BLASTX nr result

ID: Ophiopogon23_contig00003446 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00003446
         (1142 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020271053.1| protein PIN-LIKES 3-like isoform X1 [Asparag...    45   9e-07
ref|XP_020271078.1| protein PIN-LIKES 4-like isoform X2 [Asparag...    45   9e-07
gb|ONK79012.1| uncharacterized protein A4U43_C01F1970 [Asparagus...    61   3e-06

>ref|XP_020271053.1| protein PIN-LIKES 3-like isoform X1 [Asparagus officinalis]
 ref|XP_020271060.1| protein PIN-LIKES 3-like isoform X1 [Asparagus officinalis]
 ref|XP_020271066.1| protein PIN-LIKES 3-like isoform X1 [Asparagus officinalis]
 ref|XP_020271072.1| protein PIN-LIKES 3-like isoform X1 [Asparagus officinalis]
          Length = 418

 Score = 44.7 bits (104), Expect(2) = 9e-07
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = +2

Query: 941  DPLYHFILLLQYVAPPAMNISTFCLLYK 1024
            DPLYHFILLLQY  PPAMNI++   +++
Sbjct: 358  DPLYHFILLLQYAVPPAMNITSMVQMFE 385



 Score = 38.1 bits (87), Expect(2) = 9e-07
 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = +1

Query: 787 IPSFHLTTGGNLTSGDDISPLFLELYLSDTV-----LTLVGIFIVRHAAHLVVV 933
           IP  HL TGGNLT G     +   + L   +     L L+GIFIV+ A HL +V
Sbjct: 302 IPCIHLITGGNLTKGLQGPTIKFSIILGVMIVRYIALPLIGIFIVQWAVHLGLV 355


>ref|XP_020271078.1| protein PIN-LIKES 4-like isoform X2 [Asparagus officinalis]
          Length = 339

 Score = 44.7 bits (104), Expect(2) = 9e-07
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = +2

Query: 941  DPLYHFILLLQYVAPPAMNISTFCLLYK 1024
            DPLYHFILLLQY  PPAMNI++   +++
Sbjct: 279  DPLYHFILLLQYAVPPAMNITSMVQMFE 306



 Score = 38.1 bits (87), Expect(2) = 9e-07
 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = +1

Query: 787 IPSFHLTTGGNLTSGDDISPLFLELYLSDTV-----LTLVGIFIVRHAAHLVVV 933
           IP  HL TGGNLT G     +   + L   +     L L+GIFIV+ A HL +V
Sbjct: 223 IPCIHLITGGNLTKGLQGPTIKFSIILGVMIVRYIALPLIGIFIVQWAVHLGLV 276


>gb|ONK79012.1| uncharacterized protein A4U43_C01F1970 [Asparagus officinalis]
          Length = 887

 Score = 60.8 bits (146), Expect = 3e-06
 Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
 Frame = +1

Query: 787 IPSFHLTTGGNLTSGDDISPLFLELYLSDTVLTLVGIFIVRHAAHLVVVQ--------FR 942
           IP  HL TGGNLT GD+    F+      TV+ LV   I  ++ H+             R
Sbjct: 223 IPCIHLITGGNLTKGDNY---FI------TVVILVPFNIASNSRHIYSSMGSSSRPGALR 273

Query: 943 SFISFHSAATICCSACNEH 999
           SFISF+SAATICCS CNEH
Sbjct: 274 SFISFYSAATICCSTCNEH 292


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