BLASTX nr result

ID: Ophiopogon23_contig00005810 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00005810
         (453 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258104.1| protein TIME FOR COFFEE-like [Asparagus offi...    94   2e-19
ref|XP_020259019.1| LOW QUALITY PROTEIN: protein TIME FOR COFFEE...    83   2e-15

>ref|XP_020258104.1| protein TIME FOR COFFEE-like [Asparagus officinalis]
 gb|ONK76420.1| uncharacterized protein A4U43_C03F27630 [Asparagus officinalis]
          Length = 1452

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 66/158 (41%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
 Frame = -3

Query: 445  AGGSHSESKQFGTHQH--QAVKMELTPXXXXXXXXXXXXXXXXXXXXXXXXXFDFSSIVQ 272
            +GGSHSE+KQ G HQ   QA+K+ELTP                          D S+IVQ
Sbjct: 954  SGGSHSENKQAGAHQQHLQAMKVELTPSQAQAYAMSFASFGGSSAGAVPSF--DISAIVQ 1011

Query: 271  NPVLMQNLTEGAKHGYQIPXXXXXXXXXXXXXQHKKGHYEEGKSGGDSXXXXXXXXXXXX 92
            NP L+Q L + AKHG+QIP             QHKKGH E+GKSGGDS            
Sbjct: 1012 NPALIQTLPDLAKHGFQIP----AAAAATTAAQHKKGHNEDGKSGGDS---------GTP 1058

Query: 91   XXXXASGGKNAGSV--------GGQHSLSFSRPDNDPT 2
                 + GKNA S         G QHSLSF+RPD++PT
Sbjct: 1059 IANAVTEGKNATSATVGDGKNGGQQHSLSFARPDSEPT 1096


>ref|XP_020259019.1| LOW QUALITY PROTEIN: protein TIME FOR COFFEE-like [Asparagus
            officinalis]
          Length = 1378

 Score = 82.8 bits (203), Expect = 2e-15
 Identities = 57/150 (38%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
 Frame = -3

Query: 445  AGGSHSESKQFGTHQHQ--AVKMELTPXXXXXXXXXXXXXXXXXXXXXXXXXFDFSSIVQ 272
            +GGSHSE+KQ G HQ Q  A K++LTP                          D S+IVQ
Sbjct: 953  SGGSHSENKQPGAHQQQLQATKVDLTPSQAQAYAMSFASFGGSSAGAVPSF--DISAIVQ 1010

Query: 271  NPVLMQNLTEGAKHGYQIPXXXXXXXXXXXXXQHKKGHYEEGKSGGDSXXXXXXXXXXXX 92
            NP L+Q L + AKHG+Q               QHKKGH E+GK GGD             
Sbjct: 1011 NPALIQTLPDLAKHGFQ---------TAAVTAQHKKGHNEDGKYGGDPGTPIANAVADGK 1061

Query: 91   XXXXASGGKNAGSVGGQHSLSFSRPDNDPT 2
                ++ G      G QHSLSF+RP+N+PT
Sbjct: 1062 NSTASAAGDGKNG-GQQHSLSFARPNNEPT 1090


Top