BLASTX nr result

ID: Ophiopogon23_contig00002503 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00002503
         (675 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009384081.1| PREDICTED: serine/arginine-rich splicing fac...    49   1e-08
ref|XP_020263413.1| serine/arginine-rich splicing factor RS31-li...    61   8e-08
ref|XP_010252666.1| PREDICTED: serine/arginine-rich splicing fac...    58   2e-06

>ref|XP_009384081.1| PREDICTED: serine/arginine-rich splicing factor RS31-like isoform
           X1 [Musa acuminata subsp. malaccensis]
 ref|XP_018675697.1| PREDICTED: serine/arginine-rich splicing factor RS31-like isoform
           X1 [Musa acuminata subsp. malaccensis]
          Length = 273

 Score = 48.5 bits (114), Expect(2) = 1e-08
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +2

Query: 527 QISAGFAFVYFXXXXXXXXXXXXLHDRSFGHSKRRHSEEWSRQGERG 667
           QI+AG+AFVYF            L    FG+S+RR S EWSRQG+RG
Sbjct: 61  QINAGYAFVYFEDERDAGDAIRGLDGIPFGYSRRRLSVEWSRQGDRG 107



 Score = 39.3 bits (90), Expect(2) = 1e-08
 Identities = 19/41 (46%), Positives = 24/41 (58%)
 Frame = +3

Query: 420 YAQQ*LLTLELTYMLPCFNSHHTRIPLFKF*CPSGLKYLQG 542
           + QQ LLTL+LTY   CF+ H+ R P     C SGL+   G
Sbjct: 25  HVQQCLLTLDLTYTTSCFSCHYRRAPFSHSICSSGLQINAG 65


>ref|XP_020263413.1| serine/arginine-rich splicing factor RS31-like [Asparagus
           officinalis]
          Length = 208

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/51 (56%), Positives = 33/51 (64%)
 Frame = +2

Query: 521 RPQISAGFAFVYFXXXXXXXXXXXXLHDRSFGHSKRRHSEEWSRQGERGGP 673
           R  + +GFAFVYF            LHDR FG+S+RR S EWSRQGERGGP
Sbjct: 30  RIDMKSGFAFVYFEDERDAEDAIRDLHDRPFGYSRRRLSVEWSRQGERGGP 80


>ref|XP_010252666.1| PREDICTED: serine/arginine-rich splicing factor RS31-like isoform
           X3 [Nelumbo nucifera]
          Length = 228

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/58 (53%), Positives = 35/58 (60%)
 Frame = +2

Query: 494 SIIQILMSIRPQISAGFAFVYFXXXXXXXXXXXXLHDRSFGHSKRRHSEEWSRQGERG 667
           SII ILM I   I AGFAFVYF            L D  FG+S+RR S EW+RQG+RG
Sbjct: 5   SIIHILMFISLHIFAGFAFVYFDDERDAEDAIRGLDDTPFGYSRRRLSVEWARQGDRG 62


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