BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00002496
         (881 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK73747.1| uncharacterized protein A4U43_C04F34840 [Asparagu...   351   e-109
ref|XP_020263709.1| DNA-directed RNA polymerase I subunit 2 isof...   351   e-109
ref|XP_020263708.1| DNA-directed RNA polymerase I subunit 2 isof...   351   e-109
gb|ONM05447.1| DNA-directed RNA polymerase I subunit 2 [Zea mays]     299   2e-98
ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I sub...   314   3e-95
ref|XP_008806649.1| PREDICTED: DNA-directed RNA polymerase I sub...   313   8e-95
gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5...   306   1e-94
gb|ONM05448.1| DNA-directed RNA polymerase I subunit 2 [Zea mays]     299   3e-94
dbj|GAU41869.1| hypothetical protein TSUD_366170 [Trifolium subt...   288   4e-94
gb|OAY72747.1| DNA-directed RNA polymerase I subunit 2 [Ananas c...   310   5e-94
ref|XP_015614313.1| PREDICTED: DNA-directed RNA polymerase I sub...   306   7e-94
gb|PNY10662.1| DNA-directed RNA polymerase i subunit rpa2-like p...   285   2e-93
gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family ...   306   3e-93
ref|XP_020093427.1| DNA-directed RNA polymerase I subunit 2 [Ana...   308   4e-93
ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I sub...   307   1e-92
gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japo...   306   1e-92
gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indi...   305   1e-92
ref|XP_015614312.1| PREDICTED: DNA-directed RNA polymerase I sub...   306   2e-92
ref|XP_015697461.1| PREDICTED: DNA-directed RNA polymerase I sub...   303   4e-92
ref|XP_021683285.1| DNA-directed RNA polymerase I subunit 2 isof...   303   5e-92

>gb|ONK73747.1| uncharacterized protein A4U43_C04F34840 [Asparagus officinalis]
          Length = 1087

 Score =  351 bits (901), Expect = e-109
 Identities = 179/219 (81%), Positives = 191/219 (87%), Gaps = 8/219 (3%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGF 722
            AAKAGSL G+F DATPFASSV+       SERSS VD+LGP+LASHGFNYHGSEVLYSGF
Sbjct: 863  AAKAGSLHGKFIDATPFASSVDKKDGKERSERSSLVDELGPMLASHGFNYHGSEVLYSGF 922

Query: 721  YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERD 542
            YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPV           GEMERD
Sbjct: 923  YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVGGRKRGGGIRFGEMERD 982

Query: 541  SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPT 365
            SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKR++ +IPG+PQ +    
Sbjct: 983  SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRIVQEIPGVPQTRTPKN 1042

Query: 364  FTCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            FTC+ACKT+KGMETVAMPYVFRYLA ELAAMNI+MELKL
Sbjct: 1043 FTCHACKTKKGMETVAMPYVFRYLAAELAAMNIRMELKL 1081


>ref|XP_020263709.1| DNA-directed RNA polymerase I subunit 2 isoform X2 [Asparagus
            officinalis]
          Length = 1160

 Score =  351 bits (901), Expect = e-109
 Identities = 179/219 (81%), Positives = 191/219 (87%), Gaps = 8/219 (3%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGF 722
            AAKAGSL G+F DATPFASSV+       SERSS VD+LGP+LASHGFNYHGSEVLYSGF
Sbjct: 936  AAKAGSLHGKFIDATPFASSVDKKDGKERSERSSLVDELGPMLASHGFNYHGSEVLYSGF 995

Query: 721  YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERD 542
            YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPV           GEMERD
Sbjct: 996  YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVGGRKRGGGIRFGEMERD 1055

Query: 541  SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPT 365
            SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKR++ +IPG+PQ +    
Sbjct: 1056 SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRIVQEIPGVPQTRTPKN 1115

Query: 364  FTCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            FTC+ACKT+KGMETVAMPYVFRYLA ELAAMNI+MELKL
Sbjct: 1116 FTCHACKTKKGMETVAMPYVFRYLAAELAAMNIRMELKL 1154


>ref|XP_020263708.1| DNA-directed RNA polymerase I subunit 2 isoform X1 [Asparagus
            officinalis]
          Length = 1163

 Score =  351 bits (901), Expect = e-109
 Identities = 179/219 (81%), Positives = 191/219 (87%), Gaps = 8/219 (3%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGF 722
            AAKAGSL G+F DATPFASSV+       SERSS VD+LGP+LASHGFNYHGSEVLYSGF
Sbjct: 939  AAKAGSLHGKFIDATPFASSVDKKDGKERSERSSLVDELGPMLASHGFNYHGSEVLYSGF 998

Query: 721  YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERD 542
            YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPV           GEMERD
Sbjct: 999  YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVGGRKRGGGIRFGEMERD 1058

Query: 541  SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPT 365
            SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKR++ +IPG+PQ +    
Sbjct: 1059 SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRIVQEIPGVPQTRTPKN 1118

Query: 364  FTCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            FTC+ACKT+KGMETVAMPYVFRYLA ELAAMNI+MELKL
Sbjct: 1119 FTCHACKTKKGMETVAMPYVFRYLAAELAAMNIRMELKL 1157


>gb|ONM05447.1| DNA-directed RNA polymerase I subunit 2 [Zea mays]
          Length = 261

 Score =  299 bits (765), Expect = 2e-98
 Identities = 151/226 (66%), Positives = 181/226 (80%), Gaps = 8/226 (3%)
 Frame = -2

Query: 880 AAKAGSLLGEFKDATPFASSVESERSSQ-----VDKLGPILASHGFNYHGSEVLYSGFYG 716
           AAKAGSL G+F DATPFA+S++ ++ S      VD+LGP+LAS+GFNYHG+EVLYSG +G
Sbjct: 34  AAKAGSLHGKFIDATPFANSLKKDKDSDKPNSIVDELGPMLASYGFNYHGNEVLYSGVFG 93

Query: 715 TEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSV 536
           TEM CEIFIGPVYYQRLRHMVSDKFQVR+TG +D ITRQP+           GEMERD++
Sbjct: 94  TEMDCEIFIGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKHGGGIRFGEMERDAL 153

Query: 535 LAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPT 365
           LAHG++YLLHDRLHSCSDYHIA+VCSFCGSLLTAT+I+   Q+K   ++ G+P  + +  
Sbjct: 154 LAHGSSYLLHDRLHSCSDYHIADVCSFCGSLLTATMIKSDTQKKVKHEMLGLPTVRPAKN 213

Query: 364 FTCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKLK*QSWGP 227
           F C ACKT KGMETVAMPYVFRYLA ELAAMNIK+EL+L  +S  P
Sbjct: 214 FACQACKTSKGMETVAMPYVFRYLAAELAAMNIKLELRLSNKSGLP 259


>ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Elaeis
            guineensis]
          Length = 1175

 Score =  314 bits (804), Expect = 3e-95
 Identities = 160/219 (73%), Positives = 180/219 (82%), Gaps = 8/219 (3%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGF 722
            AAK GSL G+F DATPF +SV        S+ SS VD+LGP+LAS+GFNYHG EVLYSG 
Sbjct: 951  AAKGGSLHGKFVDATPFQNSVSEKDEDGPSKASSLVDELGPMLASYGFNYHGVEVLYSGV 1010

Query: 721  YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERD 542
            +GTE+TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVD ITRQP+           GEMERD
Sbjct: 1011 FGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERD 1070

Query: 541  SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPT 365
            SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCG +LTA+VIQ QKR + +I G+P A+   +
Sbjct: 1071 SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGGVLTASVIQPQKRAIREIHGLPPARTPKS 1130

Query: 364  FTCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            +TC+ACKT KGMETVAMPYVF+YLA ELAAMNIKMEL+L
Sbjct: 1131 YTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMELRL 1169


>ref|XP_008806649.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Phoenix
            dactylifera]
          Length = 1177

 Score =  313 bits (801), Expect = 8e-95
 Identities = 159/219 (72%), Positives = 181/219 (82%), Gaps = 8/219 (3%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGF 722
            AAK GSL G+F DATPF +SV        S+ S+ VD+LGP+LAS+GFNYHG EVLYSG 
Sbjct: 951  AAKGGSLHGKFVDATPFQNSVSEKDEDRPSKSSTLVDELGPMLASYGFNYHGVEVLYSGV 1010

Query: 721  YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERD 542
            +GTE+TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVD ITRQP+           GEMERD
Sbjct: 1011 FGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERD 1070

Query: 541  SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPT 365
            SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGS+LTA+VIQ QKR + +I G+P A+   +
Sbjct: 1071 SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSVLTASVIQPQKRAVREIHGLPPARTPKS 1130

Query: 364  FTCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            +TC+ACKT KGMETVAMPYVF+YLA E+AAMNIKMEL+L
Sbjct: 1131 YTCHACKTSKGMETVAMPYVFKYLAAEMAAMNIKMELQL 1169


>gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5'-partial, partial
            [Oryza sativa Japonica Group]
          Length = 855

 Score =  306 bits (785), Expect = 1e-94
 Identities = 152/214 (71%), Positives = 176/214 (82%), Gaps = 3/214 (1%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVESERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTC 701
            AAKAGSL G+F DATPFASSV+   +S VD+LGP+LAS+GFNYHG+E+LYSG +GTEM C
Sbjct: 628  AAKAGSLKGKFIDATPFASSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKC 687

Query: 700  EIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGA 521
            EIF+GPVYYQRLRHMVSDKFQVR+TG +D ITRQP+           GEMERD++LAHGA
Sbjct: 688  EIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGA 747

Query: 520  AYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNA 350
            +YLLHDRLHSCSDYHIA+VCS CGSLLTATVI+   Q+K   D+ G+P  K    F C A
Sbjct: 748  SYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQA 807

Query: 349  CKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            CKT KGMETVAMPYVFRYLA+ELAAMNIK+EL+L
Sbjct: 808  CKTSKGMETVAMPYVFRYLASELAAMNIKLELRL 841


>gb|ONM05448.1| DNA-directed RNA polymerase I subunit 2 [Zea mays]
          Length = 589

 Score =  299 bits (765), Expect = 3e-94
 Identities = 151/226 (66%), Positives = 181/226 (80%), Gaps = 8/226 (3%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVESERSSQ-----VDKLGPILASHGFNYHGSEVLYSGFYG 716
            AAKAGSL G+F DATPFA+S++ ++ S      VD+LGP+LAS+GFNYHG+EVLYSG +G
Sbjct: 362  AAKAGSLHGKFIDATPFANSLKKDKDSDKPNSIVDELGPMLASYGFNYHGNEVLYSGVFG 421

Query: 715  TEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSV 536
            TEM CEIFIGPVYYQRLRHMVSDKFQVR+TG +D ITRQP+           GEMERD++
Sbjct: 422  TEMDCEIFIGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKHGGGIRFGEMERDAL 481

Query: 535  LAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPT 365
            LAHG++YLLHDRLHSCSDYHIA+VCSFCGSLLTAT+I+   Q+K   ++ G+P  + +  
Sbjct: 482  LAHGSSYLLHDRLHSCSDYHIADVCSFCGSLLTATMIKSDTQKKVKHEMLGLPTVRPAKN 541

Query: 364  FTCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKLK*QSWGP 227
            F C ACKT KGMETVAMPYVFRYLA ELAAMNIK+EL+L  +S  P
Sbjct: 542  FACQACKTSKGMETVAMPYVFRYLAAELAAMNIKLELRLSNKSGLP 587


>dbj|GAU41869.1| hypothetical protein TSUD_366170 [Trifolium subterraneum]
          Length = 255

 Score =  288 bits (736), Expect = 4e-94
 Identities = 148/215 (68%), Positives = 165/215 (76%), Gaps = 8/215 (3%)
 Frame = -2

Query: 868 GSLLGEFKDATPFASSV-------ESERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTE 710
           GSL G+FKDATPF SSV       ES+ +S VD+LG +L   GFNYHG EVLYSG YGTE
Sbjct: 30  GSLHGKFKDATPFRSSVKTDGEKSESKSASLVDELGVMLKEKGFNYHGCEVLYSGVYGTE 89

Query: 709 MTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLA 530
           + CEIFIGPVYYQRLRHMVSDK+QVRSTG +DP+TRQPV           GEMERDS+LA
Sbjct: 90  LKCEIFIGPVYYQRLRHMVSDKYQVRSTGPIDPVTRQPVKGRKRGGGVRFGEMERDSLLA 149

Query: 529 HGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQK-RLLDIPGIPQAKVSPTFTCN 353
           HGAAYLLHDRLH+CSDYHIA+VCS CGS+LT T IQ  K  +  I G+P  K     TC+
Sbjct: 150 HGAAYLLHDRLHTCSDYHIADVCSICGSMLTTTFIQPPKLPVRQIGGLPPRKPPSKVTCD 209

Query: 352 ACKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
           ACKT KGMETVAMPY+FRYLA ELAAMNIKM LKL
Sbjct: 210 ACKTSKGMETVAMPYIFRYLAAELAAMNIKMTLKL 244


>gb|OAY72747.1| DNA-directed RNA polymerase I subunit 2 [Ananas comosus]
          Length = 1105

 Score =  310 bits (793), Expect = 5e-94
 Identities = 157/218 (72%), Positives = 179/218 (82%), Gaps = 7/218 (3%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVESERS------SQVDKLGPILASHGFNYHGSEVLYSGFY 719
            AAK GSL G+F DATPFA+S ++ +       S VD+LGP+LASHGFNYHG EVLYSG +
Sbjct: 880  AAKGGSLHGKFIDATPFATSKDANQDKPSKPYSVVDELGPLLASHGFNYHGVEVLYSGVF 939

Query: 718  GTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDS 539
            GTE+TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVD ITRQP+           GEMERD+
Sbjct: 940  GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDA 999

Query: 538  VLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTF 362
            +LAHGAAYLLHDRLHSCSDYHIA+VCS CGS+LTAT IQ QKR + +I G+P A+   +F
Sbjct: 1000 MLAHGAAYLLHDRLHSCSDYHIADVCSNCGSVLTATTIQPQKRAVREILGLPPARAPKSF 1059

Query: 361  TCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            TC+ACKT KGMETVAMPYVF+YLA ELAAMNIKMEL+L
Sbjct: 1060 TCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMELRL 1097


>ref|XP_015614313.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X2 [Oryza
            sativa Japonica Group]
          Length = 943

 Score =  306 bits (785), Expect = 7e-94
 Identities = 152/214 (71%), Positives = 176/214 (82%), Gaps = 3/214 (1%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVESERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTC 701
            AAKAGSL G+F DATPFASSV+   +S VD+LGP+LAS+GFNYHG+E+LYSG +GTEM C
Sbjct: 716  AAKAGSLKGKFIDATPFASSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKC 775

Query: 700  EIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGA 521
            EIF+GPVYYQRLRHMVSDKFQVR+TG +D ITRQP+           GEMERD++LAHGA
Sbjct: 776  EIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGA 835

Query: 520  AYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNA 350
            +YLLHDRLHSCSDYHIA+VCS CGSLLTATVI+   Q+K   D+ G+P  K    F C A
Sbjct: 836  SYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQA 895

Query: 349  CKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            CKT KGMETVAMPYVFRYLA+ELAAMNIK+EL+L
Sbjct: 896  CKTSKGMETVAMPYVFRYLASELAAMNIKLELRL 929


>gb|PNY10662.1| DNA-directed RNA polymerase i subunit rpa2-like protein [Trifolium
           pratense]
          Length = 244

 Score =  285 bits (730), Expect = 2e-93
 Identities = 146/215 (67%), Positives = 166/215 (77%), Gaps = 8/215 (3%)
 Frame = -2

Query: 868 GSLLGEFKDATPFASSVE-------SERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTE 710
           GSL G++KDATPF SSV+       S+ +S VD+LG +L   GFNYHG EVLYSG YGTE
Sbjct: 28  GSLHGKYKDATPFRSSVKTDGEKSGSKSASLVDELGVMLKEKGFNYHGCEVLYSGVYGTE 87

Query: 709 MTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLA 530
           +TCEIFIGPVYYQRLRHMVSDK+QVRSTG +DP+TRQPV           GEMERDS+LA
Sbjct: 88  LTCEIFIGPVYYQRLRHMVSDKYQVRSTGPIDPVTRQPVKGRKRGGGVRFGEMERDSLLA 147

Query: 529 HGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQK-RLLDIPGIPQAKVSPTFTCN 353
           HGAAYLLHDRLH+CSDYHIA+VCS CGSLLT T IQ QK  +  I G+P  K      C+
Sbjct: 148 HGAAYLLHDRLHTCSDYHIADVCSICGSLLTTTFIQPQKLPVRQIVGLPPRKPPSKVACH 207

Query: 352 ACKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
           AC+T KGMETVAMPY+FRYLA ELA+MNIKM LKL
Sbjct: 208 ACQTGKGMETVAMPYIFRYLAAELASMNIKMTLKL 242


>gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family protein, expressed
            [Oryza sativa Japonica Group]
          Length = 1044

 Score =  306 bits (785), Expect = 3e-93
 Identities = 152/214 (71%), Positives = 176/214 (82%), Gaps = 3/214 (1%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVESERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTC 701
            AAKAGSL G+F DATPFASSV+   +S VD+LGP+LAS+GFNYHG+E+LYSG +GTEM C
Sbjct: 817  AAKAGSLKGKFIDATPFASSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKC 876

Query: 700  EIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGA 521
            EIF+GPVYYQRLRHMVSDKFQVR+TG +D ITRQP+           GEMERD++LAHGA
Sbjct: 877  EIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGA 936

Query: 520  AYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNA 350
            +YLLHDRLHSCSDYHIA+VCS CGSLLTATVI+   Q+K   D+ G+P  K    F C A
Sbjct: 937  SYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQA 996

Query: 349  CKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            CKT KGMETVAMPYVFRYLA+ELAAMNIK+EL+L
Sbjct: 997  CKTSKGMETVAMPYVFRYLASELAAMNIKLELRL 1030


>ref|XP_020093427.1| DNA-directed RNA polymerase I subunit 2 [Ananas comosus]
          Length = 1168

 Score =  308 bits (789), Expect = 4e-93
 Identities = 156/218 (71%), Positives = 179/218 (82%), Gaps = 7/218 (3%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVESERS------SQVDKLGPILASHGFNYHGSEVLYSGFY 719
            AAK GSL G+F DATPFA+S ++ +       S VD+LGP+LASHGFNYHG EVLYSG +
Sbjct: 943  AAKGGSLHGKFIDATPFATSKDANQDNPSKPYSVVDELGPLLASHGFNYHGVEVLYSGVF 1002

Query: 718  GTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDS 539
            GTE+TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVD ITRQP+           GEMERD+
Sbjct: 1003 GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDA 1062

Query: 538  VLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPTF 362
            +LAHGAAYLLHDRLHSCSDYHIA+VCS CGS+LTAT IQ QKR + +I G+P A+   +F
Sbjct: 1063 MLAHGAAYLLHDRLHSCSDYHIADVCSNCGSVLTATTIQPQKRAVREILGLPPARAPKSF 1122

Query: 361  TCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            TC+AC+T KGMETVAMPYVF+YLA ELAAMNIKMEL+L
Sbjct: 1123 TCHACETSKGMETVAMPYVFKYLAAELAAMNIKMELRL 1160


>ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Musa acuminata
            subsp. malaccensis]
          Length = 1169

 Score =  307 bits (786), Expect = 1e-92
 Identities = 157/223 (70%), Positives = 178/223 (79%), Gaps = 8/223 (3%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSV-------ESERSSQVDKLGPILASHGFNYHGSEVLYSGF 722
            AAK GSL G+F DATPF+ SV        S+ SS VD+LGP+L S+GFNYHG EVLYSG 
Sbjct: 943  AAKGGSLHGKFVDATPFSRSVCNADEDKPSKSSSVVDELGPMLTSYGFNYHGVEVLYSGV 1002

Query: 721  YGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERD 542
            YGTE+TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVD ITRQP+           GEMERD
Sbjct: 1003 YGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERD 1062

Query: 541  SVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSPT 365
            +VLAHGAAYLLHDRLHSCSDYHIA+VCS+CGS+LTAT IQ QKR + +I G+P A+    
Sbjct: 1063 AVLAHGAAYLLHDRLHSCSDYHIADVCSYCGSVLTATAIQPQKRAVREIHGLPPARTPKN 1122

Query: 364  FTCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKLK*QS 236
            + C +CKT KGMETVAMPYVF+YLA ELAAMNIKMEL+L  Q+
Sbjct: 1123 YICQSCKTGKGMETVAMPYVFKYLAAELAAMNIKMELQLSNQA 1165


>gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japonica Group]
          Length = 1150

 Score =  306 bits (785), Expect = 1e-92
 Identities = 152/214 (71%), Positives = 176/214 (82%), Gaps = 3/214 (1%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVESERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTC 701
            AAKAGSL G+F DATPFASSV+   +S VD+LGP+LAS+GFNYHG+E+LYSG +GTEM C
Sbjct: 923  AAKAGSLKGKFIDATPFASSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKC 982

Query: 700  EIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGA 521
            EIF+GPVYYQRLRHMVSDKFQVR+TG +D ITRQP+           GEMERD++LAHGA
Sbjct: 983  EIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGA 1042

Query: 520  AYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNA 350
            +YLLHDRLHSCSDYHIA+VCS CGSLLTATVI+   Q+K   D+ G+P  K    F C A
Sbjct: 1043 SYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQA 1102

Query: 349  CKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            CKT KGMETVAMPYVFRYLA+ELAAMNIK+EL+L
Sbjct: 1103 CKTSKGMETVAMPYVFRYLASELAAMNIKLELRL 1136


>gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indica Group]
          Length = 1086

 Score =  305 bits (782), Expect = 1e-92
 Identities = 151/214 (70%), Positives = 176/214 (82%), Gaps = 3/214 (1%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVESERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTC 701
            AAKAGSL G+F DATPFASSV+   +S VD+LGP+LAS+GFNYHG+E+LYSG +GTEM C
Sbjct: 859  AAKAGSLKGKFIDATPFASSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKC 918

Query: 700  EIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGA 521
            EIF+GPVYYQRLRHMVSDKFQVR+TG +D ITRQP+           GEMERD++LAHGA
Sbjct: 919  EIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGA 978

Query: 520  AYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNA 350
            +YLLHDRLHSCSDYHIA+VCS CGSLLTATVI+   Q+K   D+ G+P  K    F C A
Sbjct: 979  SYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQA 1038

Query: 349  CKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            CKT +GMETVAMPYVFRYLA+ELAAMNIK+EL+L
Sbjct: 1039 CKTSRGMETVAMPYVFRYLASELAAMNIKLELRL 1072


>ref|XP_015614312.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X1 [Oryza
            sativa Japonica Group]
          Length = 1174

 Score =  306 bits (785), Expect = 2e-92
 Identities = 152/214 (71%), Positives = 176/214 (82%), Gaps = 3/214 (1%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVESERSSQVDKLGPILASHGFNYHGSEVLYSGFYGTEMTC 701
            AAKAGSL G+F DATPFASSV+   +S VD+LGP+LAS+GFNYHG+E+LYSG +GTEM C
Sbjct: 947  AAKAGSLKGKFIDATPFASSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKC 1006

Query: 700  EIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDSVLAHGA 521
            EIF+GPVYYQRLRHMVSDKFQVR+TG +D ITRQP+           GEMERD++LAHGA
Sbjct: 1007 EIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGA 1066

Query: 520  AYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSPTFTCNA 350
            +YLLHDRLHSCSDYHIA+VCS CGSLLTATVI+   Q+K   D+ G+P  K    F C A
Sbjct: 1067 SYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQA 1126

Query: 349  CKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
            CKT KGMETVAMPYVFRYLA+ELAAMNIK+EL+L
Sbjct: 1127 CKTSKGMETVAMPYVFRYLASELAAMNIKLELRL 1160


>ref|XP_015697461.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X2 [Oryza
            brachyantha]
          Length = 1006

 Score =  303 bits (776), Expect = 4e-92
 Identities = 154/220 (70%), Positives = 176/220 (80%), Gaps = 9/220 (4%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVESE------RSSQVDKLGPILASHGFNYHGSEVLYSGFY 719
            AAKAGSL G+F DATPF+SSVE         +S VD+LGP+LAS+GFNYHG+EVLYSG +
Sbjct: 775  AAKAGSLTGKFMDATPFSSSVEKRDENSCTSNSIVDELGPMLASYGFNYHGTEVLYSGVF 834

Query: 718  GTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMERDS 539
            GTEM CEIF+GPVYYQRLRHMVSDKFQVR+TG +D ITRQPV           GEMERD+
Sbjct: 835  GTEMNCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPVGGRKFGGGIRFGEMERDA 894

Query: 538  VLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQ---QQKRLLDIPGIPQAKVSP 368
            VLAHGA+YLLHDRLHSCSDYHIA+VCS CGSLLTATVI+   Q+K   D+ G+P  + + 
Sbjct: 895  VLAHGASYLLHDRLHSCSDYHIADVCSLCGSLLTATVIKSESQKKAKQDMLGLPTVRPAK 954

Query: 367  TFTCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKL 248
             F C ACKT KGMETVAMPYVFRYLA ELAAMNIK+EL+L
Sbjct: 955  NFACQACKTTKGMETVAMPYVFRYLAAELAAMNIKLELRL 994


>ref|XP_021683285.1| DNA-directed RNA polymerase I subunit 2 isoform X2 [Hevea
            brasiliensis]
          Length = 1031

 Score =  303 bits (776), Expect = 5e-92
 Identities = 155/221 (70%), Positives = 174/221 (78%), Gaps = 9/221 (4%)
 Frame = -2

Query: 880  AAKAGSLLGEFKDATPFASSVE--------SERSSQVDKLGPILASHGFNYHGSEVLYSG 725
            AAK GSL G+F DATPFASSV+        SE  S VD LG +L SHGFNYHG EVLYSG
Sbjct: 808  AAKGGSLNGKFVDATPFASSVKKANGGETKSESESLVDDLGEMLRSHGFNYHGVEVLYSG 867

Query: 724  FYGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVXXXXXXXXXXXGEMER 545
             YGTE+TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVD ITRQP+           GEMER
Sbjct: 868  VYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMER 927

Query: 544  DSVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRLL-DIPGIPQAKVSP 368
            D++LAHGAAYLLHDRLH+CSDYHIA+VCS CGS+LT + IQQQKR++ DI G+P  +   
Sbjct: 928  DAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSFIQQQKRVVRDIGGLPPVRAPK 987

Query: 367  TFTCNACKTRKGMETVAMPYVFRYLATELAAMNIKMELKLK 245
               C+AC+T KGMETVAMPYVFRYLA ELAAMNIKM ++LK
Sbjct: 988  KVACHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTVRLK 1028