BLASTX nr result
ID: Ophiopogon22_contig00039717
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00039717
(716 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ALD89126.1| RNA-dependent RNA polymerase, partial [Rhizoctoni... 165 5e-43
gb|ALD89117.1| RNA-dependent RNA polymerase [Rhizoctonia solani ... 160 1e-41
gb|ANR02692.1| RNA-dependent RNA polymerase, partial [Rhizoctoni... 150 2e-41
gb|ANR02693.1| RNA-dependent RNA polymerase, partial [Rhizoctoni... 142 2e-38
gb|ALD89128.1| RNA-dependent RNA polymerase, partial [Rhizoctoni... 148 6e-38
gb|AMM45292.1| putative replicase [Macrophomina phaseolina mitov... 147 1e-36
gb|AIF33766.2| RNA-dependent RNA polymerase [Heterobasidion mito... 146 2e-36
gb|ANR02691.1| RNA-dependent RNA polymerase, partial [Rhizoctoni... 135 9e-36
gb|ALD89120.1| RNA-dependent RNA polymerase [Rhizoctonia solani ... 141 9e-35
ref|YP_004564622.1| RNA-dependent RNA polymerase [Tuber aestivum... 140 2e-34
gb|ALD89119.1| RNA-dependent RNA polymerase, partial [Rhizoctoni... 140 3e-34
emb|CEZ26296.1| RNA dependent RNA polymerase [Botrytis cinerea m... 135 8e-33
emb|CAJ32468.1| RNA-dependent RNA polymerase [Ophiostoma mitovir... 135 1e-32
ref|YP_002284334.2| RNA-dependent RNA polymerase [Botrytis ciner... 133 5e-32
emb|CEZ26300.1| RNA dependent RNA polymerase [Botrytis cinerea m... 132 2e-31
ref|YP_005352912.1| RNA dependent RNA polymerase [Clitocybe odor... 132 2e-31
gb|AVA17449.1| RNA-dependent RNA polymerase [Gigaspora margarita... 125 4e-29
gb|AGT55876.1| RNA-dependent RNA polymerase [Ophiostoma mitoviru... 123 2e-28
emb|CAJ32467.1| RNA-dependent RNA polymerase [Ophiostoma mitovir... 120 3e-27
gb|AIS37555.1| RNA-dependent RNA polymerase, partial [Cytospora ... 115 2e-26
>gb|ALD89126.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
7]
Length = 871
Score = 165 bits (417), Expect = 5e-43
Identities = 95/192 (49%), Positives = 119/192 (61%), Gaps = 1/192 (0%)
Frame = -3
Query: 645 SLFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGCLMVGRKYVCPKEIKLPGGPKQTI 466
SLFS DLS+ATDR+PL LQ+ +++ F A W +V R YV L K T
Sbjct: 351 SLFSLDLSAATDRLPLWLQEAIVAAFAGEVFARHWAEFLVNRDYV------LTLSDKNTD 404
Query: 465 CPEGF-VTYTTGQPMGALSSWAMLAFVHHAFVQWAALRAGVITLGEGWYAGYAILGDDVV 289
P + + Y GQPMGA SSWAMLA HH VQ+ A+ AGV+ G W+ YAILGDD+V
Sbjct: 405 TPVRYKLRYAVGQPMGAYSSWAMLALTHHFIVQFCAVSAGVVRSGL-WFEDYAILGDDIV 463
Query: 288 IARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFAKRTFRKGVDVSMVPFAEFIATR 109
I S VAK Y+ +M + VGIG HKSL+S G+ LEFAKRTF G DVS VP E+IA+
Sbjct: 464 IGNSRVAKAYIRVMATLGVGIGLHKSLISAGGTALEFAKRTFVHGKDVSPVPITEWIASL 523
Query: 108 LSLTALLELVRK 73
+ +E +RK
Sbjct: 524 NGPSCAVEFIRK 535
>gb|ALD89117.1| RNA-dependent RNA polymerase [Rhizoctonia solani mitovirus 12]
Length = 746
Score = 160 bits (405), Expect = 1e-41
Identities = 94/214 (43%), Positives = 128/214 (59%)
Frame = -3
Query: 714 QIRPIERLFEWQGANRQADGRLPSLFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGC 535
QI+P++ L + R SL+S DLS+ATDR+P+ LQ ++LSP + A A LW
Sbjct: 308 QIKPLKALLQ----------RNKSLYSLDLSAATDRLPIVLQMIVLSPLVGANFARLWSI 357
Query: 534 LMVGRKYVCPKEIKLPGGPKQTICPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALR 355
+++GR Y PK K + Y GQPMGAL+SWAMLA HH VQ+AA
Sbjct: 358 MLIGRPYSLPKSASEFLSMKDKQKEWKQLYYGAGQPMGALTSWAMLAVTHHYIVQFAAF- 416
Query: 354 AGVITLGEGWYAGYAILGDDVVIARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFA 175
+++ W+ YAILGDDVVIA +A +YL +M + V +G HKSL+S +G+ LEFA
Sbjct: 417 --LVSGKTRWFEDYAILGDDVVIADGPIAHKYLEIMSWIGVKVGIHKSLISPSGNSLEFA 474
Query: 174 KRTFRKGVDVSMVPFAEFIATRLSLTALLELVRK 73
KR F D S VP E A +S++A +EL+RK
Sbjct: 475 KRYFFNKKDCSAVPLKEVYAGTISISASIELMRK 508
>gb|ANR02692.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
9]
Length = 224
Score = 150 bits (378), Expect = 2e-41
Identities = 82/168 (48%), Positives = 105/168 (62%)
Frame = -3
Query: 645 SLFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGCLMVGRKYVCPKEIKLPGGPKQTI 466
SLFS DLS+ATDR+PL LQK +L + A+ W L+V R Y +K +
Sbjct: 65 SLFSLDLSAATDRLPLWLQKAILEGIMGQEYAQQWATLLVSRDYAL--SLKDRNNDRMV- 121
Query: 465 CPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALRAGVITLGEGWYAGYAILGDDVVI 286
+ Y GQPMGALSSWAMLA HH VQ+AA RAG + W+ Y +LGDD+VI
Sbjct: 122 --RYLIRYAVGQPMGALSSWAMLALTHHFIVQFAAYRAGF----KSWFTEYGVLGDDIVI 175
Query: 285 ARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFAKRTFRKGVDVS 142
+ VA++YL +M+ + VGIG HKSL+S +G LEFAK+TF G DVS
Sbjct: 176 GNTDVARQYLFIMRVLGVGIGLHKSLISISGRALEFAKKTFYMGTDVS 223
>gb|ANR02693.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
17]
Length = 221
Score = 142 bits (359), Expect = 2e-38
Identities = 82/172 (47%), Positives = 106/172 (61%)
Frame = -3
Query: 657 GRLPSLFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGCLMVGRKYVCPKEIKLPGGP 478
G + +S DL++ATDRIP+ LQ+ L++ + + A W L+VGRKYV P
Sbjct: 59 GTATAAYSLDLTAATDRIPMELQERLVANLVNSEFAANWKTLLVGRKYVA-------FSP 111
Query: 477 KQTICPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALRAGVITLGEGWYAGYAILGD 298
K+ + E +TY GQPMGALSSW+ LA HH VQ +A AGV GE W+ YA+LGD
Sbjct: 112 KRGVSAE--LTYGVGQPMGALSSWSSLAITHHYMVQVSAWLAGVTPKGE-WFTDYAVLGD 168
Query: 297 DVVIARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFAKRTFRKGVDVS 142
D+VI V YL ++ AM V G HKSL+S G +EFAKRT KGVD+S
Sbjct: 169 DLVIFNQRVKVHYLKIVAAMGVQCGAHKSLLSPRGVAIEFAKRTLYKGVDIS 220
>gb|ALD89128.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
9]
Length = 524
Score = 148 bits (373), Expect = 6e-38
Identities = 83/164 (50%), Positives = 105/164 (64%)
Frame = -3
Query: 645 SLFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGCLMVGRKYVCPKEIKLPGGPKQTI 466
SLFS DLS+ATDR+PL LQK +L+ + A W L+V R YV +K +
Sbjct: 369 SLFSLDLSAATDRLPLWLQKAILAGIMGQEYALQWATLLVNRDYVL--SLKDQNTDRMVR 426
Query: 465 CPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALRAGVITLGEGWYAGYAILGDDVVI 286
P + Y GQPMGALSSWAMLA HH VQ+AA RAG + W++ Y ILGDD+VI
Sbjct: 427 YP---IRYAVGQPMGALSSWAMLALTHHFIVQFAAYRAGF----KSWFSEYGILGDDIVI 479
Query: 285 ARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFAKRTFRKG 154
+ VAK+YL +M+ + VGIG HKSL+S +G LEFAK+TF G
Sbjct: 480 GNTDVAKQYLFIMRVLGVGIGLHKSLISISGRALEFAKKTFYMG 523
>gb|AMM45292.1| putative replicase [Macrophomina phaseolina mitovirus 3]
Length = 1029
Score = 147 bits (370), Expect = 1e-36
Identities = 87/191 (45%), Positives = 111/191 (58%), Gaps = 2/191 (1%)
Frame = -3
Query: 639 FSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGCLMVGRKYVCPKEIKLPGGPKQTICP 460
+S DLS+ATDR+PL++QK L+ L A W L+ GR Y E +T+
Sbjct: 516 WSLDLSAATDRLPLSIQKSLIGAILGRESAAAWANLLTGRTYALRTE---DHNGNETVIK 572
Query: 459 EGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALRAGVITLGEGW--YAGYAILGDDVVI 286
+TY GQPMGALSSWA LA HH VQ AA AG W Y YA+LGDDVVI
Sbjct: 573 ---LTYAVGQPMGALSSWASLALTHHFLVQCAAWSAGF----PKWKLYTNYAVLGDDVVI 625
Query: 285 ARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFAKRTFRKGVDVSMVPFAEFIATRL 106
VA YL +M+++ VG+ KSL+S G EFAKRT +GVDVS V F E+ +
Sbjct: 626 GDRSVALAYLRIMKSLGVGVNTSKSLLSHRGIAFEFAKRTIVRGVDVSPVTFKEYYSATR 685
Query: 105 SLTALLELVRK 73
++ A L+L+RK
Sbjct: 686 NIGAFLQLMRK 696
>gb|AIF33766.2| RNA-dependent RNA polymerase [Heterobasidion mitovirus 1]
Length = 836
Score = 146 bits (369), Expect = 2e-36
Identities = 88/215 (40%), Positives = 123/215 (57%), Gaps = 1/215 (0%)
Frame = -3
Query: 714 QIRPIERLFEWQGANRQADGRLPSLFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGC 535
Q++PI RL + L S DLS+ATDR+P+ +Q+ ++S T + W
Sbjct: 393 QLKPITRLLAQKPK---------VLDSLDLSAATDRLPIAIQEWIISKIFTPSIGKAWTT 443
Query: 534 LMVGRKYVCPKEIKLPGGPKQTICPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALR 355
L+VGR Y PK + T+ P+ VTY GQPMGALSSWAMLA HH VQ AA +
Sbjct: 444 LLVGRDYRVPKR-----DGQTTVLPKS-VTYAVGQPMGALSSWAMLAITHHFIVQIAAWQ 497
Query: 354 AGVITLGEGWYAGYAILGDDVVIARSCVAKEY-LALMQAMDVGIGDHKSLVSRNGSVLEF 178
+GV G+ W+ YA+LGDD+ + V+ Y L +++ + V +G KS++S G LEF
Sbjct: 498 SGVTKYGK-WFTAYALLGDDLTVGNRAVSNRYQLIMIKHLGVEVGLAKSIISDKGIGLEF 556
Query: 177 AKRTFRKGVDVSMVPFAEFIATRLSLTALLELVRK 73
AK+TF KG+DVS P E + + AL+ RK
Sbjct: 557 AKKTFFKGIDVSPRPIKELLGALQTPAALVSYARK 591
>gb|ANR02691.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
16]
Length = 229
Score = 135 bits (341), Expect = 9e-36
Identities = 81/175 (46%), Positives = 102/175 (58%), Gaps = 8/175 (4%)
Frame = -3
Query: 642 LFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGCLMVGRKYVCPKEIKLPGGPKQTIC 463
L+S DLS+ATDR+P+++QK LL A W L+VGR Y + P P
Sbjct: 63 LWSLDLSAATDRLPISIQKSLLGAIFGREWAASWAHLLVGRTYALRLDENQPFMP----- 117
Query: 462 PEGF------VTYTTGQPMGALSSWAMLAFVHHAFVQWAALRAGVITLGEGW--YAGYAI 307
P+G + YT GQPMGALSSWA LA HH VQ +A RAG W Y YA+
Sbjct: 118 PKGMKLGIHKLKYTVGQPMGALSSWASLAITHHFLVQCSAWRAGF----PKWKLYTNYAV 173
Query: 306 LGDDVVIARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFAKRTFRKGVDVS 142
LGDDVVI V+ +YL +M ++ VG+ KSL+S+ G+ LEFAKRT G DVS
Sbjct: 174 LGDDVVIGDHRVSTQYLEIMASLGVGVNTSKSLLSKTGTALEFAKRTIVNGTDVS 228
>gb|ALD89120.1| RNA-dependent RNA polymerase [Rhizoctonia solani mitovirus 15]
Length = 961
Score = 141 bits (356), Expect = 9e-35
Identities = 80/189 (42%), Positives = 110/189 (58%)
Frame = -3
Query: 639 FSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGCLMVGRKYVCPKEIKLPGGPKQTICP 460
+S DL++ATDR+P+ +Q VL ++ + W ++VGR Y+ K +
Sbjct: 484 YSLDLTAATDRLPIAIQTVLFKHLVSEEFSVQWMRILVGRGYMAFSS-------KYNVFK 536
Query: 459 EGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALRAGVITLGEGWYAGYAILGDDVVIAR 280
+ Y GQPMGALSSWA LA HH VQ AA AG+ +G W+ YA+LGDD+VI
Sbjct: 537 --LLEYAVGQPMGALSSWASLAITHHFIVQCAAWEAGICPVGT-WFTSYAVLGDDLVIFD 593
Query: 279 SCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFAKRTFRKGVDVSMVPFAEFIATRLSL 100
V +YLA++ A+ V G KSL+S G+ +EFAKRTF G D+S +P EFIA L+L
Sbjct: 594 QRVKVKYLAIVDALGVQCGIAKSLLSPTGTAIEFAKRTFWMGKDISPIPLLEFIAANLTL 653
Query: 99 TALLELVRK 73
+ RK
Sbjct: 654 ADAISFARK 662
>ref|YP_004564622.1| RNA-dependent RNA polymerase [Tuber aestivum mitovirus]
gb|AEG79311.1| RNA-dependent RNA polymerase [Tuber aestivum mitovirus]
Length = 793
Score = 140 bits (353), Expect = 2e-34
Identities = 89/203 (43%), Positives = 108/203 (53%), Gaps = 13/203 (6%)
Frame = -3
Query: 645 SLFSFDLSSATDRIPLTLQKVLLSPFLTAWGAE-------------LWGCLMVGRKYVCP 505
S+FSFDLS+ATDR+P+ +Q V+L+ W AE W L+V R Y P
Sbjct: 296 SVFSFDLSAATDRLPMDIQMVILNSLTPFWLAEKAVRHGVKGGLGDAWADLLVDRDYYLP 355
Query: 504 KEIKLPGGPKQTICPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALRAGVITLGEGW 325
+ K V Y GQPMGALSSWAMLA HH VQ+AA GV GW
Sbjct: 356 RWSGYARDSK--------VRYAVGQPMGALSSWAMLALTHHMIVQFAAASVGV----TGW 403
Query: 324 YAGYAILGDDVVIARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFAKRTFRKGVDV 145
+ Y +LGDD+VI S VAK Y LM + VGI D KSL S+ G V EFAKR
Sbjct: 404 FKEYMVLGDDIVIYNSEVAKAYSTLMGTLGVGISDTKSLTSKIG-VFEFAKRLMDLEGPC 462
Query: 144 SMVPFAEFIATRLSLTALLELVR 76
+P AEF A R +L+ L + R
Sbjct: 463 QGLPLAEFAAARFNLSILFQSFR 485
>gb|ALD89119.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
14]
Length = 1024
Score = 140 bits (352), Expect = 3e-34
Identities = 86/189 (45%), Positives = 109/189 (57%)
Frame = -3
Query: 639 FSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGCLMVGRKYVCPKEIKLPGGPKQTICP 460
FS DL++ATDR+PL +Q L+S + A W L+ +Y +K K
Sbjct: 513 FSLDLTAATDRLPLIIQTALMSQLIGLDLATSWANLLTKIEYSI-NSMKFNTYEK----- 566
Query: 459 EGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALRAGVITLGEGWYAGYAILGDDVVIAR 280
V YT GQPMGALSSWAMLA HH VQ +A R G G W++ YAILGDD+VI
Sbjct: 567 ---VKYTVGQPMGALSSWAMLALTHHLLVQISAWRVGAEKEGT-WFSDYAILGDDLVIFN 622
Query: 279 SCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFAKRTFRKGVDVSMVPFAEFIATRLSL 100
VA EY+ ++ + + IG HKS++SR + LEFAKR F +G DVS VPF EF A
Sbjct: 623 YDVAHEYIKVIHKIGMEIGLHKSVLSRKFTSLEFAKRIFHRGHDVSAVPFKEFFAALGGY 682
Query: 99 TALLELVRK 73
+LE RK
Sbjct: 683 GNILEFARK 691
>emb|CEZ26296.1| RNA dependent RNA polymerase [Botrytis cinerea mitovirus 1]
Length = 738
Score = 135 bits (341), Expect = 8e-33
Identities = 92/203 (45%), Positives = 116/203 (57%)
Frame = -3
Query: 714 QIRPIERLFEWQGANRQADGRLPSLFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGC 535
Q++P++RL E +R FSFDLS+ATDR+PLTLQK +L+ ++ AE WG
Sbjct: 332 QLKPLDRLHELSTQDR---------FSFDLSAATDRLPLTLQKDILTLLVSPSFAEAWGT 382
Query: 534 LMVGRKYVCPKEIKLPGGPKQTICPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALR 355
+VGR Y KL G E + Y+ GQPMGALSSW MLA HH VQ AA R
Sbjct: 383 ALVGRPY------KLKFG-----TTEDELMYSVGQPMGALSSWGMLALTHHTIVQVAASR 431
Query: 354 AGVITLGEGWYAGYAILGDDVVIARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFA 175
AG L + YA+LGDD+ IA VA YL +M+ + V I KSL+S G V+EFA
Sbjct: 432 AGYKDL----FLDYALLGDDICIANKAVADNYLLIMRDLGVEINLSKSLISSTG-VVEFA 486
Query: 174 KRTFRKGVDVSMVPFAEFIATRL 106
KR DVS P + + TRL
Sbjct: 487 KRWRVGQTDVS--PASPALITRL 507
>emb|CAJ32468.1| RNA-dependent RNA polymerase [Ophiostoma mitovirus 3b]
Length = 738
Score = 135 bits (340), Expect = 1e-32
Identities = 92/203 (45%), Positives = 115/203 (56%)
Frame = -3
Query: 714 QIRPIERLFEWQGANRQADGRLPSLFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGC 535
Q++P++RL E +R FSFDLS+ATDR+PLTLQK +L+ ++ AE WG
Sbjct: 332 QLKPLDRLHELSTQDR---------FSFDLSAATDRLPLTLQKDILTLLVSPSFAEAWGT 382
Query: 534 LMVGRKYVCPKEIKLPGGPKQTICPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALR 355
+VGR Y KL G E + Y+ GQPMGALSSW MLA HH VQ AA R
Sbjct: 383 ALVGRPY------KLKFG-----TTEDELMYSVGQPMGALSSWGMLALTHHTIVQVAASR 431
Query: 354 AGVITLGEGWYAGYAILGDDVVIARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFA 175
AG L + YA+LGDD+ IA VA YL +M + V I KSL+S G V+EFA
Sbjct: 432 AGYKDL----FLDYALLGDDICIANKAVADNYLLIMHDLGVEINLSKSLISSTG-VVEFA 486
Query: 174 KRTFRKGVDVSMVPFAEFIATRL 106
KR DVS P + + TRL
Sbjct: 487 KRWRVGQTDVS--PASPALITRL 507
>ref|YP_002284334.2| RNA-dependent RNA polymerase [Botrytis cinerea mitovirus 1]
gb|ABQ65153.3| RNA-dependent RNA polymerase [Botrytis cinerea mitovirus 1]
Length = 738
Score = 133 bits (335), Expect = 5e-32
Identities = 91/203 (44%), Positives = 115/203 (56%)
Frame = -3
Query: 714 QIRPIERLFEWQGANRQADGRLPSLFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGC 535
Q++P++RL E +R FSFDLS+ATDR+PLTLQK +L+ ++ AE WG
Sbjct: 332 QLKPLDRLHELSTQDR---------FSFDLSAATDRLPLTLQKDILTLLVSPSFAEAWGT 382
Query: 534 LMVGRKYVCPKEIKLPGGPKQTICPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALR 355
+VGR Y K G E + Y+ GQPMGALSSW MLA HH VQ AA R
Sbjct: 383 ALVGRPY------KWKFG-----TTEDELMYSVGQPMGALSSWGMLALTHHTIVQVAASR 431
Query: 354 AGVITLGEGWYAGYAILGDDVVIARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFA 175
AG L + YA+LGDD+ IA VA YL +M+ + V I KSL+S G V+EFA
Sbjct: 432 AGYKDL----FLDYALLGDDICIANKAVADNYLLIMRDLGVEINLSKSLISSTG-VVEFA 486
Query: 174 KRTFRKGVDVSMVPFAEFIATRL 106
KR DVS P + + TRL
Sbjct: 487 KRWRVGQTDVS--PASPALITRL 507
>emb|CEZ26300.1| RNA dependent RNA polymerase [Botrytis cinerea mitovirus 1]
Length = 738
Score = 132 bits (331), Expect = 2e-31
Identities = 90/203 (44%), Positives = 113/203 (55%)
Frame = -3
Query: 714 QIRPIERLFEWQGANRQADGRLPSLFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGC 535
Q++P++RL E +R FSFDLS+ATDR+PL LQK +L+ ++ AE WG
Sbjct: 332 QLKPLDRLHELSTQDR---------FSFDLSAATDRLPLALQKDILTLLVSPSFAEAWGT 382
Query: 534 LMVGRKYVCPKEIKLPGGPKQTICPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALR 355
+ GR Y KL G E + Y GQPMGALSSW MLA HH VQ AA R
Sbjct: 383 ALTGRPY------KLKFGTT-----EDELMYAVGQPMGALSSWGMLALTHHTIVQVAASR 431
Query: 354 AGVITLGEGWYAGYAILGDDVVIARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFA 175
AG L + YA+LGDD+ IA VA YL +M+ + V I KSL+S G V+EFA
Sbjct: 432 AGYKDL----FLDYALLGDDICIANKAVADNYLLIMRDLGVEINLSKSLISSTG-VVEFA 486
Query: 174 KRTFRKGVDVSMVPFAEFIATRL 106
KR DVS P + + TRL
Sbjct: 487 KRWRVGQTDVS--PASPALITRL 507
>ref|YP_005352912.1| RNA dependent RNA polymerase [Clitocybe odora virus]
emb|CCG47524.1| RNA dependent RNA polymerase [Clitocybe odora virus]
Length = 1136
Score = 132 bits (331), Expect = 2e-31
Identities = 88/212 (41%), Positives = 116/212 (54%), Gaps = 2/212 (0%)
Frame = -3
Query: 714 QIRPIERLFEWQGANRQADGRLPSLFSFDLSSATDRIPLTLQKVLLSPF--LTAWGAELW 541
Q++P+ER + ++ SL+S DLSSATDR+P+ +Q L+ LT AE W
Sbjct: 373 QLKPLERAWGFK-----------SLYSMDLSSATDRLPMRIQVPLIQQLFKLTNAEAEAW 421
Query: 540 GCLMVGRKYVCPKEIKLPGGPKQTICPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAA 361
L+V R Y CP P T V Y+ GQPMGALSSWAMLA HH VQ AA
Sbjct: 422 RSLLVDRPYYCP--------PLNTS-----VMYSVGQPMGALSSWAMLAMTHHLIVQVAA 468
Query: 360 LRAGVITLGEGWYAGYAILGDDVVIARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLE 181
R+G + + YA+LGDD+VI VAK Y ++ + V KS++S G LE
Sbjct: 469 WRSGFDK--KKLFRAYAVLGDDIVIFDKKVAKYYHRVLTGLGVECNLAKSIMSHRGIGLE 526
Query: 180 FAKRTFRKGVDVSMVPFAEFIATRLSLTALLE 85
FAK+TF +G +VS P E +A ALL+
Sbjct: 527 FAKKTFFQGFNVSPSPLTEVLAALKDPIALLQ 558
>gb|AVA17449.1| RNA-dependent RNA polymerase [Gigaspora margarita mitovirus 1]
Length = 794
Score = 125 bits (314), Expect = 4e-29
Identities = 78/189 (41%), Positives = 105/189 (55%)
Frame = -3
Query: 639 FSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGCLMVGRKYVCPKEIKLPGGPKQTICP 460
+S DLS+ATDR PL LQK+ + ++ A W LMV R + +LP G K C
Sbjct: 353 WSLDLSAATDRFPLALQKLAMKYLVSEEYAAAWATLMVDRPF------RLPVGYKPRDC- 405
Query: 459 EGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALRAGVITLGEGWYAGYAILGDDVVIAR 280
Y GQPMGA SSWA A HHA VQ+AA +G+ GW+ YA+LGDD++IA
Sbjct: 406 ----RYAVGQPMGAYSSWAAFALTHHATVQFAARLSGL----SGWFRDYALLGDDIIIAN 457
Query: 279 SCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFAKRTFRKGVDVSMVPFAEFIATRLSL 100
VA +Y L+ + V KS+ S N EFAKR +GVDVS P+ + + SL
Sbjct: 458 DRVAHKYRWLLSQLGVECSLAKSMAS-NQRTFEFAKRVLFRGVDVSGFPWKLWRIGQRSL 516
Query: 99 TALLELVRK 73
A++ L ++
Sbjct: 517 AAMISLAQR 525
>gb|AGT55876.1| RNA-dependent RNA polymerase [Ophiostoma mitovirus 1c]
Length = 788
Score = 123 bits (308), Expect = 2e-28
Identities = 80/215 (37%), Positives = 116/215 (53%), Gaps = 4/215 (1%)
Frame = -3
Query: 714 QIRPIERLFEWQGANRQADGRLPS----LFSFDLSSATDRIPLTLQKVLLSPFLTAWGAE 547
QI ++ F+ + R ++ S +FS DLS+ATDR+PLT+Q +L+ + G +
Sbjct: 301 QISIVDATFDQEEGVRTLSQKIKSGKKIVFSLDLSAATDRLPLTIQAQILNHIVPKLG-D 359
Query: 546 LWGCLMVGRKYVCPKEIKLPGGPKQTICPEGFVTYTTGQPMGALSSWAMLAFVHHAFVQW 367
W L+V R Y P I LP P G V Y GQPMGA SSWAMLA HH VQ+
Sbjct: 360 HWANLLVNRDYSVPNHITLPVNP-------GTVRYGAGQPMGAYSSWAMLALTHHFIVQY 412
Query: 366 AALRAGVITLGEGWYAGYAILGDDVVIARSCVAKEYLALMQAMDVGIGDHKSLVSRNGSV 187
A + + ++ Y ILGDD+++ + VAK+YL +M +DVG+ KSL+S G
Sbjct: 413 CAFK---VYHSNSFFKDYLILGDDLLLLDARVAKQYLKVMSQLDVGVNLAKSLISVRG-Y 468
Query: 186 LEFAKRTFRKGVDVSMVPFAEFIATRLSLTALLEL 82
EFAK+ + V EF + + ++ +L L
Sbjct: 469 GEFAKQFLSPEGPLQGVSLKEFSSLKDGMSNILSL 503
>emb|CAJ32467.1| RNA-dependent RNA polymerase [Ophiostoma mitovirus 1b]
Length = 776
Score = 120 bits (300), Expect = 3e-27
Identities = 75/190 (39%), Positives = 105/190 (55%)
Frame = -3
Query: 642 LFSFDLSSATDRIPLTLQKVLLSPFLTAWGAELWGCLMVGRKYVCPKEIKLPGGPKQTIC 463
+FS DLS+ATDR+PLT+Q +L+ + G + W L+V R Y P LP P
Sbjct: 318 VFSLDLSAATDRLPLTIQAQILNHIVPKLG-DHWANLLVNRDYSVPNHTTLPVNP----- 371
Query: 462 PEGFVTYTTGQPMGALSSWAMLAFVHHAFVQWAALRAGVITLGEGWYAGYAILGDDVVIA 283
G V Y GQPMGA SSWAMLA HH VQ+ A + + ++ Y ILGDD+++
Sbjct: 372 --GTVRYGAGQPMGAYSSWAMLALTHHFIVQYCAFK---VYHTNSFFKDYLILGDDLLLL 426
Query: 282 RSCVAKEYLALMQAMDVGIGDHKSLVSRNGSVLEFAKRTFRKGVDVSMVPFAEFIATRLS 103
+ VAK+YL +M +DVG+ KSL+S G EFAK+ + V EF + +
Sbjct: 427 DAKVAKQYLQVMNQLDVGVNLAKSLISVRG-YGEFAKQFLSPDGPLQGVSLREFSSLKDG 485
Query: 102 LTALLELVRK 73
++ +L L K
Sbjct: 486 MSNILSLSTK 495
>gb|AIS37555.1| RNA-dependent RNA polymerase, partial [Cytospora ribis mitovirus 1]
Length = 434
Score = 115 bits (289), Expect = 2e-26
Identities = 86/221 (38%), Positives = 109/221 (49%), Gaps = 7/221 (3%)
Frame = -3
Query: 714 QIRPIERLFEWQGANRQADGRLPSLFSFDLSSATDRIPLTLQKVLLS-------PFLTAW 556
Q+RPI L + LFS DLS+ATDR+P++LQ LL PFL
Sbjct: 27 QLRPIRNLLS---------KKYKGLFSLDLSAATDRLPVSLQARLLDILFKNEVPFL--- 74
Query: 555 GAELWGCLMVGRKYVCPKEIKLPGGPKQTICPEGFVTYTTGQPMGALSSWAMLAFVHHAF 376
+ W L+ R Y P+ G + Y GQPMGALSSWAMLA HH
Sbjct: 75 -GQKWCHLLTSRSYRY-------SDPRYG---SGTLRYGVGQPMGALSSWAMLALTHHFI 123
Query: 375 VQWAALRAGVITLGEGWYAGYAILGDDVVIARSCVAKEYLALMQAMDVGIGDHKSLVSRN 196
VQ AA +G Y YA+LGDD+V+ VA +YL LM + V KS++S
Sbjct: 124 VQVAAWSSGQPL--NRLYRCYAVLGDDLVLGSKAVADKYLKLMAHLGVSCSLAKSVLSPK 181
Query: 195 GSVLEFAKRTFRKGVDVSMVPFAEFIATRLSLTALLELVRK 73
G LEFAK+TF +GVDVS + E L+A +K
Sbjct: 182 GIGLEFAKKTFIRGVDVSPLSLKELSVALGDLSAFSAFSQK 222