BLASTX nr result

ID: Ophiopogon22_contig00040952 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00040952
         (464 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK80196.1| uncharacterized protein A4U43_C01F14960 [Asparagu...    68   2e-10
ref|XP_020245267.1| LOW QUALITY PROTEIN: reticulon-like protein ...    68   2e-10

>gb|ONK80196.1| uncharacterized protein A4U43_C01F14960 [Asparagus officinalis]
          Length = 373

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 53/142 (37%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
 Frame = +1

Query: 55  SSTPSTPISHQSKP-CLHRTKPDDPTDSPISMHSPNXXXXXXXXXXXXXXXXXXXXXXXX 231
           SSTP+TP+++Q KP  L  +KP D T  PIS+HSPN                        
Sbjct: 4   SSTPTTPVTNQLKPRALLESKPKDQTRPPISIHSPNPVSLHDLLLLSPPPYRKSRPRPKP 63

Query: 232 XXXIVDECVDAVAQAVAA---TP-GSRKKGKSRAAGVSP-XXXXXXXXXXXXXXXXXXXX 396
               VDEC+DA A A +A   TP  SRKKGKSRAAG SP                     
Sbjct: 64  VN--VDECLDAAAAAASAAVTTPISSRKKGKSRAAGASPRNARRARRRLEKENVREEKEL 121

Query: 397 XXXXXXXGVRARRKKPSRARVS 462
                  GVR R+K+ SR++V+
Sbjct: 122 VPFEEEEGVRLRKKRSSRSKVA 143


>ref|XP_020245267.1| LOW QUALITY PROTEIN: reticulon-like protein B17 [Asparagus
           officinalis]
          Length = 435

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 53/142 (37%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
 Frame = +1

Query: 55  SSTPSTPISHQSKP-CLHRTKPDDPTDSPISMHSPNXXXXXXXXXXXXXXXXXXXXXXXX 231
           SSTP+TP+++Q KP  L  +KP D T  PIS+HSPN                        
Sbjct: 4   SSTPTTPVTNQLKPRALLESKPKDQTRPPISIHSPNPVSLHDLLLLSPPPYRKSRPRPKP 63

Query: 232 XXXIVDECVDAVAQAVAA---TP-GSRKKGKSRAAGVSP-XXXXXXXXXXXXXXXXXXXX 396
               VDEC+DA A A +A   TP  SRKKGKSRAAG SP                     
Sbjct: 64  VN--VDECLDAAAAAASAAVTTPISSRKKGKSRAAGASPRNARRARRRLEKENVREEKEL 121

Query: 397 XXXXXXXGVRARRKKPSRARVS 462
                  GVR R+K+ SR++V+
Sbjct: 122 VPFEEEEGVRLRKKRSSRSKVA 143


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