BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00039805
         (3206 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AVA17450.1| RNA-dependent RNA polymerase [Gigaspora margarita...   211   2e-52
gb|ALD89128.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...   172   7e-42
gb|ANR02692.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...   159   3e-40
gb|AHX84133.1| RNA-dependent RNA polymerase [Sclerotinia sclerot...   171   3e-40
emb|CAJ32468.1| RNA-dependent RNA polymerase [Ophiostoma mitovir...   170   5e-40
emb|CEZ26300.1| RNA dependent RNA polymerase [Botrytis cinerea m...   170   7e-40
gb|ALD89100.1| RNA-dependent RNA polymerase [Macrophomina phaseo...   168   2e-39
gb|AHF48630.1| RNA-dependent RNA polymerase [Sclerotinia sclerot...   168   2e-39
gb|AVA17449.1| RNA-dependent RNA polymerase [Gigaspora margarita...   168   4e-39
emb|CEZ26296.1| RNA dependent RNA polymerase [Botrytis cinerea m...   166   1e-38
gb|ALD89126.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...   165   6e-38
ref|YP_002284334.2| RNA-dependent RNA polymerase [Botrytis ciner...   162   2e-37
gb|AGC24232.1| RNA-dependent RNA polymerase [Sclerotinia sclerot...   162   2e-37
ref|YP_009182164.1| RNA dependent RNA polymerase [Sclerotinia sc...   162   2e-37
ref|YP_009272901.1| RNA-dependent RNA polymerase [Fusarium poae ...   161   2e-37
gb|AHX84134.1| RNA-dependent RNA polymerase [Sclerotinia sclerot...   162   3e-37
gb|ANJ77670.1| RNA-dependent RNA polymerase [Sclerotinia nivalis...   160   1e-36
dbj|BAJ23143.2| RNA-directed RNA polymerase [Rhizophagus sp. RF1...   159   3e-36
gb|ALD89119.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...   160   4e-36
gb|AMM45292.1| putative replicase [Macrophomina phaseolina mitov...   159   5e-36

>gb|AVA17450.1| RNA-dependent RNA polymerase [Gigaspora margarita mitovirus 2]
          Length = 986

 Score =  211 bits (537), Expect = 2e-52
 Identities = 207/711 (29%), Positives = 318/711 (44%), Gaps = 17/711 (2%)
 Frame = -3

Query: 2127 WSILVDWDLQRTRNYVIVDPLDPSGLLYLNQAEYLAQSKVCASNDLMLIVVARPGTKAPV 1948
            WS  VDW   +   Y IVDP +P  L+YL + ++    KV  SN   ++V+AR G   P 
Sbjct: 41   WS--VDWFKVKAGFYCIVDPTNPRELIYLGEKDFRDFIKVMLSNREPMVVLARAGENQPK 98

Query: 1947 PTLSSSTPSQNSPWGVEIESKWQRQSRLSWKTFLRLRDEVGRIXXXXXXXXXXXXXSETV 1768
             +    TP   SP        ++  S+     FLR       +                +
Sbjct: 99   DS-EILTPKPKSPHSTVFFRSFRVYSK-----FLRA------LWSEMWEGKLVVPLERNL 146

Query: 1767 GRTVYAWVRTLAHYAEVKNPG-TYVQYFIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYS 1591
               +  W +TL H+    +      Q  I   ++L V+LK+ G      FLKVS  +L  
Sbjct: 147  KFIICNWGKTLLHWLGTSSSSRAQSQGLIQVSKYLMVVLKHRGATGLTIFLKVSFIALNK 206

Query: 1590 YVSGNPLKATIPLGHGIRLRNGLPAVWDRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKH 1411
            Y++G PLK+T PL  G+RL+ GLP+     +R  IR+   K I            + AK 
Sbjct: 207  YLAGEPLKSTFPLKCGMRLQGGLPSWLPAPVRLAIRQKSYKVIRLWSSLLYTYKGMYAKG 266

Query: 1410 PDFDVSTIVKP--HPDFSQNETFKAYQKFCKEVFPTLLTKETGGFKPFRYQSALGYLIRS 1237
                ++++++P  +   ++      +Q F   V+   L    G   P   Q  L  L  S
Sbjct: 267  VP-SIASVLEPEWYTSSTRATWLWGFQDFLANVYYRQLNW-VGLDIPQSDQLPL--LRTS 322

Query: 1236 AGPNLNGPSMTGIQLDAAAWFNRPDNLILDWFTLHGDTKAVNAFSEISKDSHWTQENHPV 1057
            AGP+  G ++ G+  D   W     N       LH   + + A++            +  
Sbjct: 323  AGPS-GGTALAGVLRDLWVWRVFRHN------RLHYSLEQILAYT-----------GNGT 364

Query: 1056 SRQTLRSFCWASRTPLAWP-----EETARTSFNDALENVPTGPILGRLHAINEPAGKVRI 892
            +   LR     ++    +P     + + +  ++ AL +      L RLH I E AGKVR+
Sbjct: 365  ALGFLRHGLAGAKPSQVFPLKVHKKGSCQEGYDIALYDGRKPLALARLHLIYEAAGKVRV 424

Query: 891  VAICDYWTQVALKPIHDFLFDILKGISSDATFDQSGRVEAYFQRGLSP---HWSFDLKAA 721
            +AI DY TQ A  P+HDFL  +L  + +D T DQ+  ++ +  R  S    + S D+ AA
Sbjct: 425  IAILDYMTQWAFAPVHDFLMRLLATVDTDGTSDQNIGLQNFILRIGSRKGIYSSLDISAA 484

Query: 720  TDSIPLALYRACLTPLLRQEGEDIETGERRTNLWASILTDRDFLLPDS--SSVVRYGTGQ 547
            TD+IP  LY   L          +    R    +  +L +R FL P       V+YG GQ
Sbjct: 485  TDTIPWQLYEVIL---------GVMFDARFARHYMRLLRERGFLSPRELPFEFVKYGCGQ 535

Query: 546  PMGALSSWASMAIVHHSLVQFSAINAGLETTWYKDYLVLGDDVDIATK---TAVADGYQS 376
            PMGALSS+  + +VHH++VQ++A  A   +  + DY ++GDD+ +  +     VA  Y S
Sbjct: 536  PMGALSSFPLLGLVHHAIVQYAAYEA--NSFPFYDYCIVGDDLVLFEEDKAVPVATKYLS 593

Query: 375  VCNDLSITIGLLKSLRSEKNCFEFANRRFYPDGDISPLSIKEELSALTWTGRLEYAKRIL 196
            +C  L I I   K+ +SE   F F +R F    ++SP S+K ELS  T   R+E   R  
Sbjct: 594  MCRYLGIRINKSKTYQSEV-FFNFISRSFLNGIEVSPASMKSELSVHTLGQRVENTLRNC 652

Query: 195  TRFGT-SLKDGSSALLRKASTPAQWKVLGAELSGLRSTTLVDLCRFCLLTP 46
            +R+ T   +   + ++R AS    W  L   LS    T+ V      LL+P
Sbjct: 653  SRWSTGDSRSVMTRIIRFASDHWVWGTLSVSLSQGFLTSYVATVLASLLSP 703


>gb|ALD89128.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
            9]
          Length = 524

 Score =  172 bits (436), Expect = 7e-42
 Identities = 154/507 (30%), Positives = 226/507 (44%), Gaps = 29/507 (5%)
 Frame = -3

Query: 1719 VKNPGTYVQYFIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGNPLKATIPLGHGI 1540
            +++    V+  I F+RH   L K NG   A   LKV   +L   + G+ +K    L   +
Sbjct: 44   IRSTRAKVRCIIVFLRHTYRLFKYNGAKGACLILKVYAVTLQQSIGGHKVKDLTELKFRV 103

Query: 1539 -RLRNGLPAVWDRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHPDFDVS---TIVKPHP 1372
             R   G+P V    LR  IR GD K I            ++ K     VS   TI+ P  
Sbjct: 104  SRTNGGIPRVIPVELRKAIRAGDTKVIRFYLSLFNFYRMIEFKGDMRLVSLTKTIISPAK 163

Query: 1371 DFSQNETFKA---------YQKFCKEVFPTLLTKETGGFKPFRYQSALGYLIRSAGPNLN 1219
            +  +  + K          +Q F K    +L T+         ++ A+ + +  + P   
Sbjct: 164  EGIEIVSLKFDLLRFVSIFFQWFAK--LSSLNTRSLRRELLTAHREAVAFPLLKSSPFTE 221

Query: 1218 GPSMTGIQLDAAAWFNRPDNLI------LDWFTLHGDTKAVNAFSEISKDSHWTQENHPV 1057
            G        D  +     + +I           +H    A+ +  E+    H+     P 
Sbjct: 222  GTQ----NFDGLSKAQLTEEMIKHPVVSTHPLAIHEAANALESNQELVDSVHYFLGLLPD 277

Query: 1056 SRQTLRSFCWASRTPLAWPEETARTSFNDALENVPTGPILGRLHAINEPAGKVRIVAICD 877
                 +++    R  +  P +T   S N         P LG+L    E AGKVR+ A+ D
Sbjct: 278  GSPIRQAY----RLCIRLPGKTGTQSINK--------PFLGKLSLKEESAGKVRVFAMVD 325

Query: 876  YWTQVALKPIHDFLFD-ILKGISSDATFDQSGRVEAYFQRGLSPHWSFDLKAATDSIPLA 700
             WTQ  LKP+HD +FD IL  I  D T DQ   V++   R     +S DL AATD +PL 
Sbjct: 326  PWTQWLLKPLHDTIFDYILASIPQDGTRDQLAPVKSLISRKPKSLFSLDLSAATDRLPLW 385

Query: 699  LYRACLTPLLRQEGEDIETGERRTNLWASILTDRDFLLP--DSSS------VVRYGTGQP 544
            L +A L  ++ QE             WA++L +RD++L   D ++       +RY  GQP
Sbjct: 386  LQKAILAGIMGQE---------YALQWATLLVNRDYVLSLKDQNTDRMVRYPIRYAVGQP 436

Query: 543  MGALSSWASMAIVHHSLVQFSAINAGLETTWYKDYLVLGDDVDIATKTAVADGYQSVCND 364
            MGALSSWA +A+ HH +VQF+A  AG + +W+ +Y +LGDD+ I   T VA  Y  +   
Sbjct: 437  MGALSSWAMLALTHHFIVQFAAYRAGFK-SWFSEYGILGDDIVIG-NTDVAKQYLFIMRV 494

Query: 363  LSITIGLLKSLRS-EKNCFEFANRRFY 286
            L + IGL KSL S      EFA + FY
Sbjct: 495  LGVGIGLHKSLISISGRALEFAKKTFY 521


>gb|ANR02692.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
           9]
          Length = 224

 Score =  159 bits (401), Expect = 3e-40
 Identities = 102/235 (43%), Positives = 132/235 (56%), Gaps = 10/235 (4%)
 Frame = -3

Query: 939 LGRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLFD-ILKGISSDATFDQSGRVEAYFQ 763
           LG+L    E AGKVR+ A+ D WTQ  LKP+HD +FD IL  I  D T DQ   V A   
Sbjct: 1   LGKLSLKEESAGKVRVFAMVDPWTQWLLKPLHDTIFDHILGSIPQDGTRDQLAPVTALMS 60

Query: 762 RGLSPHWSFDLKAATDSIPLALYRACLTPLLRQEGEDIETGERRTNLWASILTDRDFLLP 583
           R     +S DL AATD +PL L +A L  ++ QE             WA++L  RD+ L 
Sbjct: 61  RKPESLFSLDLSAATDRLPLWLQKAILEGIMGQE---------YAQQWATLLVSRDYALS 111

Query: 582 --DSSS------VVRYGTGQPMGALSSWASMAIVHHSLVQFSAINAGLETTWYKDYLVLG 427
             D ++      ++RY  GQPMGALSSWA +A+ HH +VQF+A  AG + +W+ +Y VLG
Sbjct: 112 LKDRNNDRMVRYLIRYAVGQPMGALSSWAMLALTHHFIVQFAAYRAGFK-SWFTEYGVLG 170

Query: 426 DDVDIATKTAVADGYQSVCNDLSITIGLLKSLRS-EKNCFEFANRRFYPDGDISP 265
           DD+ I   T VA  Y  +   L + IGL KSL S      EFA + FY   D+SP
Sbjct: 171 DDIVIG-NTDVARQYLFIMRVLGVGIGLHKSLISISGRALEFAKKTFYMGTDVSP 224


>gb|AHX84133.1| RNA-dependent RNA polymerase [Sclerotinia sclerotiorum mitovirus 6]
          Length = 715

 Score =  171 bits (432), Expect = 3e-40
 Identities = 167/530 (31%), Positives = 234/530 (44%), Gaps = 21/530 (3%)
 Frame = -3

Query: 1689 FIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGNPLKATIPLGHGIRLRNGLPAVW 1510
            F+ F   ++ LL +NG+   V +LK     +  +VSGNP+  T  L   + +  GLP++ 
Sbjct: 51   FMKFAVRVRSLLTHNGRKFTVLYLKECYRIVQHFVSGNPVLVTNELP--LSIVRGLPSII 108

Query: 1509 DRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHP-DFDVSTIVKPHPDFSQNETFKAYQK 1333
               LR R+  GD   I            +  K P D    TIV P    S   T   Y+ 
Sbjct: 109  PGVLRLRMHDGDPGVIRGVLTCLSVFRVI--KFPGDVKFDTIVGPFTGLSS--TLPIYEL 164

Query: 1332 FC-KEVFPTLLTKETGGFKPFRYQSALGYLIRSAGPNLNGPSMTGIQLDAAAWFNRPD-N 1159
               K   P+L     G  +P R+  +     RSAGPN     + GI LD  AW +RP+  
Sbjct: 165  LAVKSSLPSL-----GELRPIRWLFS-----RSAGPNCKVAGL-GIWLDIKAWSSRPNFG 213

Query: 1158 LILDWFTLH--GDTKAVNAFSEISKDSHWTQENHPVSRQTLRSFCWASRTPLAWPEETAR 985
             +LD+  L   G+   +   SE+S                                    
Sbjct: 214  ALLDFIKLFPGGEDFRLELLSEVS------------------------------------ 237

Query: 984  TSFNDALENVPTGPI-LGRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLFDILKGISS 808
                 AL ++P+  + LGRL    E AGKVR+ AI D  TQ  + P+   +FD L+ +  
Sbjct: 238  -----ALRDLPSKALHLGRLSFKEEAAGKVRVFAITDAVTQSVMAPLSAAIFDCLRRVPQ 292

Query: 807  DATFDQSGRVEAYFQRGL------SPHWSFDLKAATDSIPLALYRACLTPLLRQEGEDIE 646
            D TF+QS  ++   Q            +S+DL AATD +P+ L    L+         I 
Sbjct: 293  DGTFNQSAPLDRLRQLKREGKLEDQKFYSYDLSAATDRLPVDLQVQILS---------IY 343

Query: 645  TGERRTNLWASILTDRDFL--------LPDSSSVVRYGTGQPMGALSSWASMAIVHHSLV 490
             GE+   LW S++TDRD+         LP      RY  GQPMGALSSW  +A+ HH +V
Sbjct: 344  LGEQFGTLWRSVMTDRDWSAKVVTVPGLPAEEEQFRYAVGQPMGALSSWGMLALTHHYVV 403

Query: 489  QFSAINAGLETTWYKDYLVLGDDVDIATKTAVADGYQSVCND-LSITIGLLKSLRSEKNC 313
            + +A    L    + DY VLGDDV IA    VA  Y S+  D L + I L K+L SE + 
Sbjct: 404  RLAARRVSLHD--FGDYAVLGDDVVIA-NDLVARSYHSIMVDILGVKINLSKTLVSE-HS 459

Query: 312  FEFANRRFYPDGDISPLSIKEELSALTWTGRLEYAKRILTRFGTSLKDGS 163
            FEFA R    D +++PL     L AL     +    R L+  G +  + S
Sbjct: 460  FEFAKRLVSKDVELTPLGASNALLALQSLNGVPSLLRDLSGKGVTFTEDS 509


>emb|CAJ32468.1| RNA-dependent RNA polymerase [Ophiostoma mitovirus 3b]
          Length = 738

 Score =  170 bits (431), Expect = 5e-40
 Identities = 140/499 (28%), Positives = 217/499 (43%), Gaps = 15/499 (3%)
 Frame = -3

Query: 1710 PGTYVQYFIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGNPLKATIPLGHGIRLR 1531
            P  +  YF   +  +Q L +N+G    V +LK S      ++SGNP   +  +   +R  
Sbjct: 39   PSAHRTYFFELLNRIQSLRRNSGDTWTVGYLKESHRLSSHWLSGNPDVCSGSIRVSVR-- 96

Query: 1530 NGLPAVWDRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHPDFDVSTIVKPHPDFSQNET 1351
             GLP +    LR+ I   +   I            + +  P   +STI  P    ++   
Sbjct: 97   -GLPLIIPGRLRNAIYSRNNINITRALLTLLSTFRVMSAKPKLKLSTITDPFNGVNETLP 155

Query: 1350 FKAYQKFCKEVFP--TLLTKETGGFKPFRYQSALGYLIRSAGPNLNGPSMTGIQLDAAAW 1177
                 +  K +      + K+     P+     +   I  AGPN  G S+  + +DA A 
Sbjct: 156  SLEVSRALKNILQGNKFVFKKEDINDPYSVNRLMD--ITKAGPN-GGVSLRNVIIDAYAL 212

Query: 1176 FNRP---------DNLILDWF--TLHGDTKAVNAFSEISKDSHWTQENHPVSRQTLRSFC 1030
               P          N++  +    L   T  + A ++            P+  + ++ F 
Sbjct: 213  MKHPKVYASLLELSNVMSPYLGLLLRNQTTIIRAITDFD----------PIKWERIKPFM 262

Query: 1029 WASRTPLAWPEETARTSFNDALENVPTGPILGRLHAINEPAGKVRIVAICDYWTQVALKP 850
                          ++  +  L  +P    +G+L    E AGKVR+ A+ D WTQ  L P
Sbjct: 263  ----------APVYQSIKDQTLNLIPDLSCIGKLSTKEEAAGKVRVFAMVDIWTQSILNP 312

Query: 849  IHDFLFDILKGISSDATFDQSGRVEAYFQRGLSPHWSFDLKAATDSIPLALYRACLTPLL 670
            +H  +F I++ + +D TFDQ   ++   +      +SFDL AATD +PL L +  LT L+
Sbjct: 313  LHKKIFSIIRELPTDGTFDQLKPLDRLHELSTQDRFSFDLSAATDRLPLTLQKDILTLLV 372

Query: 669  RQEGEDIETGERRTNLWASILTDRDFLLP--DSSSVVRYGTGQPMGALSSWASMAIVHHS 496
                 +          W + L  R + L    +   + Y  GQPMGALSSW  +A+ HH+
Sbjct: 373  SPSFAE---------AWGTALVGRPYKLKFGTTEDELMYSVGQPMGALSSWGMLALTHHT 423

Query: 495  LVQFSAINAGLETTWYKDYLVLGDDVDIATKTAVADGYQSVCNDLSITIGLLKSLRSEKN 316
            +VQ +A  AG +   + DY +LGDD+ IA K AVAD Y  + +DL + I L KSL S   
Sbjct: 424  IVQVAASRAGYKDL-FLDYALLGDDICIANK-AVADNYLLIMHDLGVEINLSKSLISSTG 481

Query: 315  CFEFANRRFYPDGDISPLS 259
              EFA R      D+SP S
Sbjct: 482  VVEFAKRWRVGQTDVSPAS 500


>emb|CEZ26300.1| RNA dependent RNA polymerase [Botrytis cinerea mitovirus 1]
          Length = 738

 Score =  170 bits (430), Expect = 7e-40
 Identities = 146/493 (29%), Positives = 219/493 (44%), Gaps = 9/493 (1%)
 Frame = -3

Query: 1710 PGTYVQYFIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGNPLKATIPLGHGIRLR 1531
            P  +  YF   +  +Q L +N+G    V +LK S      ++SGNP   +  +   +R  
Sbjct: 39   PSAHRTYFFELLNRIQSLRRNSGDTWTVGYLKESHRLSSHWLSGNPDVCSGSIRVSVR-- 96

Query: 1530 NGLPAVWDRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHPDFDVSTIVKPHPDFSQNET 1351
             GLP +    LR+ +       I            + +  P   + TI  P      NET
Sbjct: 97   -GLPLIIPGRLRNAVYSRRNINITRALLTLLSTFRVMSATPKLKLGTITDPFNGV--NET 153

Query: 1350 FKAYQKFCKEVFPTLLTKETGGFK------PFRYQSALGYLIRSAGPNLNGPSMTGIQLD 1189
              + +         +L      FK      P+     +   I  AGPN  G S+  + +D
Sbjct: 154  LPSLE--VSRALKNILQGNKFTFKNEDIKDPYSVNRLMD--ITKAGPN-GGVSLRNVIID 208

Query: 1188 AAAWFNRPDNLILDWFTLHGDTKAVNAFSEISKDSHWTQENHPVSRQTLRSFCWASRTPL 1009
            A A    P      + +L   +K ++ +  +   +  T     +    ++   W    P 
Sbjct: 209  AYALMKHPKV----YASLLELSKVMSPYLGLLLRNQTTIIRAIIDYDPIK---WERIKPF 261

Query: 1008 AWPEETARTSFND-ALENVPTGPILGRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLF 832
              P      S  D +L+ +P    +G+L    E AGKVR+ A+ D WTQ  L P+H  +F
Sbjct: 262  MAP---VYQSIKDRSLKLMPDLSCIGKLSTKEEAAGKVRVFAMVDIWTQSILNPLHKKIF 318

Query: 831  DILKGISSDATFDQSGRVEAYFQRGLSPHWSFDLKAATDSIPLALYRACLTPLLRQEGED 652
             I++ + +D TFDQ   ++   +      +SFDL AATD +PLAL +  LT L+     +
Sbjct: 319  SIIRELPTDGTFDQLKPLDRLHELSTQDRFSFDLSAATDRLPLALQKDILTLLVSPSFAE 378

Query: 651  IETGERRTNLWASILTDRDFLLP--DSSSVVRYGTGQPMGALSSWASMAIVHHSLVQFSA 478
                      W + LT R + L    +   + Y  GQPMGALSSW  +A+ HH++VQ +A
Sbjct: 379  ---------AWGTALTGRPYKLKFGTTEDELMYAVGQPMGALSSWGMLALTHHTIVQVAA 429

Query: 477  INAGLETTWYKDYLVLGDDVDIATKTAVADGYQSVCNDLSITIGLLKSLRSEKNCFEFAN 298
              AG +   + DY +LGDD+ IA K AVAD Y  +  DL + I L KSL S     EFA 
Sbjct: 430  SRAGYKDL-FLDYALLGDDICIANK-AVADNYLLIMRDLGVEINLSKSLISSTGVVEFAK 487

Query: 297  RRFYPDGDISPLS 259
            R      D+SP S
Sbjct: 488  RWRVGQTDVSPAS 500


>gb|ALD89100.1| RNA-dependent RNA polymerase [Macrophomina phaseolina mitovirus 1]
          Length = 715

 Score =  168 bits (425), Expect = 2e-39
 Identities = 167/532 (31%), Positives = 233/532 (43%), Gaps = 23/532 (4%)
 Frame = -3

Query: 1689 FIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGNPLKAT--IPLGHGIRLRNGLPA 1516
            F+ F   ++ LL +NG+   V +LK     +  +VSGNP+  T  +PL     +  GLP+
Sbjct: 51   FMKFAVRVRSLLTHNGRKFTVLYLKECYRIVQHFVSGNPVLVTNEVPLS----IVRGLPS 106

Query: 1515 VWDRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHP-DFDVSTIVKPHPDFSQNETFKAY 1339
            +    LR R+  GD   I            +  K P D    TIV P    S   T   Y
Sbjct: 107  IIPGVLRLRMHDGDPGVIRGVLTCLSVFRVI--KFPGDVKFDTIVGPFTGLSS--TLPIY 162

Query: 1338 QKFC-KEVFPTLLTKETGGFKPFRYQSALGYLIRSAGPNLNGPSMTGIQLDAAAWFNRPD 1162
            +    K   P L     G  +P R+  +     RSAGPN     + GI LD  AW +RP+
Sbjct: 163  ELLAVKSSLPPL-----GELRPIRWLFS-----RSAGPNCKVAGL-GIWLDIKAWSSRPN 211

Query: 1161 -NLILDWFTLH--GDTKAVNAFSEISKDSHWTQENHPVSRQTLRSFCWASRTPLAWPEET 991
               +LD+  L   G+   +   SE+S                                  
Sbjct: 212  FGALLDFIKLFPGGEDFRLGLLSEVS---------------------------------- 237

Query: 990  ARTSFNDALENVPTGPI-LGRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLFDILKGI 814
                    L ++P+  + LGRL    E AGKVR+ AI D  TQ  + P+   +FD L+ +
Sbjct: 238  -------VLRDLPSKVLHLGRLSFKEEAAGKVRVFAITDAVTQSVMAPLSAAIFDCLRRV 290

Query: 813  SSDATFDQSGRVEAYFQRGL------SPHWSFDLKAATDSIPLALYRACLTPLLRQEGED 652
              D TF+QS  ++   Q            +S+DL AATD +P+ L    L+         
Sbjct: 291  PQDGTFNQSAPLDRLRQLKREGKLEGQKFYSYDLSAATDRLPVDLQVQILS--------- 341

Query: 651  IETGERRTNLWASILTDRDFL--------LPDSSSVVRYGTGQPMGALSSWASMAIVHHS 496
            I  GE+   LW S++TDRD+         LP      RY  GQPMGALSSW  +A+ HH 
Sbjct: 342  IYFGEQFGTLWRSVMTDRDWSAKVVTVPGLPAEEEQFRYAVGQPMGALSSWGMLALTHHY 401

Query: 495  LVQFSAINAGLETTWYKDYLVLGDDVDIATKTAVADGYQSVCND-LSITIGLLKSLRSEK 319
            +V+ +A    L    + DY VLGDDV IA    VA  Y S+  D L + I L K+L SE 
Sbjct: 402  VVRLAARRVSLHD--FGDYAVLGDDVVIA-NDLVARSYHSIMVDILGVKINLSKTLVSE- 457

Query: 318  NCFEFANRRFYPDGDISPLSIKEELSALTWTGRLEYAKRILTRFGTSLKDGS 163
            + FEFA R    D +++PL     L AL     +    R L+  G +  + S
Sbjct: 458  HSFEFAKRLVSKDVELTPLGASNALLALQSLNGIPSILRDLSGKGVTFTEDS 509


>gb|AHF48630.1| RNA-dependent RNA polymerase [Sclerotinia sclerotiorum mitovirus 14]
          Length = 715

 Score =  168 bits (425), Expect = 2e-39
 Identities = 166/530 (31%), Positives = 232/530 (43%), Gaps = 21/530 (3%)
 Frame = -3

Query: 1689 FIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGNPLKATIPLGHGIRLRNGLPAVW 1510
            F+ F   ++ LL +NG+   V +LK     +  +VSGNP+  T  L   + +  GLP++ 
Sbjct: 51   FMKFAVRVRSLLTHNGRKFTVLYLKECYRIVQHFVSGNPVLVTNELP--LSIVRGLPSII 108

Query: 1509 DRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHP-DFDVSTIVKPHPDFSQNETFKAYQK 1333
               LR R+  GD   I            +  K P D    TIV P    S   T   Y+ 
Sbjct: 109  PGVLRLRMHDGDPGVIRGVLTCLSVFRVI--KFPGDVKFDTIVGPFTGLSS--TLPIYEL 164

Query: 1332 FC-KEVFPTLLTKETGGFKPFRYQSALGYLIRSAGPNLNGPSMTGIQLDAAAWFNRPD-N 1159
               K   P L     G  +P R+  +     RSAGPN     + GI LD  AW +RP+  
Sbjct: 165  LTIKSSLPPL-----GELRPIRWLFS-----RSAGPNCKVAGL-GIWLDIKAWSSRPNFG 213

Query: 1158 LILDWFTLH--GDTKAVNAFSEISKDSHWTQENHPVSRQTLRSFCWASRTPLAWPEETAR 985
             +LD+  L   G+   +   SE+S                                    
Sbjct: 214  ALLDFIKLFPGGEDFRLGLLSEVS------------------------------------ 237

Query: 984  TSFNDALENVPTGPI-LGRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLFDILKGISS 808
                  L ++P+  + LGRL    E AGKVR+ AI D  TQ  + P+   +FD L+ +  
Sbjct: 238  -----VLRDLPSKVLHLGRLSFKEEAAGKVRVFAITDAVTQSVMAPLSXAIFDCLRRVPQ 292

Query: 807  DATFDQSGRVEAYFQRGL------SPHWSFDLKAATDSIPLALYRACLTPLLRQEGEDIE 646
            D TF+QS  ++   Q            +S+DL AATD +P+ L    L+         I 
Sbjct: 293  DGTFNQSAPLDRLRQLKREGKLEGQKFYSYDLSAATDRLPVDLQVQILS---------IY 343

Query: 645  TGERRTNLWASILTDRDFL--------LPDSSSVVRYGTGQPMGALSSWASMAIVHHSLV 490
             GE+   LW S++TDRD+         LP      RY  GQPMGALSSW  +A+ HH +V
Sbjct: 344  LGEQFGTLWRSVMTDRDWSAKVVTVPGLPAEEEQFRYAVGQPMGALSSWGMLALTHHYVV 403

Query: 489  QFSAINAGLETTWYKDYLVLGDDVDIATKTAVADGYQSVCND-LSITIGLLKSLRSEKNC 313
            + +A    L    + DY VLGDDV IA    VA  Y S+  D L + I L K+L SE + 
Sbjct: 404  RLAARRVSLHD--FGDYAVLGDDVVIA-NDLVARSYHSIMVDILGVKINLSKTLVSE-HS 459

Query: 312  FEFANRRFYPDGDISPLSIKEELSALTWTGRLEYAKRILTRFGTSLKDGS 163
            FEFA R    D +++PL     L AL     +    R L+  G +  + S
Sbjct: 460  FEFAKRLVSKDVELTPLGASNALLALQSLNGVPSLLRDLSGKGVTFTEDS 509


>gb|AVA17449.1| RNA-dependent RNA polymerase [Gigaspora margarita mitovirus 1]
          Length = 794

 Score =  168 bits (425), Expect = 4e-39
 Identities = 100/228 (43%), Positives = 131/228 (57%), Gaps = 5/228 (2%)
 Frame = -3

Query: 936 GRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLFDILKGISSDATFDQSGRV-EAYFQR 760
           GR+   +EPAGKVR  A+ DYWTQ +LKP+HD LF ILK I  D TFDQ     E    R
Sbjct: 286 GRISFKDEPAGKVRAFAMVDYWTQCSLKPLHDLLFSILKEIPQDGTFDQMAPAKELLSVR 345

Query: 759 GLSPH--WSFDLKAATDSIPLALYRACLTPLLRQEGEDIETGERRTNLWASILTDRDFLL 586
            L+    WS DL AATD  PLAL +  +  L+ +E             WA+++ DR F L
Sbjct: 346 RLATETWWSLDLSAATDRFPLALQKLAMKYLVSEE---------YAAAWATLMVDRPFRL 396

Query: 585 PDSSSV--VRYGTGQPMGALSSWASMAIVHHSLVQFSAINAGLETTWYKDYLVLGDDVDI 412
           P        RY  GQPMGA SSWA+ A+ HH+ VQF+A  +GL + W++DY +LGDD+ I
Sbjct: 397 PVGYKPRDCRYAVGQPMGAYSSWAAFALTHHATVQFAARLSGL-SGWFRDYALLGDDIII 455

Query: 411 ATKTAVADGYQSVCNDLSITIGLLKSLRSEKNCFEFANRRFYPDGDIS 268
           A    VA  Y+ + + L +   L KS+ S +  FEFA R  +   D+S
Sbjct: 456 A-NDRVAHKYRWLLSQLGVECSLAKSMASNQRTFEFAKRVLFRGVDVS 502


>emb|CEZ26296.1| RNA dependent RNA polymerase [Botrytis cinerea mitovirus 1]
          Length = 738

 Score =  166 bits (420), Expect = 1e-38
 Identities = 139/489 (28%), Positives = 216/489 (44%), Gaps = 5/489 (1%)
 Frame = -3

Query: 1710 PGTYVQYFIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGNPLKATIPLGHGIRLR 1531
            P  +  YF   +  +Q L +N+G    V +LK S      ++SGNP   +  +   +R  
Sbjct: 39   PSAHRTYFFELLNRIQSLRRNSGDTWTVGYLKESHRLSSHWLSGNPDVCSGSIRVSVR-- 96

Query: 1530 NGLPAVWDRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHPDFDVSTIVKPHPDFSQNET 1351
             GLP +    LR+ +   +   I            + +  P   + TI  P    ++   
Sbjct: 97   -GLPLIIPGRLRNAVYSRNNINITRALLTLLSTFRVMSATPKLKLGTITDPFNGVNETLP 155

Query: 1350 FKAYQKFCKEVFP--TLLTKETGGFKPFRYQSALGYLIRSAGPNLNGPSMTGIQLDAAAW 1177
                 +  K +      + K+     P+     +   I  AGPN  G S+  + +DA A 
Sbjct: 156  SLEVSRALKNILQGNKFIFKKEDIKDPYSVNRLMD--ITKAGPN-GGVSLRNVIIDAYAL 212

Query: 1176 FNRPDNLILDWFTLHGDTKAVNAFSEISKDSHWTQENHPVSRQTLRSFCWASRTPLAWPE 997
               P      + +L   +  ++ +  +   +  T     +    ++   W    P   P 
Sbjct: 213  MKHPKV----YTSLLELSNVMSPYLGLLLRNQTTIIRAIIDYDPIK---WERIKPFMAP- 264

Query: 996  ETARTSFND-ALENVPTGPILGRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLFDILK 820
                 S  D +L+ +P    +G+L    E AGKVR+ A+ D WTQ  L P+H  +F I++
Sbjct: 265  --VYQSIKDRSLKLMPDLSCIGKLSTKEEAAGKVRVFAMVDIWTQSILNPLHKKIFSIIR 322

Query: 819  GISSDATFDQSGRVEAYFQRGLSPHWSFDLKAATDSIPLALYRACLTPLLRQEGEDIETG 640
             + +D TFDQ   ++   +      +SFDL AATD +PL L +  LT L+     +    
Sbjct: 323  ELPTDGTFDQLKPLDRLHELSTQDRFSFDLSAATDRLPLTLQKDILTLLVSPSFAE---- 378

Query: 639  ERRTNLWASILTDRDFLLP--DSSSVVRYGTGQPMGALSSWASMAIVHHSLVQFSAINAG 466
                  W + L  R + L    +   + Y  GQPMGALSSW  +A+ HH++VQ +A  AG
Sbjct: 379  -----AWGTALVGRPYKLKFGTTEDELMYSVGQPMGALSSWGMLALTHHTIVQVAASRAG 433

Query: 465  LETTWYKDYLVLGDDVDIATKTAVADGYQSVCNDLSITIGLLKSLRSEKNCFEFANRRFY 286
             +   + DY +LGDD+ IA K AVAD Y  +  DL + I L KSL S     EFA R   
Sbjct: 434  YKDL-FLDYALLGDDICIANK-AVADNYLLIMRDLGVEINLSKSLISSTGVVEFAKRWRV 491

Query: 285  PDGDISPLS 259
               D+SP S
Sbjct: 492  GQTDVSPAS 500


>gb|ALD89126.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
            7]
          Length = 871

 Score =  165 bits (417), Expect = 6e-38
 Identities = 158/529 (29%), Positives = 222/529 (41%), Gaps = 18/529 (3%)
 Frame = -3

Query: 1767 GRTVYAWVRTLAHYAEVKNPGTYVQYFIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSY 1588
            GR +  +   +     ++     V+  + F++   +L +NNG   A   LKV    L   
Sbjct: 8    GRALVRYFVRMLPITGLQTTSARVRAIVVFLKLTSILFRNNGAKGACLILKVHAVILQQA 67

Query: 1587 VSGNPLKATIPLGHGI-RLRNGLPAVWDRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKH 1411
              G+ +K    L   + R   GLP       R+ IR G ++ I            ++   
Sbjct: 68   CGGHIVKDLTELKFRVSRTNRGLPRAIPVQHRELIRSGHLETIRLWLTLFNLYRVIEFDG 127

Query: 1410 PDFDVS----TIVKPHPDFSQNETFKAYQKFCKEVFPTLLTKETG-GFKPFRYQSALGYL 1246
             D+ +S    TI  P    +     KA       +F   LT + G   +         Y 
Sbjct: 128  -DYRLSSLSKTITSPAKTLAGFVQLKAELLAFVPLFFKALTTQIGLNVRSINRVLMEEYE 186

Query: 1245 IRSAGPNLNGPSMTGIQLDAAAWFNRPDNLILDWFTLHGDTKAVNAFSEISKDSHWTQEN 1066
            +  A P L     T   L      +R + L     T    T  + A  E +   H   E 
Sbjct: 187  LAKAVPLLKSSPFT-YPLHKLEDLSRSEQLEFMEKTPVSSTHPI-AVHEAANALHNNAEL 244

Query: 1065 HPVSRQTLRSFCWASRTPLAWPEETARTSFNDALENVPTGPILGRLHAINEPAGKVRIVA 886
               +   L          LAW E                 P +G+L    E AGKVR+ A
Sbjct: 245  AEAASYFLGLLPSNCDLRLAWRECIRVPLVKGTGTQKSFTPTVGKLSLKAESAGKVRVFA 304

Query: 885  ICDYWTQVALKPIHDFLFD-ILKGISSDATFDQSGRVEAYFQRGLSPHWSFDLKAATDSI 709
            + D WTQ  LKP+HD +F  IL GI  D T DQ   V A  ++  S  +S DL AATD +
Sbjct: 305  MVDCWTQWLLKPMHDSIFHHILPGIPQDGTLDQLKPVHALLRKDPSSLFSLDLSAATDRL 364

Query: 708  PLALYRACLTPLLRQEGEDIETGERRTNLWASILTDRDFLLPDSSS--------VVRYGT 553
            PL L  A +             GE     WA  L +RD++L  S           +RY  
Sbjct: 365  PLWLQEAIVAAF---------AGEVFARHWAEFLVNRDYVLTLSDKNTDTPVRYKLRYAV 415

Query: 552  GQPMGALSSWASMAIVHHSLVQFSAINAGLETT--WYKDYLVLGDDVDIATKTAVADGYQ 379
            GQPMGA SSWA +A+ HH +VQF A++AG+  +  W++DY +LGDD+ I   + VA  Y 
Sbjct: 416  GQPMGAYSSWAMLALTHHFIVQFCAVSAGVVRSGLWFEDYAILGDDIVIG-NSRVAKAYI 474

Query: 378  SVCNDLSITIGLLKSLRSE-KNCFEFANRRFYPDGDISPLSIKEELSAL 235
             V   L + IGL KSL S      EFA R F    D+SP+ I E +++L
Sbjct: 475  RVMATLGVGIGLHKSLISAGGTALEFAKRTFVHGKDVSPVPITEWIASL 523


>ref|YP_002284334.2| RNA-dependent RNA polymerase [Botrytis cinerea mitovirus 1]
 gb|ABQ65153.3| RNA-dependent RNA polymerase [Botrytis cinerea mitovirus 1]
          Length = 738

 Score =  162 bits (411), Expect = 2e-37
 Identities = 146/503 (29%), Positives = 217/503 (43%), Gaps = 19/503 (3%)
 Frame = -3

Query: 1710 PGTYVQYFIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGNPLKATIPLGHGIRLR 1531
            P  +  YF   +  +Q L +N+G    V +LK S      ++SGNP   +  +   +R  
Sbjct: 39   PSAHRTYFFELLNRIQSLRRNSGDTWTVGYLKESHRLSSHWLSGNPDVCSGSIRVSVR-- 96

Query: 1530 NGLPAVWDRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHPDFDVSTIVKPHPDFSQNET 1351
             GLP +    LR+ I   +   I            + +  P   +STI  P      NET
Sbjct: 97   -GLPLIIPGRLRNVIYSRNNINITRALLTLLSTFRVMSATPKLKLSTITDPFNGV--NET 153

Query: 1350 FKAYQKFCKEVFPTLLTKETGGFK------PFRYQSALGYLIRSAGPNLNGPSMTGIQLD 1189
              + +         +L      FK      P+     +   I  A PN  G S+  + +D
Sbjct: 154  LPSLE--VSRALKNILQGNKFHFKKEDIKDPYSVNRLMD--ITKADPN-GGVSLRNVIID 208

Query: 1188 AAAWFNRP---------DNLILDWF--TLHGDTKAVNAFSEISKDSHWTQENHPVSRQTL 1042
            A A    P          N++  +    L   T  + A  +            P+  + +
Sbjct: 209  AYALMKHPKVYASLLELSNVMSPYLGSLLRNQTTIIRAIIDYD----------PIEWERI 258

Query: 1041 RSFCWASRTPLAWPEETARTSFNDALENVPTGPILGRLHAINEPAGKVRIVAICDYWTQV 862
            + F      P+ +     RT     L+ VP    +G+L    E AGKVR+ A+ D WTQ 
Sbjct: 259  KPFM----API-YQNIKDRT-----LKLVPDLSCIGKLSTKEEAAGKVRVFAMVDIWTQS 308

Query: 861  ALKPIHDFLFDILKGISSDATFDQSGRVEAYFQRGLSPHWSFDLKAATDSIPLALYRACL 682
             L P+H  +F I++ + +D TFDQ   ++   +      +SFDL AATD +PL L +  L
Sbjct: 309  ILNPLHKKIFSIIRELPTDGTFDQLKPLDRLHELSTQDRFSFDLSAATDRLPLTLQKDIL 368

Query: 681  TPLLRQEGEDIETGERRTNLWASILTDRDF--LLPDSSSVVRYGTGQPMGALSSWASMAI 508
            T L+     +          W + L  R +      +   + Y  GQPMGALSSW  +A+
Sbjct: 369  TLLVSPSFAE---------AWGTALVGRPYKWKFGTTEDELMYSVGQPMGALSSWGMLAL 419

Query: 507  VHHSLVQFSAINAGLETTWYKDYLVLGDDVDIATKTAVADGYQSVCNDLSITIGLLKSLR 328
             HH++VQ +A  AG +   + DY +LGDD+ IA K AVAD Y  +  DL + I L KSL 
Sbjct: 420  THHTIVQVAASRAGYKDL-FLDYALLGDDICIANK-AVADNYLLIMRDLGVEINLSKSLI 477

Query: 327  SEKNCFEFANRRFYPDGDISPLS 259
            S     EFA R      D+SP S
Sbjct: 478  SSTGVVEFAKRWRVGQTDVSPAS 500


>gb|AGC24232.1| RNA-dependent RNA polymerase [Sclerotinia sclerotiorum mitovirus 3]
          Length = 712

 Score =  162 bits (410), Expect = 2e-37
 Identities = 156/509 (30%), Positives = 225/509 (44%), Gaps = 12/509 (2%)
 Frame = -3

Query: 1755 YAWVRTLAHYAEVKNPGTYVQYFIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGN 1576
            Y +VR L     +  P      F+ F   ++ L  +NG +  VK+LK  L     +VSGN
Sbjct: 37   YPYVRLLIWSLRLDKPS-----FMKFATRIESLWIHNGLIFTVKYLKECLRICQHFVSGN 91

Query: 1575 PLKATIPLGHGIRLRNGLPAVWDRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHPD-FD 1399
            P+  T  +   I +  G+P +   NLR  +   D+  I            +  K P    
Sbjct: 92   PVLVTTEMP--ISIVRGIPTIIPGNLRLLMHSRDLSVIRGVLSLLSVFRIM--KIPSTLK 147

Query: 1398 VSTIVKPHPDFSQNETFKAYQKF-CKEVFPTLLTKETGGFKPFRYQSALGYLIRSAGPNL 1222
            + +I  P      + T   Y+    K+V P          KP + +     L+RSAGPN 
Sbjct: 148  LESITGPFTGL--DSTLPKYELIKIKQVLPVFPQ-----IKPIKLK-----LLRSAGPNC 195

Query: 1221 NGPSMTGIQLDAAAWFNRPDNLILDWFTLHGDTKAVNAFSEISKDSHWTQENHPVSRQTL 1042
               SM GI LD  AW   P+  +L  F        +  F            N+   R  L
Sbjct: 196  K-VSMLGIWLDIKAWSQHPNFKVLIEF--------IQLFP-----------NYQDFRDML 235

Query: 1041 RSFCWASRTPLAWPEETARTSFNDALENVPTGPI-LGRLHAINEPAGKVRIVAICDYWTQ 865
                +  R                   ++P+  + LG+L    E AGK R+ AI D  TQ
Sbjct: 236  LQEAYNLRL------------------SIPSKDLHLGKLAIKEEAAGKARVFAITDSITQ 277

Query: 864  VALKPIHDFLFDILKGISSDATFDQSGRVEAYFQR---GLSPH-----WSFDLKAATDSI 709
              + PI D +F +L+ I  D TF+QS  ++   Q    G  P      +S+DL AATD +
Sbjct: 278  SVMGPISDAIFKMLRQIPMDGTFNQSAPLDRLVQLSKDGAIPEKDRVFYSYDLSAATDRL 337

Query: 708  PLALYRACLTPLLRQEGEDIETGERRTNLWASILTDRDFLLPDSSSVVRYGTGQPMGALS 529
            P+ L +  L+         I  GE     W+ ++TDRD+ L      +RY  GQPMGALS
Sbjct: 338  PINLQKDILS---------IYCGESFALKWSILMTDRDWYLTKEKRNLRYSVGQPMGALS 388

Query: 528  SWASMAIVHHSLVQFSAINAGLETTWYKDYLVLGDDVDIATKTAVADGYQSVCND-LSIT 352
            SWA +A+ HH +V  +A   G     +  Y +LGDD+ IA K +VAD Y  +  + L + 
Sbjct: 389  SWAMLALTHHFIVGLAANRVG--KLGFDHYALLGDDIVIADK-SVADSYYMIMTEILGVQ 445

Query: 351  IGLLKSLRSEKNCFEFANRRFYPDGDISP 265
            I L KSL S  N FEFA R    +G+++P
Sbjct: 446  INLSKSLVS-TNSFEFAKRLVTLEGEVTP 473


>ref|YP_009182164.1| RNA dependent RNA polymerase [Sclerotinia sclerotiorum mitovirus 3]
 emb|CEZ26305.1| RNA dependent RNA polymerase [Sclerotinia sclerotiorum mitovirus 3]
          Length = 711

 Score =  162 bits (409), Expect = 2e-37
 Identities = 153/509 (30%), Positives = 226/509 (44%), Gaps = 12/509 (2%)
 Frame = -3

Query: 1755 YAWVRTLAHYAEVKNPGTYVQYFIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGN 1576
            Y +VR L     +  P      F+ F   ++ L  +NG +  VK+LK  L     +VSGN
Sbjct: 36   YPYVRLLIWSLRLDKPS-----FMKFATRIESLWIHNGLIFTVKYLKECLRICQHFVSGN 90

Query: 1575 PLKATIPLGHGIRLRNGLPAVWDRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHPD-FD 1399
            P+  T  +   I +  G+P +   ++R ++   D+  I            +  K P    
Sbjct: 91   PVLVTTEMP--ISIVRGIPTIIPGSIRLQMHSRDLSVIRGVLSLLSVFRIM--KIPSTLK 146

Query: 1398 VSTIVKPHPDFSQNETFKAYQKF-CKEVFPTLLTKETGGFKPFRYQSALGYLIRSAGPNL 1222
            + +I  P      + T   Y+    K+V P          KP R +     L+RSAGPN 
Sbjct: 147  LESITGPFTGL--DSTLPKYELIKIKQVLPVFPQ-----IKPIRLK-----LLRSAGPNC 194

Query: 1221 NGPSMTGIQLDAAAWFNRPDNLILDWFTLHGDTKAVNAFSEISKDSHWTQENHPVSRQTL 1042
               SM GI LD  AW            + H + K +  F ++         N+   R  L
Sbjct: 195  K-VSMLGIWLDIKAW------------SQHSNFKTLIEFIQLFP-------NYVEFRDML 234

Query: 1041 RSFCWASRTPLAWPEETARTSFNDALENVPTGPI-LGRLHAINEPAGKVRIVAICDYWTQ 865
                +  R                   +VP+  + LG+L    E AGK R+ AI D  TQ
Sbjct: 235  LQEAYNLRL------------------SVPSKDLHLGKLAIKEEAAGKARVFAITDSITQ 276

Query: 864  VALKPIHDFLFDILKGISSDATFDQSGRVEAYFQRGLSP--------HWSFDLKAATDSI 709
              + PI D +F +L+ I  D TF+QS  ++   Q              +S+DL AATD +
Sbjct: 277  SVMGPISDAIFKMLRQIPMDGTFNQSAPLDRLVQLSKDGAIAEKDRIFYSYDLSAATDRL 336

Query: 708  PLALYRACLTPLLRQEGEDIETGERRTNLWASILTDRDFLLPDSSSVVRYGTGQPMGALS 529
            P+ L +  L+         I  GE   + W+ ++TDRD+ L      +RY  GQPMGALS
Sbjct: 337  PINLQKDILS---------IYCGESFASKWSILMTDRDWYLTKEKRNLRYSVGQPMGALS 387

Query: 528  SWASMAIVHHSLVQFSAINAGLETTWYKDYLVLGDDVDIATKTAVADGYQSVCND-LSIT 352
            SWA +A+ HH +V  +A   G     +  Y +LGDD+ IA K +VAD Y  +  + L + 
Sbjct: 388  SWAMLALTHHFIVGMAANRVG--KLGFNHYALLGDDIVIADK-SVADSYYMIMTEILGVQ 444

Query: 351  IGLLKSLRSEKNCFEFANRRFYPDGDISP 265
            I L KSL S  N FEFA R    +G+++P
Sbjct: 445  INLSKSLVS-TNSFEFAKRLVTLEGEVTP 472


>ref|YP_009272901.1| RNA-dependent RNA polymerase [Fusarium poae mitovirus 4]
 dbj|BAV56292.1| RNA-dependent RNA polymerase [Fusarium poae mitovirus 4]
          Length = 689

 Score =  161 bits (408), Expect = 2e-37
 Identities = 119/344 (34%), Positives = 165/344 (47%), Gaps = 4/344 (1%)
 Frame = -3

Query: 1131 GDTKAVNAFSEISKDSHWTQENHPVSRQTLRSFCWASRTPL-AWPEETARTSFNDALENV 955
            G T    AFSE S+   + +    V+  +L S        L +W    + T   + L   
Sbjct: 198  GATLDAKAFSEDSRLLSYAETVSAVTAPSLFSLLKEEINNLGSW----SSTMKEELLSKY 253

Query: 954  PTGPILGRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLFDILKGISSDATFDQSGRVE 775
                 LG+L    E AGKVR+ AI D WTQ  L P+H  +F  LK I  D TFDQ   + 
Sbjct: 254  TRDLKLGKLSEKKEAAGKVRVFAITDVWTQSFLSPLHHAIFGFLKRIPMDGTFDQLKPLN 313

Query: 774  AYFQRGLSPHWSFDLKAATDSIPLALYRACLTPLLRQEGEDIETGERRTNLWASILTDRD 595
            A   RGL   +S+DL AATD +P+ L    L+ L          GE     W  +L +R 
Sbjct: 314  ALLSRGLKNFYSYDLSAATDRLPITLQEQILSRLF---------GESFAKAWKGLLVERP 364

Query: 594  FLLPDSSSVVRYGTGQPMGALSSWASMAIVHHSLVQFSAINAGLETTWYKDYLVLGDDVD 415
            +          Y  GQPMGALSSW  +A+ HH +VQ +A   G   T ++DY +LGDD+ 
Sbjct: 365  WY--HKGIPYLYSVGQPMGALSSWGMLALTHHMIVQVAASRVG-HRTMFRDYALLGDDIC 421

Query: 414  IATKTAVADGYQSVCNDLSITIGLLKSLRSEKNCFEFANRRFYPDGDISPLSIKEELSAL 235
            IA  +AVA  Y S+  D  + I L KSL S+    EFA R    + D+SPL  K     +
Sbjct: 422  IA-DSAVAKSYLSLMTDYGVDINLSKSLESDIGVAEFAKRLIKDETDLSPLPPKLITLLM 480

Query: 234  TWTGRLEYAKRILTRFGTSLKDGSSALLR---KASTPAQWKVLG 112
            +    L    R +   G S++    +LL+   + S P  W+++G
Sbjct: 481  SQFKALPTLVRDMIGRGLSVE----SLLKDETRVSRPILWELIG 520


>gb|AHX84134.1| RNA-dependent RNA polymerase [Sclerotinia sclerotiorum mitovirus 6]
          Length = 742

 Score =  162 bits (409), Expect = 3e-37
 Identities = 165/530 (31%), Positives = 230/530 (43%), Gaps = 21/530 (3%)
 Frame = -3

Query: 1689 FIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGNPLKATIPLGHGIRLRNGLPAVW 1510
            F+ F   ++ LL +NG+   V +LK     +  +VSGNP+  T  L   + +  GLP++ 
Sbjct: 78   FMKFAVRVRSLLTHNGRKFTVLYLKECYRIVQHFVSGNPVFVTNELP--LSIVRGLPSII 135

Query: 1509 DRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHP-DFDVSTIVKPHPDFSQNETFKAYQK 1333
               LR R+  GD   I            +  K P D    TIV      S   T   Y+ 
Sbjct: 136  PGVLRLRMHDGDPGVIRGVLTCLSVFRVI--KFPGDVKFDTIVGSFTGLSS--TLPIYEL 191

Query: 1332 FC-KEVFPTLLTKETGGFKPFRYQSALGYLIRSAGPNLNGPSMTGIQLDAAAWFNRPD-N 1159
               K   P L     G  +P R+  +     RSAGPN     + GI LD  AW +RP+  
Sbjct: 192  LAVKSSLPPL-----GELRPIRWLFS-----RSAGPNCKVAGL-GIWLDIKAWSSRPNFG 240

Query: 1158 LILDWFTLH--GDTKAVNAFSEISKDSHWTQENHPVSRQTLRSFCWASRTPLAWPEETAR 985
             +LD+      G+   +   SE+S                                    
Sbjct: 241  NLLDFIKYFPGGEDFRLELLSEVS------------------------------------ 264

Query: 984  TSFNDALENVPTGPI-LGRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLFDILKGISS 808
                 AL ++P+  + LGRL    E AGKVR+ AI D  TQ  + P+   +FD L+ I  
Sbjct: 265  -----ALRDLPSKVLHLGRLSFKEEAAGKVRVFAITDAVTQSVMAPLSTAIFDCLRRIPQ 319

Query: 807  DATFDQSGRVEAYFQRGL------SPHWSFDLKAATDSIPLALYRACLTPLLRQEGEDIE 646
            D TF+QS  ++   Q            +S+DL AATD +P+ L    L+         I 
Sbjct: 320  DGTFNQSAPLDRLRQLKREGKLEGQKFYSYDLSAATDRLPVDLQVQILS---------IY 370

Query: 645  TGERRTNLWASILTDRDFL--------LPDSSSVVRYGTGQPMGALSSWASMAIVHHSLV 490
             GE+   LW S++TDRD+         LP      RY  GQPMGALSSW  +A+ HH +V
Sbjct: 371  FGEQFGTLWKSVMTDRDWSAKVVTVPGLPAEEEQFRYTVGQPMGALSSWGMLALTHHYIV 430

Query: 489  QFSAINAGLETTWYKDYLVLGDDVDIATKTAVADGYQSVCND-LSITIGLLKSLRSEKNC 313
            + +A    L    + DY VLGDDV IA    VA  Y  +  D L + I L K+L SE + 
Sbjct: 431  RLAARRVSLHD--FGDYAVLGDDVVIA-NDLVARSYHGIMVDILGVKINLSKTLVSE-HS 486

Query: 312  FEFANRRFYPDGDISPLSIKEELSALTWTGRLEYAKRILTRFGTSLKDGS 163
            FEFA R    D +++PL     L AL     +    R L+  G +  + S
Sbjct: 487  FEFAKRLVSKDVELTPLGASNALLALQSLNGVPSLLRDLSGKGVTFTEDS 536


>gb|ANJ77670.1| RNA-dependent RNA polymerase [Sclerotinia nivalis mitovirus 2]
          Length = 712

 Score =  160 bits (404), Expect = 1e-36
 Identities = 150/509 (29%), Positives = 229/509 (44%), Gaps = 12/509 (2%)
 Frame = -3

Query: 1755 YAWVRTLAHYAEVKNPGTYVQYFIPFVRHLQVLLKNNGQMEAVKFLKVSLFSLYSYVSGN 1576
            Y +VR L     +  P      F+ F   ++ L  +NG +  VK+LK  L     +VSGN
Sbjct: 37   YPYVRLLIWSLRLDKPS-----FMKFATRIESLWIHNGLIFTVKYLKECLRICQHFVSGN 91

Query: 1575 PLKATIPLGHGIRLRNGLPAVWDRNLRDRIRKGDVKAIXXXXXXXXXXXXLDAKHPD-FD 1399
            P+  T  +   I +  G+P +   ++R ++   D+  I            +  K P    
Sbjct: 92   PVFVTTEMP--ISIVRGIPTIIPGSIRLQMHSRDLSVIRGVLSLLSVFRIM--KIPSTLK 147

Query: 1398 VSTIVKPHPDFSQNETFKAYQKF-CKEVFPTLLTKETGGFKPFRYQSALGYLIRSAGPNL 1222
            + +I  P      + T   Y+    K+V P          KP + +     L+RSAGPN 
Sbjct: 148  LESITGPFTGL--DSTLPKYELIKIKQVIPVFPQ-----IKPIKLK-----LLRSAGPNC 195

Query: 1221 NGPSMTGIQLDAAAWFNRPDNLILDWFTLHGDTKAVNAFSEISKDSHWTQENHPVSRQTL 1042
               SM GI LD  AW            + H + K +  F ++  +               
Sbjct: 196  K-VSMLGIWLDIKAW------------SQHSNFKVLIEFIQLFPNY-------------- 228

Query: 1041 RSFCWASRTPLAWPEETARTSFNDALENVPTGPI-LGRLHAINEPAGKVRIVAICDYWTQ 865
                      + + +   + ++N  L +VP+  + LG+L    E AGK R+ AI D  TQ
Sbjct: 229  ----------IEFRDMLLQEAYNLRL-SVPSKDLHLGKLAIKEEAAGKARVFAITDSITQ 277

Query: 864  VALKPIHDFLFDILKGISSDATFDQSGRVEAYFQRGLSP--------HWSFDLKAATDSI 709
              + PI D +F +L+ I  D TF+QS  ++   Q              +S+DL AATD +
Sbjct: 278  SVMGPISDAIFKMLRQIPMDGTFNQSAPLDRLVQLSKDGAISEKDRVFYSYDLSAATDRL 337

Query: 708  PLALYRACLTPLLRQEGEDIETGERRTNLWASILTDRDFLLPDSSSVVRYGTGQPMGALS 529
            P+ L +  L+         I  GE   + W+ ++TDRD+ L      +RY  GQPMGALS
Sbjct: 338  PINLQKDILS---------IYCGESFASKWSILMTDRDWYLTKEKRNLRYSVGQPMGALS 388

Query: 528  SWASMAIVHHSLVQFSAINAGLETTWYKDYLVLGDDVDIATKTAVADGYQSVCND-LSIT 352
            SWA +A+ HH +V  +A   G     +  Y +LGDD+ IA K +VAD Y  +  + L + 
Sbjct: 389  SWAMLALTHHFVVGMAANRVG--KLGFNHYALLGDDIVIADK-SVADSYYMIMTEILGVQ 445

Query: 351  IGLLKSLRSEKNCFEFANRRFYPDGDISP 265
            I L KSL S  N FEFA R    +G+++P
Sbjct: 446  INLSKSLIS-SNSFEFAKRLVTLEGEVTP 473


>dbj|BAJ23143.2| RNA-directed RNA polymerase [Rhizophagus sp. RF1 mitovirus]
          Length = 820

 Score =  159 bits (403), Expect = 3e-36
 Identities = 108/271 (39%), Positives = 144/271 (53%), Gaps = 18/271 (6%)
 Frame = -3

Query: 1089 DSHWTQENHPVSRQTLRSFCWASRTPL-----AWPEETARTSF---------NDALENVP 952
            D+ WT          L +  WA  T L     AW EE+  T           + A E +P
Sbjct: 206  DATWTAH--------LDARAWALDTELFRRFSAWLEESRLTRILRDLFGCIRSAAAEAIP 257

Query: 951  T-GPILGRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLFDILKGISSDATFDQSGRVE 775
               PILG+L  I E  GK RIVA  DYWTQ+AL P+H+ +   L+ +  D TF+Q    E
Sbjct: 258  NLSPILGKLSVIEEWGGKARIVAQMDYWTQMALTPLHNTINHFLRALKEDGTFNQHAIAE 317

Query: 774  AYFQRGLSPH---WSFDLKAATDSIPLALYRACLTPLLRQEGEDIETGERRTNLWASILT 604
               Q    P    +SFDL AATD +P+    + L+ L+        T +   N WASIL 
Sbjct: 318  RVRQWTADPSMEVFSFDLTAATDRVPITFQESILSYLM--------TSKSFGNGWASILV 369

Query: 603  DRDFLLPDSSSVVRYGTGQPMGALSSWASMAIVHHSLVQFSAINAGLETTWYKDYLVLGD 424
            DR+FL P +  ++ Y TGQPMGA SS+  +A+ HH +VQ +A  AGL  T Y+DY+VLGD
Sbjct: 370  DREFLTP-NGDLISYNTGQPMGARSSFPMLALTHHIIVQIAAARAGL--TVYRDYVVLGD 426

Query: 423  DVDIATKTAVADGYQSVCNDLSITIGLLKSL 331
            DV + T   VA  YQ++   L + I L KS+
Sbjct: 427  DVTL-TNAQVAAHYQTIMRCLGVPINLSKSI 456


>gb|ALD89119.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
            14]
          Length = 1024

 Score =  160 bits (404), Expect = 4e-36
 Identities = 101/256 (39%), Positives = 148/256 (57%), Gaps = 8/256 (3%)
 Frame = -3

Query: 945  PILGRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLFDILKGISSDATFDQSGRVEAYF 766
            P LG+L    E AGKVR+ A+   W Q  L+P+HD +F+IL G++ D TF+Q   ++ + 
Sbjct: 447  PSLGKLGLKEEAAGKVRVFAMVPTWFQNLLRPLHDIIFEILSGVAQDGTFNQMKPLKGHS 506

Query: 765  QRGLSPHWSFDLKAATDSIPLALYRACLTPLLRQEGEDIETGERRTNLWASILTDRDFLL 586
             R  +  +S DL AATD +PL +  A ++ L+   G D+ T       WA++LT  ++ +
Sbjct: 507  SR-FNMSFSLDLTAATDRLPLIIQTALMSQLI---GLDLATS------WANLLTKIEYSI 556

Query: 585  P----DSSSVVRYGTGQPMGALSSWASMAIVHHSLVQFSA--INAGLETTWYKDYLVLGD 424
                 ++   V+Y  GQPMGALSSWA +A+ HH LVQ SA  + A  E TW+ DY +LGD
Sbjct: 557  NSMKFNTYEKVKYTVGQPMGALSSWAMLALTHHLLVQISAWRVGAEKEGTWFSDYAILGD 616

Query: 423  DVDIATKTAVADGYQSVCNDLSITIGLLKSLRSEK-NCFEFANRRFYPDGDISPLSIKEE 247
            D+ +     VA  Y  V + + + IGL KS+ S K    EFA R F+   D+S +  KE 
Sbjct: 617  DL-VIFNYDVAHEYIKVIHKIGMEIGLHKSVLSRKFTSLEFAKRIFHRGHDVSAVPFKEF 675

Query: 246  LSALTWTGR-LEYAKR 202
             +AL   G  LE+A++
Sbjct: 676  FAALGGYGNILEFARK 691


>gb|AMM45292.1| putative replicase [Macrophomina phaseolina mitovirus 3]
          Length = 1029

 Score =  159 bits (403), Expect = 5e-36
 Identities = 105/266 (39%), Positives = 148/266 (55%), Gaps = 10/266 (3%)
 Frame = -3

Query: 939  LGRLHAINEPAGKVRIVAICDYWTQVALKPIHDFLFDILKGISSDATFDQSGRVEAYFQR 760
            LG+L    E AGKVR+ A+ D WTQ AL PIH+ +F ILK +  D TFDQ+  ++    R
Sbjct: 453  LGKLGTKEEAAGKVRVFAMVDAWTQWALYPIHELIFKILKDVPMDGTFDQTAPLK--HVR 510

Query: 759  GLSPHWSFDLKAATDSIPLALYRACLTPLLRQEGEDIETGERRTNLWASILTDRDFLL-- 586
              S  WS DL AATD +PL++ ++ +  +L         G      WA++LT R + L  
Sbjct: 511  PHSGFWSLDLSAATDRLPLSIQKSLIGAIL---------GRESAAAWANLLTGRTYALRT 561

Query: 585  ---PDSSSVVR--YGTGQPMGALSSWASMAIVHHSLVQFSAINAGL-ETTWYKDYLVLGD 424
                 + +V++  Y  GQPMGALSSWAS+A+ HH LVQ +A +AG  +   Y +Y VLGD
Sbjct: 562  EDHNGNETVIKLTYAVGQPMGALSSWASLALTHHFLVQCAAWSAGFPKWKLYTNYAVLGD 621

Query: 423  DVDIATKTAVADGYQSVCNDLSITIGLLKSLRSEKN-CFEFANRRFYPDGDISPLSIKEE 247
            DV I  + +VA  Y  +   L + +   KSL S +   FEFA R      D+SP++ KE 
Sbjct: 622  DVVIGDR-SVALAYLRIMKSLGVGVNTSKSLLSHRGIAFEFAKRTIVRGVDVSPVTFKEY 680

Query: 246  LSALTWTGR-LEYAKRILTRFGTSLK 172
             SA    G  L+  ++  T F  +L+
Sbjct: 681  YSATRNIGAFLQLMRKTGTPFARALQ 706