BLASTX nr result

ID: Ophiopogon22_contig00036098 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00036098
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020158002.1| transcription factor IIIB 70 kDa subunit-lik...    54   4e-06
ref|XP_020157994.1| transcription factor IIIB 70 kDa subunit-lik...    54   5e-06

>ref|XP_020158002.1| transcription factor IIIB 70 kDa subunit-like isoform X2 [Aegilops
           tauschii subsp. tauschii]
          Length = 194

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 30/53 (56%), Positives = 35/53 (66%)
 Frame = +2

Query: 200 DTIISDAQHLLRRALEKEELFARGRRTRTHVAASCLYAALRRHRRPYMLIDLS 358
           D II  A +  + AL+    F RGRRT THVAASCLY A RR  +PY+LID S
Sbjct: 91  DDIICTAHNFYKLALDN---FTRGRRT-THVAASCLYIACRRSEKPYLLIDFS 139


>ref|XP_020157994.1| transcription factor IIIB 70 kDa subunit-like isoform X1 [Aegilops
           tauschii subsp. tauschii]
          Length = 207

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 30/53 (56%), Positives = 35/53 (66%)
 Frame = +2

Query: 200 DTIISDAQHLLRRALEKEELFARGRRTRTHVAASCLYAALRRHRRPYMLIDLS 358
           D II  A +  + AL+    F RGRRT THVAASCLY A RR  +PY+LID S
Sbjct: 91  DDIICTAHNFYKLALDN---FTRGRRT-THVAASCLYIACRRSEKPYLLIDFS 139


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