BLASTX nr result

ID: Ophiopogon23_contig00001145 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00001145
         (612 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017702025.1| PREDICTED: LOW QUALITY PROTEIN: filament-lik...    71   8e-11
ref|XP_010917980.1| PREDICTED: filament-like plant protein 4 iso...    69   4e-10
ref|XP_010908836.1| PREDICTED: filament-like plant protein 4 [El...    58   2e-06

>ref|XP_017702025.1| PREDICTED: LOW QUALITY PROTEIN: filament-like plant protein 4
            [Phoenix dactylifera]
          Length = 1081

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
 Frame = -2

Query: 611  AMQPPIENSSSA--DKLQLNDYLSQGEPSPSSYSLQSALNTAQPDQASTDNDDASSVILR 438
            AM+PP E+ SS+  ++ +++DYL + EP PS  + Q  +  A P  + ++ ++A+  + +
Sbjct: 953  AMRPPAESLSSSPNNRHRMSDYLLENEPGPSGINPQ--VMRASPHSSHSEMENAAVPMTQ 1010

Query: 437  TGEDDSTLDEYNSHLNASNLD--SLPPRPDGMXXXXXXXXXXXXXXXXSGVLNEKQSRGF 264
                +S LD YNSH++ S+ +  S P  P                      + EKQ RGF
Sbjct: 1011 RTGGESPLDGYNSHMSPSDTEASSFPRSPISSKRQKHRSSRPSSSTSFPNTMPEKQGRGF 1070

Query: 263  SRLFSRGKSDH 231
            SR FS+GKSDH
Sbjct: 1071 SRFFSKGKSDH 1081


>ref|XP_010917980.1| PREDICTED: filament-like plant protein 4 isoform X1 [Elaeis
            guineensis]
 ref|XP_010917981.1| PREDICTED: filament-like plant protein 4 isoform X1 [Elaeis
            guineensis]
          Length = 1078

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
 Frame = -2

Query: 608  MQPPIENSSSA--DKLQLNDYLSQGEPSPSSYSLQSALNTAQPDQASTDNDDASSVILRT 435
            M+PP E+S+S+  ++ +++DYL + EP PS ++ Q+      P  + ++ ++A+  +  T
Sbjct: 954  MRPPAESSTSSPNNRHRMSDYLLENEPGPSGFNRQTL-----PHLSHSEMENAAVPMTHT 1008

Query: 434  GEDDSTLDEYNSHLNASNLD--SLPPRPDGMXXXXXXXXXXXXXXXXSGVLNEKQSRGFS 261
               +S LD YNSH++  + +  S P  P                      + EKQ RGFS
Sbjct: 1009 TGSESPLDGYNSHMSPPDTEASSFPRSPISSKRQKHRSSRASSSTSFPNTMPEKQGRGFS 1068

Query: 260  RLFSRGKSDH 231
            R FS+G+SDH
Sbjct: 1069 RFFSKGRSDH 1078


>ref|XP_010908836.1| PREDICTED: filament-like plant protein 4 [Elaeis guineensis]
          Length = 1076

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
 Frame = -2

Query: 611  AMQPPIENSSSA--DKLQLNDYLSQGEPSPSSYSLQSALNTAQPDQASTDNDDASSVIL- 441
            AM+PP E+ SS   ++  ++D+  + EP P  ++         P  +  +N   +SV + 
Sbjct: 957  AMRPPAESLSSYPNNRYPMSDFFLENEPGPIGFN---------PGHSEMEN---ASVYMT 1004

Query: 440  -RTGEDDSTLDEYNSHLNASNLD--SLPPRPDGMXXXXXXXXXXXXXXXXSGVLNEKQSR 270
             RTG + S LD YNSH++ S+ +  S P  P                      + EK  R
Sbjct: 1005 HRTGSE-SPLDGYNSHMSPSDTEASSFPRSPVSSKRQKHRSSRSSSSISLPNTMPEKHGR 1063

Query: 269  GFSRLFSRGKSDH 231
            GFSR FS+GKSDH
Sbjct: 1064 GFSRFFSKGKSDH 1076


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