGRASNPPNRSMIVQPEVLIRQLCTFIQHNGGSATSTSITEHFK 1161
Query: 438 GRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDY 331
RIQSKD LLFKNLLKEIATLQR A+G+ WVLKPDY
Sbjct: 1162 SRIQSKDMLLFKNLLKEIATLQRGAEGSVWVLKPDY 1197
>gb|PAN31705.1| hypothetical protein PAHAL_E03606 [Panicum hallii]
Length = 1210
Score = 118 bits (296), Expect = 4e-27
Identities = 60/96 (62%), Positives = 70/96 (72%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFR 439
L+ S S G S +++ + +R + QPEVLIRQLCTF+QQ GG A S SIT+HF+
Sbjct: 1114 LNRGSGSDHIPGPSGNGVRSSNSSNRSMIVQPEVLIRQLCTFIQQNGGSASSTSITEHFK 1173
Query: 438 GRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDY 331
RIQSKD LLFKNLLKEIATLQR ADG WVLKPDY
Sbjct: 1174 SRIQSKDMLLFKNLLKEIATLQRGADGATWVLKPDY 1209
>ref|XP_020192030.1| DNA excision repair protein CSB [Aegilops tauschii subsp. tauschii]
Length = 1221
Score = 117 bits (294), Expect = 7e-27
Identities = 58/96 (60%), Positives = 70/96 (72%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFR 439
L L S+S+QR G + + + SR + QPEVLIRQLCTF+QQ GG A S S+T+HF+
Sbjct: 1125 LSLGSTSNQRPGSTENGRTSNSSSSRNMIVQPEVLIRQLCTFIQQNGGSASSTSLTEHFK 1184
Query: 438 GRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDY 331
RIQ KD L+FKNLLKEIATLQR A G WVLKP+Y
Sbjct: 1185 NRIQPKDMLVFKNLLKEIATLQRGAGGATWVLKPEY 1220
>ref|XP_020106903.1| DNA excision repair protein CSB [Ananas comosus]
ref|XP_020106904.1| DNA excision repair protein CSB [Ananas comosus]
ref|XP_020106905.1| DNA excision repair protein CSB [Ananas comosus]
gb|OAY66993.1| Protein CHROMATIN REMODELING 8 [Ananas comosus]
Length = 1225
Score = 117 bits (293), Expect = 9e-27
Identities = 63/98 (64%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Frame = -1
Query: 618 LDLASSSSQRTGRSREMNQAARTPS-RLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHF 442
LDL S S++R R E N +R + R V QPEVLIRQLCTF+QQRGG DS SITQHF
Sbjct: 1128 LDLGSGSNRRE-RIVERNSRSRVSNGRSVVVQPEVLIRQLCTFLQQRGGSTDSGSITQHF 1186
Query: 441 RGRIQSKDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
+ RI+S+D LFK+LLKEIATLQRDA G+RWVL+P+Y+
Sbjct: 1187 KDRIRSEDLPLFKSLLKEIATLQRDAHGSRWVLRPEYQ 1224
>dbj|BAD45511.1| putative RAD26 [Oryza sativa Japonica Group]
Length = 789
Score = 117 bits (292), Expect = 1e-26
Identities = 58/92 (63%), Positives = 69/92 (75%)
Frame = -1
Query: 603 SSSQRTGRSREMNQAARTPSRLAVAQPEVLIRQLCTFMQQRGGHADSVSITQHFRGRIQS 424
S+S T S +A+ + +R + QPEVLIRQLCTF+QQ GG A S SIT+HF+ RI S
Sbjct: 698 SASNHTSSSSGNGRASSSSTRSMIVQPEVLIRQLCTFIQQHGGSASSTSITEHFKNRILS 757
Query: 423 KDSLLFKNLLKEIATLQRDADGTRWVLKPDYR 328
KD LLFKNLLKEIATLQR A+G WVLKPDY+
Sbjct: 758 KDMLLFKNLLKEIATLQRGANGATWVLKPDYQ 789