BLASTX nr result

ID: Ophiopogon22_contig00040497 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00040497
         (421 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC13990.1| hypothetical protein RIR_0261600 [Rhizophagus ir...    58   3e-07

>dbj|GBC13990.1| hypothetical protein RIR_0261600 [Rhizophagus irregularis DAOM
           181602]
          Length = 278

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 35/101 (34%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
 Frame = +3

Query: 72  GTSAKCVTREASCKCPINRP--GLYCGFELGINCRGSRSSDIFQCSRSGAN-CRFEPGCK 242
           GT A C     SC C  N    G  CG EL   C  S  S IF+C+      CR+   C 
Sbjct: 19  GTFAYCYNNTGSCTCITNDTIGGFKCGSELNSGC--SDLSSIFRCNPGDTKICRYGT-CT 75

Query: 243 FGCCRLSTGKSFCCKKAGCADCPSTGGSDCCFRPGCPLTPQ 365
            GCC    G S+CCK   C  C          +   P  PQ
Sbjct: 76  LGCCATGDGNSYCCKDYACTGCKKISKLSHLLQSQSPQPPQ 116


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