BLASTX nr result
ID: Ophiopogon23_contig00003459
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00003459
(429 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P46302.1|RS28_MAIZE RecName: Full=40S ribosomal protein S28 >... 80 2e-17
ref|XP_010241388.1| PREDICTED: 40S ribosomal protein S28 [Nelumb... 80 2e-17
ref|XP_008789172.1| PREDICTED: 40S ribosomal protein S28 [Phoeni... 80 2e-17
gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays] 80 2e-17
ref|XP_010233649.1| PREDICTED: 40S ribosomal protein S28 [Brachy... 80 2e-17
ref|NP_001147283.1| 40S ribosomal protein S28 [Zea mays] >gi|226... 80 2e-17
gb|ONL94056.1| 40S ribosomal protein S28 [Zea mays] 80 2e-17
dbj|BAT10815.1| Os10g0411700, partial [Oryza sativa Japonica Group] 80 3e-17
gb|OAY82565.1| 40S ribosomal protein S28, partial [Ananas comosus] 80 3e-17
gb|OAY82556.1| 40S ribosomal protein S28, partial [Ananas comosus] 80 3e-17
gb|OUZ99539.1| Ribosomal protein S28e [Macleaya cordata] >gi|120... 80 3e-17
gb|KMZ73331.1| 40S ribosomal protein S28 [Zostera marina] 80 3e-17
gb|OAY80870.1| 40S ribosomal protein S28, partial [Ananas comosus] 80 3e-17
ref|XP_019052660.1| PREDICTED: 40S ribosomal protein S28-like [N... 80 4e-17
emb|CDM87113.1| unnamed protein product [Triticum aestivum] 80 4e-17
gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticu... 80 4e-17
gb|KMZ71242.1| 40S ribosomal protein S28 [Zostera marina] 80 5e-17
ref|XP_011627494.1| 40S ribosomal protein S28 [Amborella trichop... 80 5e-17
gb|EEE58387.1| hypothetical protein OsJ_09549 [Oryza sativa Japo... 80 5e-17
gb|OQU92746.1| hypothetical protein SORBI_3001G402050, partial [... 80 6e-17
>sp|P46302.1|RS28_MAIZE RecName: Full=40S ribosomal protein S28
emb|CAA57636.1| small subunit ribosomal protein S28 [Zea mays]
Length = 65
Score = 80.5 bits (197), Expect = 2e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 4 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 44
>ref|XP_010241388.1| PREDICTED: 40S ribosomal protein S28 [Nelumbo nucifera]
ref|XP_010241389.1| PREDICTED: 40S ribosomal protein S28 [Nelumbo nucifera]
ref|XP_010241390.1| PREDICTED: 40S ribosomal protein S28 [Nelumbo nucifera]
ref|XP_010241391.1| PREDICTED: 40S ribosomal protein S28 [Nelumbo nucifera]
ref|XP_020092731.1| 40S ribosomal protein S28-like [Ananas comosus]
ref|XP_020092732.1| 40S ribosomal protein S28-like [Ananas comosus]
gb|OAY64190.1| 40S ribosomal protein S28 [Ananas comosus]
gb|OAY66730.1| 40S ribosomal protein S28 [Ananas comosus]
Length = 65
Score = 80.5 bits (197), Expect = 2e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 4 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 44
>ref|XP_008789172.1| PREDICTED: 40S ribosomal protein S28 [Phoenix dactylifera]
ref|XP_008804325.1| PREDICTED: 40S ribosomal protein S28 [Phoenix dactylifera]
ref|XP_019703417.1| PREDICTED: 40S ribosomal protein S28 [Elaeis guineensis]
ref|XP_019706631.1| PREDICTED: 40S ribosomal protein S28 [Elaeis guineensis]
Length = 65
Score = 80.5 bits (197), Expect = 2e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 4 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 44
>gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays]
Length = 65
Score = 80.5 bits (197), Expect = 2e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 4 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 44
>ref|XP_010233649.1| PREDICTED: 40S ribosomal protein S28 [Brachypodium distachyon]
ref|XP_010237562.1| PREDICTED: 40S ribosomal protein S28 [Brachypodium distachyon]
ref|XP_010237563.1| PREDICTED: 40S ribosomal protein S28 [Brachypodium distachyon]
ref|XP_014755691.1| PREDICTED: 40S ribosomal protein S28 [Brachypodium distachyon]
gb|KQJ87847.1| hypothetical protein BRADI_4g13890v3 [Brachypodium distachyon]
gb|KQJ87849.1| hypothetical protein BRADI_4g13910v3 [Brachypodium distachyon]
gb|KQJ92758.1| hypothetical protein BRADI_3g00500v3 [Brachypodium distachyon]
gb|KQJ92759.1| hypothetical protein BRADI_3g00500v3 [Brachypodium distachyon]
Length = 65
Score = 80.5 bits (197), Expect = 2e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 4 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 44
>ref|NP_001147283.1| 40S ribosomal protein S28 [Zea mays]
ref|NP_001147474.1| 40S ribosomal protein S28 [Zea mays]
ref|NP_001147106.1| 40S ribosomal protein S28 [Zea mays]
ref|XP_002468448.1| 40S ribosomal protein S28 [Sorghum bicolor]
ref|XP_015632495.1| PREDICTED: 40S ribosomal protein S28 [Oryza sativa Japonica Group]
ref|XP_015614739.1| PREDICTED: 40S ribosomal protein S28 [Oryza sativa Japonica Group]
ref|XP_020099598.1| 40S ribosomal protein S28 [Ananas comosus]
ref|XP_020099599.1| 40S ribosomal protein S28 [Ananas comosus]
ref|XP_020181149.1| 40S ribosomal protein S28 [Aegilops tauschii subsp. tauschii]
ref|XP_020181150.1| 40S ribosomal protein S28 [Aegilops tauschii subsp. tauschii]
ref|XP_020175820.1| 40S ribosomal protein S28 [Aegilops tauschii subsp. tauschii]
ref|XP_021306979.1| 40S ribosomal protein S28 [Sorghum bicolor]
ref|XP_021306980.1| 40S ribosomal protein S28 [Sorghum bicolor]
pdb|3J60|CC Chain c, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome
dbj|BAF26498.1| Os10g0411700 [Oryza sativa Japonica Group]
gb|ACF86311.1| unknown [Zea mays]
gb|ACG24343.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG24347.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG25459.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG26566.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG26738.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG26863.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG27650.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG30883.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG30999.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG31175.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG31661.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG31904.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG47269.1| 40S ribosomal protein S28 [Zea mays]
gb|ACG47462.1| 40S ribosomal protein S28 [Zea mays]
gb|EEE50948.1| hypothetical protein OsJ_31495 [Oryza sativa Japonica Group]
dbj|BAF10993.2| Os03g0167100 [Oryza sativa Japonica Group]
dbj|BAJ87180.1| predicted protein [Hordeum vulgare subsp. vulgare]
dbj|BAJ93212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gb|EMS64988.1| 40S ribosomal protein S28 [Triticum urartu]
gb|KQK89165.1| hypothetical protein SETIT_038573mg [Setaria italica]
gb|OEL20194.1| 40S ribosomal protein S28 [Dichanthelium oligosanthes]
gb|ONL97069.1| 40S ribosomal protein S28 [Zea mays]
gb|AQL07313.1| 40S ribosomal protein S28 [Zea mays]
gb|AQL07314.1| 40S ribosomal protein S28 [Zea mays]
gb|PAN47374.1| hypothetical protein PAHAL_B03374 [Panicum hallii]
gb|PAN51410.1| hypothetical protein PAHAL_I00548 [Panicum hallii]
Length = 65
Score = 80.5 bits (197), Expect = 2e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 4 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 44
>gb|ONL94056.1| 40S ribosomal protein S28 [Zea mays]
Length = 68
Score = 80.5 bits (197), Expect = 2e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 7 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 47
>dbj|BAT10815.1| Os10g0411700, partial [Oryza sativa Japonica Group]
Length = 71
Score = 80.5 bits (197), Expect = 3e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 10 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 50
>gb|OAY82565.1| 40S ribosomal protein S28, partial [Ananas comosus]
Length = 76
Score = 80.5 bits (197), Expect = 3e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 4 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 44
>gb|OAY82556.1| 40S ribosomal protein S28, partial [Ananas comosus]
Length = 76
Score = 80.5 bits (197), Expect = 3e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 4 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 44
>gb|OUZ99539.1| Ribosomal protein S28e [Macleaya cordata]
gb|OVA18975.1| Ribosomal protein S28e [Macleaya cordata]
gb|OVA20666.1| Ribosomal protein S28e [Macleaya cordata]
gb|OVA20667.1| Ribosomal protein S28e [Macleaya cordata]
Length = 65
Score = 80.1 bits (196), Expect = 3e-17
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVV+KVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 4 QVKLAVVIKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 44
>gb|KMZ73331.1| 40S ribosomal protein S28 [Zostera marina]
Length = 65
Score = 80.1 bits (196), Expect = 3e-17
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVK+MGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 4 QVKLAVVVKIMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 44
>gb|OAY80870.1| 40S ribosomal protein S28, partial [Ananas comosus]
Length = 79
Score = 80.5 bits (197), Expect = 3e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 18 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 58
>ref|XP_019052660.1| PREDICTED: 40S ribosomal protein S28-like [Nelumbo nucifera]
Length = 70
Score = 80.1 bits (196), Expect = 4e-17
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLA+VVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 4 QVKLAIVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 44
>emb|CDM87113.1| unnamed protein product [Triticum aestivum]
Length = 86
Score = 80.5 bits (197), Expect = 4e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 25 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 65
>gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticum aestivum]
Length = 86
Score = 80.5 bits (197), Expect = 4e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 25 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 65
>gb|KMZ71242.1| 40S ribosomal protein S28 [Zostera marina]
Length = 65
Score = 79.7 bits (195), Expect = 5e-17
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVK+MGRTGSRGQVTQVRVKFLDDQNR+IMRN+KG
Sbjct: 4 QVKLAVVVKIMGRTGSRGQVTQVRVKFLDDQNRLIMRNIKG 44
>ref|XP_011627494.1| 40S ribosomal protein S28 [Amborella trichopoda]
ref|XP_011626505.1| 40S ribosomal protein S28 [Amborella trichopoda]
Length = 65
Score = 79.7 bits (195), Expect = 5e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKG
Sbjct: 4 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKG 44
>gb|EEE58387.1| hypothetical protein OsJ_09549 [Oryza sativa Japonica Group]
Length = 93
Score = 80.5 bits (197), Expect = 5e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 32 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 72
>gb|OQU92746.1| hypothetical protein SORBI_3001G402050, partial [Sorghum bicolor]
Length = 101
Score = 80.5 bits (197), Expect = 6e-17
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 1 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRIIMRNVKG 123
QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKG
Sbjct: 40 QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKG 80