BLASTX nr result

ID: Ophiopogon22_contig00039966 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00039966
         (718 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAT91128.1| hypothetical protein VIGAN_06243600 [Vigna angul...    62   1e-07
gb|OUC59779.1| hypothetical protein MWQ_09360 [Acinetobacter sei...    54   2e-06

>dbj|BAT91128.1| hypothetical protein VIGAN_06243600 [Vigna angularis var.
           angularis]
          Length = 262

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 50/174 (28%), Positives = 62/174 (35%), Gaps = 1/174 (0%)
 Frame = -3

Query: 680 LRRRHKR*LRQGW*LRQGWELNLRQTWNIRQ*RKVDLWNGWNLRQWW*LDIRNNWNLREW 501
           L  R K  L   W L   W   L + WN    R++DLW  W    WW    R  W    W
Sbjct: 93  LEWRKKGMLWWAWLLWNRWGERLNRWWN----RRLDLWWLWRAWLWWFWMRRLLWGTWFW 148

Query: 500 YLHILSHNLFRNLSLGHNWLIWQGWQLNLWKGWHLW*RWKFRLWQGWNLGQWR-QLNLIH 324
           +         R L+L   WL W   +  LW  W  W   +  LW+GW    WR    L  
Sbjct: 149 WK--------RRLNLWRAWLWWFWMRRLLWGTWFWWFWMRRLLWRGWFWWFWRGWWRLSR 200

Query: 323 SRHFGDEXXXXXXXXXXXWQCRHRESMHLRQWRQFRLRKSWNFRHWNGWDQWWR 162
            R F                   R S+H  +WR F +   W    W  W  +WR
Sbjct: 201 RRRFN-----------RRRSIYRRRSIH--RWRMF-MENLW----WKRWKYYWR 236


>gb|OUC59779.1| hypothetical protein MWQ_09360 [Acinetobacter seifertii]
          Length = 72

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
 Frame = -3

Query: 572 LWNGWNLRQWW*LDIRNNWNLREWYLHILSHNLFRNLSLGHNWLIWQGWQL-NLWKGWHL 396
           LWN WNL   W     N WNL  W       NL+   +L + W +W  W L NLW  W+L
Sbjct: 3   LWNLWNLWNLW-----NLWNL--W-------NLWNLWNLWNLWNLWNLWNLWNLWNLWNL 48

Query: 395 W*RWK-FRLWQGWNL 354
           W  W  + LW  WNL
Sbjct: 49  WNLWNLWNLWNLWNL 63


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