BLASTX nr result

ID: Ophiopogon23_contig00000596 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00000596
         (390 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AQK54475.1| DNA topoisomerase 2 [Zea mays]                          54   7e-06

>gb|AQK54475.1| DNA topoisomerase 2 [Zea mays]
          Length = 551

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 25/33 (75%), Positives = 26/33 (78%)
 Frame = -3

Query: 166 IKQSLSLQHGKHYNSLKNLRYGSLMIMTYQVWH 68
           IKQ L LQHGK Y+S K LRYG LMIMT QVWH
Sbjct: 501 IKQILGLQHGKQYDSTKGLRYGHLMIMTDQVWH 533


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