BLASTX nr result
ID: Ophiopogon23_contig00005681
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00005681
(3667 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018684753.1| PREDICTED: DNA-directed RNA polymerase II su... 2291 0.0
ref|XP_010920288.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2279 0.0
ref|XP_008801262.1| PREDICTED: DNA-directed RNA polymerase II su... 2274 0.0
gb|PKA65122.1| DNA-directed RNA polymerase II subunit RPB2 [Apos... 2274 0.0
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 2267 0.0
ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II su... 2266 0.0
ref|XP_020094305.1| DNA-directed RNA polymerase II subunit RPB2 ... 2265 0.0
ref|XP_020578945.1| DNA-directed RNA polymerase II subunit RPB2 ... 2261 0.0
ref|XP_020677799.1| DNA-directed RNA polymerase II subunit RPB2 ... 2258 0.0
ref|XP_015690688.1| PREDICTED: DNA-directed RNA polymerase II su... 2243 0.0
ref|XP_006650345.2| PREDICTED: DNA-directed RNA polymerase II su... 2243 0.0
ref|XP_006859038.1| DNA-directed RNA polymerase II subunit RPB2 ... 2243 0.0
gb|OVA14931.1| DNA-directed RNA polymerase [Macleaya cordata] 2242 0.0
gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japo... 2241 0.0
ref|XP_015631661.1| PREDICTED: DNA-directed RNA polymerase II su... 2241 0.0
ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II su... 2238 0.0
gb|PAN45941.1| hypothetical protein PAHAL_I02415 [Panicum hallii] 2236 0.0
ref|XP_004982316.1| DNA-directed RNA polymerase II subunit RPB2 ... 2235 0.0
ref|XP_021657771.1| DNA-directed RNA polymerase II subunit RPB2 ... 2231 0.0
ref|XP_002519060.1| PREDICTED: DNA-directed RNA polymerase II su... 2231 0.0
>ref|XP_018684753.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Musa
acuminata subsp. malaccensis]
Length = 1184
Score = 2291 bits (5938), Expect = 0.0
Identities = 1131/1169 (96%), Positives = 1145/1169 (97%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 16 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 75
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD
Sbjct: 76 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 135
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEV ETQ+F KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 136 CEEVAETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 195
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY
Sbjct: 196 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 255
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIII+FRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 256 IRATLPYIRADIPIIIIFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYI+HRLLLC
Sbjct: 316 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 375
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
A+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 376 AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 435
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 436 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 495
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI
Sbjct: 496 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 555
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQ+TKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD
Sbjct: 556 SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 615
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVEKQRLLIKKK IRALQQRE PEEGWHDLV+KGF
Sbjct: 616 YGRCSRPLFIVEKQRLLIKKKDIRALQQRETPEEGWHDLVSKGFIEYIDTEEEETTMISM 675
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 676 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 735
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 736 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 795
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSY+KLDDDGL
Sbjct: 796 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYEKLDDDGL 855
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPIPQDD+QGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 856 APPGTRVSGEDVIIGKTSPIPQDDAQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 915
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR
Sbjct: 916 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 975
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 976 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1035
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1036 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1095
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1096 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1155
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKK 3596
LLFQELMAMAIAPRM+TKE P+KDQKKK
Sbjct: 1156 LLFQELMAMAIAPRMLTKEPNPTKDQKKK 1184
>ref|XP_010920288.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB2 [Elaeis guineensis]
Length = 1187
Score = 2279 bits (5906), Expect = 0.0
Identities = 1124/1171 (95%), Positives = 1146/1171 (97%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPGRQSD
Sbjct: 17 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANIEIRPESQHNPGRQSD 76
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTK++IKKGHD
Sbjct: 77 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKVIKKGHD 136
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTETQEF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 137 CEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 196
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSM E+Q+RPAS+MFVRMLSRTSAKGGSSGQY
Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVRMLSRTSAKGGSSGQY 256
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 257 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYI+HRLLLC
Sbjct: 317 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 376
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 377 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 437 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEW TENFEEI
Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWGTENFEEI 556
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQA+KIFVNG WVGIHRNPDLLV+TLR+LRRQIDVNTEVGV+RDIRLKELRLYTD
Sbjct: 557 SPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 616
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVE QRLLIKKK I+ALQQRE+PEEGWHDLVAKGF
Sbjct: 617 YGRCSRPLFIVENQRLLIKKKDIQALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMIAM 676
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 677 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 737 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 796
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 797 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 856
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTS+RHSESGMVDQVLLTTNADG
Sbjct: 857 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVDQVLLTTNADG 916
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR
Sbjct: 917 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 976
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 977 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1036
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1037 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1096
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1097 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1156
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKKGA 3602
LLFQELMAMAIAPRM TKE+KP+KDQKKKGA
Sbjct: 1157 LLFQELMAMAIAPRMFTKEMKPAKDQKKKGA 1187
>ref|XP_008801262.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Phoenix
dactylifera]
Length = 1187
Score = 2274 bits (5893), Expect = 0.0
Identities = 1120/1171 (95%), Positives = 1145/1171 (97%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPGRQSD
Sbjct: 17 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANIEIRPESQHNPGRQSD 76
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTK++IKKGHD
Sbjct: 77 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKVIKKGHD 136
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTETQEF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 137 CEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 196
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSM E+Q+RPAS+MFVRMLSRTSAKGGSSGQY
Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVRMLSRTSAKGGSSGQY 256
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 257 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYI+HRLLLC
Sbjct: 317 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 376
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 377 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAG RAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 437 KAKTITSGLKYSLATGNWGQANQAGARAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEW TENFEEI
Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWGTENFEEI 556
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQA+KIFVNG WVGIHRNPDLLV+TLR+LRRQIDVNTEVGV+RDIRLKELRLYTD
Sbjct: 557 SPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 616
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVE QRLLIKK+HI+ALQQRE+PEEGWHDLVAKGF
Sbjct: 617 YGRCSRPLFIVENQRLLIKKRHIQALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMIAM 676
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 677 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 737 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 796
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 797 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 856
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTS+RHSESGMVDQVLLTTNADG
Sbjct: 857 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVDQVLLTTNADG 916
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR
Sbjct: 917 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 976
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 977 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1036
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
L+AMIF+GPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1037 LTAMIFIGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1096
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1097 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1156
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKKGA 3602
LLFQELMAMAIAPRM +KEVK +KDQKK+GA
Sbjct: 1157 LLFQELMAMAIAPRMFSKEVKAAKDQKKRGA 1187
>gb|PKA65122.1| DNA-directed RNA polymerase II subunit RPB2 [Apostasia shenzhenica]
Length = 1187
Score = 2274 bits (5892), Expect = 0.0
Identities = 1121/1171 (95%), Positives = 1143/1171 (97%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 17 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 76
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F+ETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTK+IIKKGHD
Sbjct: 77 FLETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKIIKKGHD 136
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTETQEFTKVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 137 CEEVTETQEFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 196
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY
Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 256
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 257 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGEYCETKKAYYFGYI+HRLLLC
Sbjct: 317 VALDYIGKRGATVGVTREKRIKYAKDILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 376
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFR LTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 377 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRNLTRDVRSYVQKCVDNGKDVNLQFAI 436
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWG+ANQAGTR+GVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 437 KAKTITSGLKYSLATGNWGRANQAGTRSGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI
Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 556
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD
Sbjct: 557 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 616
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVEKQRLLIKK+ IRALQQRE PEEGWH+LVAKGF
Sbjct: 617 YGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEGWHELVAKGFIEYIDTEEEETTMISM 676
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDLVNARQNPEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 677 TINDLVNARQNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 737 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 796
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSY+DEEKKMGTLVKE+FG PNRENTMGMRHGSYDKLDDDGL
Sbjct: 797 VIMNQSSIDRGFFRSLFFRSYKDEEKKMGTLVKEEFGCPNRENTMGMRHGSYDKLDDDGL 856
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
PPGTRVSGEDV+IGKTSPI QDD+QG ASRYT RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 857 TPPGTRVSGEDVLIGKTSPISQDDNQGAASRYTHRDHSTSLRHSESGMVDQVLLTTNADG 916
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR
Sbjct: 917 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 976
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 977 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1036
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1037 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1096
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1097 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1156
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKKGA 3602
LLFQELMAMAIAPRM+TKEVKP KDQKKK A
Sbjct: 1157 LLFQELMAMAIAPRMLTKEVKPPKDQKKKAA 1187
>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera]
emb|CAN72948.1| hypothetical protein VITISV_033708 [Vitis vinifera]
emb|CBI21848.3| unnamed protein product, partial [Vitis vinifera]
Length = 1193
Score = 2267 bits (5875), Expect = 0.0
Identities = 1121/1172 (95%), Positives = 1144/1172 (97%), Gaps = 1/1172 (0%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 22 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 81
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F+ETIYKISFGQIYLS+PMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD
Sbjct: 82 FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 141
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
EEVTETQEFTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 142 LEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRP SSMFVRMLSRTSAKGGSSGQY
Sbjct: 202 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIR +IPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 262 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYI+HRLLLC
Sbjct: 322 VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 382 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 441
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 442 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEWSTENFEEI
Sbjct: 502 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 561
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQ+TKIFVNGCWVGIHRNPDLLVKTLRQLRRQ+DVNTEVGVIRDIRLKELRLYTD
Sbjct: 562 SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 621
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEE-GWHDLVAKGFXXXXXXXXXXXXXXX 2066
YGRCSRPLFIVEKQRLLIKK+ IRALQ RE+PE+ GWHDLV+KGF
Sbjct: 622 YGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMIS 681
Query: 2067 XXXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2246
NDL++AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 682 MTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741
Query: 2247 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 2426
MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 742 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801
Query: 2427 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG 2606
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG
Sbjct: 802 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG 861
Query: 2607 LAPPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD 2786
LAPPGTRVSGEDVIIGKT+PI QDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD
Sbjct: 862 LAPPGTRVSGEDVIIGKTTPISQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD 921
Query: 2787 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 2966
GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS
Sbjct: 922 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 981
Query: 2967 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3146
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 982 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1041
Query: 3147 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3326
RL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1042 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1101
Query: 3327 AHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3506
AHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1102 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1161
Query: 3507 KLLFQELMAMAIAPRMITKEVKPSKDQKKKGA 3602
KLLFQELMAMAIAPRM+TKEVKP KDQKKKGA
Sbjct: 1162 KLLFQELMAMAIAPRMLTKEVKPPKDQKKKGA 1193
>ref|XP_010242918.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nelumbo
nucifera]
Length = 1189
Score = 2266 bits (5872), Expect = 0.0
Identities = 1121/1172 (95%), Positives = 1143/1172 (97%), Gaps = 1/1172 (0%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 18 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 77
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F+ETIYKISFGQIYLS+PMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+IKKGHD
Sbjct: 78 FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 137
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTETQEF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 138 CEEVTETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 197
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRP SSMFVRMLSRTSAKGGSSGQY
Sbjct: 198 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 257
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIR +IPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 258 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 317
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYI+HRLLLC
Sbjct: 318 VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 377
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 378 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 437
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 438 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 497
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEWSTENFEEI
Sbjct: 498 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 557
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQATKIFVNGCWVGIHRNP+LLVKTLRQLRRQ+DVNTEVGVIRDIRLKELRLYTD
Sbjct: 558 SPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 617
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEE-GWHDLVAKGFXXXXXXXXXXXXXXX 2066
YGRCSRPLFIVEKQRLLIKKK IRALQQRE+ EE GWHDLVAKGF
Sbjct: 618 YGRCSRPLFIVEKQRLLIKKKDIRALQQRESSEEGGWHDLVAKGFIEYVDTEEEETTMIS 677
Query: 2067 XXXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2246
NDLV AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 678 MTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 737
Query: 2247 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 2426
MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 738 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 797
Query: 2427 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG 2606
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+RENTMGMRHGSYDKLDDDG
Sbjct: 798 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPSRENTMGMRHGSYDKLDDDG 857
Query: 2607 LAPPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD 2786
LAPPGTRVSGEDVIIGKT+PI QDDSQGQ+SRYTRRDHSTSLRHSESGMVDQVLLTTNAD
Sbjct: 858 LAPPGTRVSGEDVIIGKTTPIAQDDSQGQSSRYTRRDHSTSLRHSESGMVDQVLLTTNAD 917
Query: 2787 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 2966
GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS
Sbjct: 918 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 977
Query: 2967 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3146
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 978 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1037
Query: 3147 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3326
+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1038 KLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1097
Query: 3327 AHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3506
AHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1098 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1157
Query: 3507 KLLFQELMAMAIAPRMITKEVKPSKDQKKKGA 3602
KLLFQELM+MAIAPRM+TKEVKPSKDQKKKGA
Sbjct: 1158 KLLFQELMSMAIAPRMLTKEVKPSKDQKKKGA 1189
>ref|XP_020094305.1| DNA-directed RNA polymerase II subunit RPB2 [Ananas comosus]
gb|OAY64594.1| DNA-directed RNA polymerase II subunit RPB2 [Ananas comosus]
Length = 1187
Score = 2265 bits (5869), Expect = 0.0
Identities = 1116/1169 (95%), Positives = 1139/1169 (97%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQS+
Sbjct: 19 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSE 78
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F ET++KISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVT R++KKGHD
Sbjct: 79 FSETLHKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTYRVVKKGHD 138
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTETQE+ KVFIGKVPIMLRSSYCTLYQ SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 139 CEEVTETQEYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVL 198
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY
Sbjct: 199 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 258
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 259 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 318
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYI+HRLLLC
Sbjct: 319 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 378
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
A+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK+VNLQFAI
Sbjct: 379 AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 438
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKT+TSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 439 KAKTVTSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 498
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 499 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 558
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQA KIFVNGCWVGIHRNPDLLV+TLR+LRRQIDVNTEVGV+RDIRLKELRLYTD
Sbjct: 559 SPAVIPQAAKIFVNGCWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 618
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVE QRLLIKKK IRALQQRE+PEEGWHDLVAKGF
Sbjct: 619 YGRCSRPLFIVENQRLLIKKKDIRALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMISM 678
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDLVNARQNP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 679 TINDLVNARQNPDEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 738
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 739 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 798
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 799 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 858
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPI QDDSQGQASRYTRRDHST LRHSESGMVDQVLLTTNADG
Sbjct: 859 APPGTRVSGEDVIIGKTSPISQDDSQGQASRYTRRDHSTCLRHSESGMVDQVLLTTNADG 918
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 919 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 978
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 979 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1038
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1039 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1098
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAA FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1099 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1158
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKK 3596
LLFQELMAMAIAPRM+TKE KPSKDQKKK
Sbjct: 1159 LLFQELMAMAIAPRMLTKEEKPSKDQKKK 1187
>ref|XP_020578945.1| DNA-directed RNA polymerase II subunit RPB2 [Phalaenopsis equestris]
Length = 1187
Score = 2261 bits (5858), Expect = 0.0
Identities = 1115/1168 (95%), Positives = 1139/1168 (97%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFE+KGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 17 ITQEDAWAVISAYFEDKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 76
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTK+IIKKGHD
Sbjct: 77 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKIIKKGHD 136
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTETQEFTKVFIGKVP+MLRS+YCTL+QNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 137 CEEVTETQEFTKVFIGKVPVMLRSTYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 196
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAE+QNRPASSMFVRMLSRTSAKGG+SGQY
Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASSMFVRMLSRTSAKGGNSGQY 256
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 257 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVG+GEYCETKKAYYFGYI+HRLLLC
Sbjct: 317 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLC 376
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 377 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 437 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI
Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 556
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD
Sbjct: 557 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 616
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVEKQRLLIKKK I ALQQRE PEEGWHDLVAKGF
Sbjct: 617 YGRCSRPLFIVEKQRLLIKKKDIIALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 676
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDLVN RQNPE AY+ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 677 TINDLVNGRQNPEGAYAETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 737 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAITCYSGYNQEDS 796
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 797 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 856
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPI QD++QG ASRYT+RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 857 APPGTRVSGEDVIIGKTSPIAQDEAQGAASRYTQRDHSTSLRHSESGMVDQVLLTTNADG 916
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR
Sbjct: 917 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 976
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 977 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1036
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1037 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1096
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1097 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1156
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKK 3593
LLFQELM+MAIAPRM+TKE K + ++K
Sbjct: 1157 LLFQELMSMAIAPRMLTKEEKVPRKRRK 1184
>ref|XP_020677799.1| DNA-directed RNA polymerase II subunit RPB2 [Dendrobium catenatum]
gb|PKU84997.1| DNA-directed RNA polymerase II subunit RPB2 [Dendrobium catenatum]
Length = 1186
Score = 2258 bits (5850), Expect = 0.0
Identities = 1118/1170 (95%), Positives = 1139/1170 (97%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 17 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 76
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTK+IIKKGHD
Sbjct: 77 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKIIKKGHD 136
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTETQEFTKVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 137 CEEVTETQEFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 196
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAE+QNRPASSMFVRMLSRTSAKGGSSGQY
Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASSMFVRMLSRTSAKGGSSGQY 256
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSD+QMMELLRPSLEEAFVIQNQQ
Sbjct: 257 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDSQMMELLRPSLEEAFVIQNQQ 316
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYI+HRLLLC
Sbjct: 317 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 376
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 377 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 437 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEW TENFEEI
Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWGTENFEEI 556
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLR+LRRQIDVNTEVGVIRDIRLKELRLYTD
Sbjct: 557 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRKLRRQIDVNTEVGVIRDIRLKELRLYTD 616
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVEKQRLLIKKK I +LQQRE PEEGWHDLVAKGF
Sbjct: 617 YGRCSRPLFIVEKQRLLIKKKDIISLQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 676
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDLVN RQNPE+AY+ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 677 TINDLVNGRQNPEDAYAETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 737 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAITCYSGYNQEDS 796
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 797 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 856
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPI QD++QG ASRYT+RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 857 APPGTRVSGEDVIIGKTSPIAQDEAQGAASRYTQRDHSTSLRHSESGMVDQVLLTTNADG 916
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR
Sbjct: 917 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 976
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 977 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1036
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1037 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1096
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKKNS ECRGCKNKTDIVQVHIPYACK
Sbjct: 1097 HGAAHFLKERLFDQSDAYRVHVCEICGLIAIANLKKNSVECRGCKNKTDIVQVHIPYACK 1156
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKKG 3599
LLFQELM+MAIAPRM+TKE K S +KKKG
Sbjct: 1157 LLFQELMSMAIAPRMLTKEDK-SNQKKKKG 1185
>ref|XP_015690688.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
[Oryza brachyantha]
ref|XP_015690689.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X3
[Oryza brachyantha]
Length = 1219
Score = 2243 bits (5813), Expect = 0.0
Identities = 1102/1169 (94%), Positives = 1133/1169 (96%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 51 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 110
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F ET++KISFGQIYLS+PMMTE+DGETATLFPK+ARLRNLTYSAPLYVDV+ R++KKGHD
Sbjct: 111 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 170
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTET E+ KVFIGKVPIMLRSSYCTL+Q SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 171 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 230
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSR AKGGSSGQY
Sbjct: 231 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 290
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 291 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 350
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYI+HRLL+C
Sbjct: 351 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 410
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK+VNLQFAI
Sbjct: 411 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 470
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 471 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 530
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 531 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 590
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQIDVNTEVGV+RDIRLKELRLYTD
Sbjct: 591 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 650
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVE QRLLIKKKHIRALQQRE PEEGWHDLVAKGF
Sbjct: 651 YGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 710
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDLVNAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 711 TINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 770
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 771 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 830
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 831 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 890
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPIPQDD+QGQA+RYT+RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 891 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 950
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 951 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 1010
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 1011 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1070
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1071 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1130
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAA FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1131 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1190
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKK 3596
LLFQELMAMAIAPRM+T + K KDQK++
Sbjct: 1191 LLFQELMAMAIAPRMLTNDNKTGKDQKRR 1219
>ref|XP_006650345.2| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Oryza brachyantha]
Length = 1254
Score = 2243 bits (5813), Expect = 0.0
Identities = 1102/1169 (94%), Positives = 1133/1169 (96%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 86 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 145
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F ET++KISFGQIYLS+PMMTE+DGETATLFPK+ARLRNLTYSAPLYVDV+ R++KKGHD
Sbjct: 146 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 205
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTET E+ KVFIGKVPIMLRSSYCTL+Q SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 206 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 265
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSR AKGGSSGQY
Sbjct: 266 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 325
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 326 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 385
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYI+HRLL+C
Sbjct: 386 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 445
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK+VNLQFAI
Sbjct: 446 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 505
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 506 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 565
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 566 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 625
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQIDVNTEVGV+RDIRLKELRLYTD
Sbjct: 626 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 685
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVE QRLLIKKKHIRALQQRE PEEGWHDLVAKGF
Sbjct: 686 YGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 745
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDLVNAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 746 TINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 805
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 806 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 865
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 866 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 925
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPIPQDD+QGQA+RYT+RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 926 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 985
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 986 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 1045
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 1046 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1105
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1106 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1165
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAA FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1166 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1225
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKK 3596
LLFQELMAMAIAPRM+T + K KDQK++
Sbjct: 1226 LLFQELMAMAIAPRMLTNDNKTGKDQKRR 1254
>ref|XP_006859038.1| DNA-directed RNA polymerase II subunit RPB2 isoform X1 [Amborella
trichopoda]
gb|ERN20505.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda]
Length = 1190
Score = 2243 bits (5812), Expect = 0.0
Identities = 1107/1171 (94%), Positives = 1135/1171 (96%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ+D
Sbjct: 16 ITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAD 75
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
FVETIYKISFGQIYLS+PMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+IKKGHD
Sbjct: 76 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 135
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
EE+ E QE TKVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 136 HEELAEQQELTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 195
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QN+P SSMFVRMLSRTS+KGGSSGQY
Sbjct: 196 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNKPPSSMFVRMLSRTSSKGGSSGQY 255
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRA+IPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 256 IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRG+TVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYI+HRLL+C
Sbjct: 316 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLVC 375
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRRPEDDRDHYGNKRLDLAGPLLG LFR +FRKLTRDVRSYVQKCVDNGK+VNLQFAI
Sbjct: 376 ALGRRPEDDRDHYGNKRLDLAGPLLGSLFRTMFRKLTRDVRSYVQKCVDNGKEVNLQFAI 435
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 495
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEWSTENFEEI
Sbjct: 496 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 555
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQATKIFVNGCWVGIHRNP+LLVKTLRQLRRQ+DVNTEVGVIRDIRLKELRLYTD
Sbjct: 556 SPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 615
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVEKQRLLIKK IRALQQRE+P+EGWHDLVAKGF
Sbjct: 616 YGRCSRPLFIVEKQRLLIKKSDIRALQQRESPDEGWHDLVAKGFIEYVDTEEEETTMISM 675
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
+DLV+AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 676 TISDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 735
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS
Sbjct: 736 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 795
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 796 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 855
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKT+PI Q++ QGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 856 APPGTRVSGEDVIIGKTTPITQEEMQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 915
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR
Sbjct: 916 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 975
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR
Sbjct: 976 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 1035
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1036 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1095
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI+QVHIPYACK
Sbjct: 1096 HGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNKTDIIQVHIPYACK 1155
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKKGA 3602
LLFQELMAMAIAPRM TKE K KD KKKGA
Sbjct: 1156 LLFQELMAMAIAPRMFTKEEKKPKDHKKKGA 1186
>gb|OVA14931.1| DNA-directed RNA polymerase [Macleaya cordata]
Length = 1188
Score = 2242 bits (5809), Expect = 0.0
Identities = 1106/1171 (94%), Positives = 1135/1171 (96%), Gaps = 1/1171 (0%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 17 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 76
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F+ETIYKISFGQIYLS+PMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD
Sbjct: 77 FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 136
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 137 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 196
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRP SSMFVRMLSR +AKGGSSGQY
Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRANAKGGSSGQY 256
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIR +IPIIIVFRALGFVADKDILEHICYDF+DT+MMELLRPSLEEAFVIQNQQ
Sbjct: 257 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTRMMELLRPSLEEAFVIQNQQ 316
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYI+HRLLLC
Sbjct: 317 VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 376
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
LGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 377 VLGRRSEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 436
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQAN GTRAGVSQVLN L YASTLSHLRRLNSPIGREGKLA
Sbjct: 437 KAKTITSGLKYSLATGNWGQANATGTRAGVSQVLNHLKYASTLSHLRRLNSPIGREGKLA 496
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEWSTENFEEI
Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 556
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQATKIFVNGCWVGIHRNP+LLVKTL+QLRRQ+DVNTEVGVIRDI LKELRLYTD
Sbjct: 557 SPAVIPQATKIFVNGCWVGIHRNPELLVKTLKQLRRQVDVNTEVGVIRDICLKELRLYTD 616
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEE-GWHDLVAKGFXXXXXXXXXXXXXXX 2066
YGRCSRPLFIVE QRLLI+K+ IRALQ RE+P+E GWHDLVAKG+
Sbjct: 617 YGRCSRPLFIVENQRLLIRKRDIRALQLRESPDEGGWHDLVAKGYIEYVDTEEEETTMIS 676
Query: 2067 XXXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2246
NDLV+AR NPEEAYS TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 677 MTINDLVSARLNPEEAYSGTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 736
Query: 2247 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 2426
MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 737 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 796
Query: 2427 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG 2606
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSYDKLDDDG
Sbjct: 797 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSYDKLDDDG 856
Query: 2607 LAPPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD 2786
LAPPGTRVSGEDVIIGKT+PI QDD+QGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD
Sbjct: 857 LAPPGTRVSGEDVIIGKTTPIAQDDTQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD 916
Query: 2787 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 2966
GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS
Sbjct: 917 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 976
Query: 2967 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3146
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 977 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1036
Query: 3147 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3326
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1037 KLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1096
Query: 3327 AHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3506
AHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1097 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1156
Query: 3507 KLLFQELMAMAIAPRMITKEVKPSKDQKKKG 3599
KLLFQELMAMAIAPRM+TKEVKPSKDQK+KG
Sbjct: 1157 KLLFQELMAMAIAPRMLTKEVKPSKDQKRKG 1187
>gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
Length = 1218
Score = 2241 bits (5807), Expect = 0.0
Identities = 1100/1169 (94%), Positives = 1133/1169 (96%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 50 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 109
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F ET++KISFGQIYLS+PMMTE+DGETATLFPK+ARLRNLTYSAPLYVDV+ R++KKGHD
Sbjct: 110 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 169
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTET E+ KVFIGKVPIMLRSSYCTL+Q SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 170 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 229
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSR AKGGSSGQY
Sbjct: 230 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 289
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 290 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 349
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYI+HRLL+C
Sbjct: 350 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 409
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK+VNLQFAI
Sbjct: 410 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 469
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 470 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 529
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 589
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQIDVNTEVGV+RDIRLKELRLYTD
Sbjct: 590 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 649
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVE QRLLIKK+HIRALQQRE PEEGWHDLVAKGF
Sbjct: 650 YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 709
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDL+ AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 710 TINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 769
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 770 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 829
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 830 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 889
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPIPQDD+QGQA+RYT+RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 890 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 949
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 950 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 1009
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 1010 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1069
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1070 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1129
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAA FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1130 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1189
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKK 3596
LLFQELMAMAIAPRM+T++ K KDQKK+
Sbjct: 1190 LLFQELMAMAIAPRMLTQDNKTGKDQKKR 1218
>ref|XP_015631661.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Oryza sativa
Japonica Group]
gb|ABF97884.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative,
expressed [Oryza sativa Japonica Group]
gb|EAY91202.1| hypothetical protein OsI_12811 [Oryza sativa Indica Group]
Length = 1222
Score = 2241 bits (5807), Expect = 0.0
Identities = 1100/1169 (94%), Positives = 1133/1169 (96%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 54 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 113
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F ET++KISFGQIYLS+PMMTE+DGETATLFPK+ARLRNLTYSAPLYVDV+ R++KKGHD
Sbjct: 114 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 173
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTET E+ KVFIGKVPIMLRSSYCTL+Q SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 174 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 233
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSR AKGGSSGQY
Sbjct: 234 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 293
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 294 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 353
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYI+HRLL+C
Sbjct: 354 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 413
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK+VNLQFAI
Sbjct: 414 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 473
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 474 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 533
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 534 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 593
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQIDVNTEVGV+RDIRLKELRLYTD
Sbjct: 594 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 653
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVE QRLLIKK+HIRALQQRE PEEGWHDLVAKGF
Sbjct: 654 YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 713
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDL+ AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 714 TINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 773
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 774 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 833
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 834 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 893
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPIPQDD+QGQA+RYT+RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 894 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 953
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 954 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 1013
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 1014 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1073
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1074 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1133
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAA FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1134 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1193
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKK 3596
LLFQELMAMAIAPRM+T++ K KDQKK+
Sbjct: 1194 LLFQELMAMAIAPRMLTQDNKTGKDQKKR 1222
>ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Brachypodium
distachyon]
gb|KQK13978.1| hypothetical protein BRADI_1g13720v3 [Brachypodium distachyon]
Length = 1228
Score = 2238 bits (5799), Expect = 0.0
Identities = 1096/1169 (93%), Positives = 1134/1169 (97%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 60 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 119
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F ET++KISFGQIYLS+PMMTE+DGETATLFPK+ARLRNLTYSAPLYVDV+ R++KKGHD
Sbjct: 120 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVVKKGHD 179
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTET E+ KVFIGKVPIMLRSSYCTL+Q SEKDLTELGECPYDQGGYF+INGSEKVL
Sbjct: 180 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVL 239
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAENQNRPASSMFVRMLSR AKGGSSGQY
Sbjct: 240 IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 299
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 300 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 359
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYI+HRLL+C
Sbjct: 360 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 419
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 420 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 479
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 480 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 539
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 540 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 599
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQIDVNTEVGV+RDIRLKELRLYTD
Sbjct: 600 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 659
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIV+ QRLLIKKKHIRALQQRE P+EGWHDLVAKGF
Sbjct: 660 YGRCSRPLFIVDGQRLLIKKKHIRALQQRETPDEGWHDLVAKGFIEYIDTEEEETTMISM 719
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDLV+AR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 720 TINDLVSARNNPQEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 779
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 780 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 839
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 840 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 899
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPIPQDD+QGQA+RY++RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 900 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYSKRDHSTSLRHSESGMVDQVLLTTNADG 959
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 960 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 1019
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 1020 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1079
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1080 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1139
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAA FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1140 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1199
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKK 3596
LLFQELMAMAIAPRM+T ++K KDQKK+
Sbjct: 1200 LLFQELMAMAIAPRMLTHDIKSGKDQKKR 1228
>gb|PAN45941.1| hypothetical protein PAHAL_I02415 [Panicum hallii]
Length = 1230
Score = 2236 bits (5795), Expect = 0.0
Identities = 1096/1169 (93%), Positives = 1133/1169 (96%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 62 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 121
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F ET++KISFGQIYLS+PMMTE+DGETATLFPK+ARLRNLTYSAPLYVDV+ R++KKGHD
Sbjct: 122 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 181
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTET ++ KVFIGKVPIMLRSSYCTLYQ SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 182 CEEVTETSDYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVL 241
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSR AKGGSSGQY
Sbjct: 242 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 301
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 302 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 361
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYI+HRLL+C
Sbjct: 362 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 421
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK+VNLQFAI
Sbjct: 422 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 481
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 482 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 541
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 542 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 601
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQA KIFVNGCWVGIHRN DLLVKTLR+LRRQIDVNTEVGV+RDIRLKELRLYTD
Sbjct: 602 SPAVIPQAAKIFVNGCWVGIHRNADLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 661
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVE QRLLIKK HIRALQQRE P+EGWH+LV+KG+
Sbjct: 662 YGRCSRPLFIVENQRLLIKKAHIRALQQRETPDEGWHELVSKGYIEYIDTEEEETTMISM 721
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDL+NARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 722 TINDLINARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 781
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 782 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 841
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 842 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 901
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPIPQDD+QGQASRY++RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 902 APPGTRVSGEDVIIGKTSPIPQDDAQGQASRYSKRDHSTSLRHSESGMVDQVLLTTNADG 961
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 962 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 1021
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 1022 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1081
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1082 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1141
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAA FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1142 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1201
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKK 3596
LLFQELMAMAIAPRM+T ++K KDQKK+
Sbjct: 1202 LLFQELMAMAIAPRMLTHDIKTGKDQKKR 1230
>ref|XP_004982316.1| DNA-directed RNA polymerase II subunit RPB2 [Setaria italica]
gb|KQK87931.1| hypothetical protein SETIT_033950mg [Setaria italica]
Length = 1226
Score = 2235 bits (5792), Expect = 0.0
Identities = 1095/1169 (93%), Positives = 1133/1169 (96%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 58 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 117
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F ET++KISFGQIYLS+PMMTE+DGETATLFPK+ARLRNLTYSAPLYVDV+ R++KKGHD
Sbjct: 118 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 177
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
CEEVTET ++ KVFIGKVPIMLRSSYCTLYQ SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 178 CEEVTETSDYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVL 237
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNK++YVAEVRSMAENQNRPASSMFVRMLSR AKGGSSGQY
Sbjct: 238 IAQEKMSTNHVYVFKKRQPNKFSYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 297
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 298 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 357
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYI+HRLL+C
Sbjct: 358 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 417
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK+VNLQFAI
Sbjct: 418 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 477
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 478 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 537
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 538 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 597
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQIDVNTEVGV+RDIRLKELRLYTD
Sbjct: 598 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 657
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEEGWHDLVAKGFXXXXXXXXXXXXXXXX 2069
YGRCSRPLFIVE QRLLIKK HIRALQQRE P+EGWH+LV+KG+
Sbjct: 658 YGRCSRPLFIVENQRLLIKKAHIRALQQRETPDEGWHELVSKGYIEYIDTEEEETTMISM 717
Query: 2070 XXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2249
NDL+NAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 718 TINDLINARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 777
Query: 2250 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2429
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS
Sbjct: 778 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 837
Query: 2430 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 2609
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLDDDGL
Sbjct: 838 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 897
Query: 2610 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 2789
APPGTRVSGEDVIIGKTSPIPQDD+QGQASRY++RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 898 APPGTRVSGEDVIIGKTSPIPQDDAQGQASRYSKRDHSTSLRHSESGMVDQVLLTTNADG 957
Query: 2790 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 2969
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 958 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 1017
Query: 2970 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3149
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 1018 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1077
Query: 3150 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3329
L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1078 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1137
Query: 3330 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3509
HGAA FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1138 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1197
Query: 3510 LLFQELMAMAIAPRMITKEVKPSKDQKKK 3596
LLFQELMAMAIAPRM+T ++K KDQKK+
Sbjct: 1198 LLFQELMAMAIAPRMLTHDMKTGKDQKKR 1226
>ref|XP_021657771.1| DNA-directed RNA polymerase II subunit RPB2 [Hevea brasiliensis]
Length = 1192
Score = 2231 bits (5782), Expect = 0.0
Identities = 1100/1172 (93%), Positives = 1135/1172 (96%), Gaps = 1/1172 (0%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 21 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F ETIYKISFGQIYLS+PMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+IKKGHD
Sbjct: 81 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 141 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRP S+MFVRMLSRTSAKGGSSGQY
Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 260
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIR +IPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 261 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYI+HRLLLC
Sbjct: 321 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 380
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 381 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 440
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 441 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQATKIFVNGCWVGIHRNPD+LVKTLR+LRR++DVNTEVGV+RDIRLKELR+YTD
Sbjct: 561 SPAVIPQATKIFVNGCWVGIHRNPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEE-GWHDLVAKGFXXXXXXXXXXXXXXX 2066
YGRCSRPLFIVEKQRLLIKKK I ALQQRE+ EE GWHDLVAKGF
Sbjct: 621 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 680
Query: 2067 XXXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2246
+DLV AR NPEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 681 MTIHDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740
Query: 2247 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 2426
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800
Query: 2427 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG 2606
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R NTMGMRHGSYDKLDDDG
Sbjct: 801 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 860
Query: 2607 LAPPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD 2786
LAPPGTRVSGEDVIIGKT+PI QD++QGQ++RYTRRDHS SLRHSE+G+VDQVLLTTNAD
Sbjct: 861 LAPPGTRVSGEDVIIGKTTPISQDEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 920
Query: 2787 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 2966
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS
Sbjct: 921 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 980
Query: 2967 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3146
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 981 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1040
Query: 3147 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3326
RL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1041 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1100
Query: 3327 AHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3506
AHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1101 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1160
Query: 3507 KLLFQELMAMAIAPRMITKEVKPSKDQKKKGA 3602
KLLFQELMAMAIAPRM+TK+VKPSKD+KKKGA
Sbjct: 1161 KLLFQELMAMAIAPRMLTKDVKPSKDKKKKGA 1192
>ref|XP_002519060.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ricinus
communis]
gb|EEF43271.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
Length = 1194
Score = 2231 bits (5782), Expect = 0.0
Identities = 1101/1172 (93%), Positives = 1135/1172 (96%), Gaps = 1/1172 (0%)
Frame = +3
Query: 90 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 269
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 270 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 449
F ETIYKISFGQIYLS+PMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+IKKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 450 CEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 629
EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 630 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 809
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRP S+MFVRMLSRTSAKGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 810 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 989
IRATLPYIR +IPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 990 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIVHRLLLC 1169
VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYI+HRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 1170 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1349
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442
Query: 1350 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1529
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 1530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 1709
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 1710 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 1889
SPAVIPQATKIFVNGCWVGIHR+PD+LVKTLR+LRR++DVNTEVGV+RDIRLKELR+YTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1890 YGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEE-GWHDLVAKGFXXXXXXXXXXXXXXX 2066
YGRCSRPLFIVEKQRLLIKKK I ALQQRE+ EE GWHDLVAKGF
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 2067 XXXNDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2246
+DLV AR NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 2247 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 2426
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 2427 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG 2606
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 2607 LAPPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD 2786
LAPPGTRVSGEDVIIGKT+PI Q+++QGQ++RYTRRDHS SLRHSE+G+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 2787 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 2966
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 2967 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3146
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 3147 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3326
RL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 3327 AHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3506
AHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1162
Query: 3507 KLLFQELMAMAIAPRMITKEVKPSKDQKKKGA 3602
KLLFQELMAMAIAPRM+TK+VKP+KDQKKKGA
Sbjct: 1163 KLLFQELMAMAIAPRMLTKDVKPTKDQKKKGA 1194