BLASTX nr result

ID: Ophiopogon22_contig00035534 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00035534
         (497 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KUM48257.1| hypothetical protein ABT39_MTgene5256 (mitochondr...    77   9e-16

>gb|KUM48257.1| hypothetical protein ABT39_MTgene5256 (mitochondrion) [Picea
           glauca]
          Length = 73

 Score = 77.4 bits (189), Expect = 9e-16
 Identities = 45/74 (60%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
 Frame = +2

Query: 131 MNGKTGVVSSLAGRTPSPLA*FEEQTRK----G*LFDGCGPMAKALPASCRLAVSERNLN 298
           MNGKTGVVS LAGR   PLA FEE+T+K    G + DGC PMA ALPASCRL      L 
Sbjct: 1   MNGKTGVVSLLAGRNLYPLASFEERTKKGYCLGRMIDGCSPMANALPASCRLNSLLFRLR 60

Query: 299 PPGAGWDGRLFLRH 340
               GWDGR+ LRH
Sbjct: 61  VV-FGWDGRICLRH 73


Top