BLASTX nr result

ID: Ophiopogon23_contig00000262 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00000262
         (541 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK69465.1| uncharacterized protein A4U43_C05F23230 [Asparagu...    75   9e-13
ref|XP_020264490.1| RING-H2 finger protein ATL46-like [Asparagus...    75   9e-13

>gb|ONK69465.1| uncharacterized protein A4U43_C05F23230 [Asparagus officinalis]
          Length = 363

 Score = 75.5 bits (184), Expect = 9e-13
 Identities = 45/77 (58%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
 Frame = -3

Query: 218 MVNLGSQSPTTTCVLSQIKTSHGVLQKDSLPLQATQPP-----SSSSRISPXXXXXXXXX 54
           MVNL S SP TT VL QI T +GVLQ+DSLPLQ +QPP     S+SSRISP         
Sbjct: 1   MVNLASPSPETTWVLPQINTINGVLQRDSLPLQTSQPPPAPSSSNSSRISPAILFIIVIL 60

Query: 53  XXXXXVSGLLHLLVRFL 3
                VSGLLHLLVRF+
Sbjct: 61  AVIFFVSGLLHLLVRFI 77


>ref|XP_020264490.1| RING-H2 finger protein ATL46-like [Asparagus officinalis]
          Length = 365

 Score = 75.5 bits (184), Expect = 9e-13
 Identities = 45/77 (58%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
 Frame = -3

Query: 218 MVNLGSQSPTTTCVLSQIKTSHGVLQKDSLPLQATQPP-----SSSSRISPXXXXXXXXX 54
           MVNL S SP TT VL QI T +GVLQ+DSLPLQ +QPP     S+SSRISP         
Sbjct: 1   MVNLASPSPETTWVLPQINTINGVLQRDSLPLQTSQPPPAPSSSNSSRISPAILFIIVIL 60

Query: 53  XXXXXVSGLLHLLVRFL 3
                VSGLLHLLVRF+
Sbjct: 61  AVIFFVSGLLHLLVRFI 77


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