BLASTX nr result

ID: Ophiopogon22_contig00035685 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00035685
         (709 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK81956.1| uncharacterized protein A4U43_C01F34640 [Asparagu...    70   2e-11

>gb|ONK81956.1| uncharacterized protein A4U43_C01F34640 [Asparagus officinalis]
          Length = 140

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 60/164 (36%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
 Frame = -3

Query: 692 MDGEMVIESLDSLWFFSNIL-SHSXXXXXXXPKIQLKSDPVEP------PEILVKPVEAR 534
           MD   +I+SLDSLWF SN+L S S       P++Q  + PV+P      PEI   P EA 
Sbjct: 1   MDDAKIIDSLDSLWFSSNVLLSPSPKPTEAAPQLQPVAQPVDPNPTESPPEISADPSEAM 60

Query: 533 KESEEKQMPESKGFEISLGSHEVTELAQXXXXXXXXXXXXXXXXKFCEEEMSCLVRSALL 354
           KE E   + + +  +   G+                        +F +EEM  +  S L 
Sbjct: 61  KEPEISPVKKKRSDDDGDGTRR------------------RKPNEFHKEEMISMA-STLT 101

Query: 353 KHQH---SYRHGCGVMPLAASGGDLAMKEHLKSWAHA-VACTVK 234
           KHQ+   +YR G       A+G DLAMKE L+SWA A VACTV+
Sbjct: 102 KHQNYCCNYRCGAN-----AAGDDLAMKEQLRSWARAVVACTVE 140


Top