BLASTX nr result

ID: Ophiopogon22_contig00034529 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00034529
         (570 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK54929.1| uncharacterized protein A4U43_UnF9620 [Asparagus ...    72   3e-11
ref|XP_020250651.1| homeobox protein LUMINIDEPENDENS [Asparagus ...    72   3e-11
ref|XP_010938434.1| PREDICTED: LOW QUALITY PROTEIN: homeobox pro...    57   4e-06

>gb|ONK54929.1| uncharacterized protein A4U43_UnF9620 [Asparagus officinalis]
          Length = 1060

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 56/163 (34%), Positives = 74/163 (45%), Gaps = 3/163 (1%)
 Frame = -3

Query: 553  KPPPMYAP--LQQSRVPETIEPPSHYPLNHPSVPLNPPAFLPKTPAWPPADNAASFARW- 383
            K P +Y     QQSR PET+   +HYP+NHP +P+      PKTPA  P +   +   + 
Sbjct: 916  KQPSLYTHPYQQQSRAPETMISSNHYPVNHPQLPIYSQ---PKTPAIYPGNTGTNSNYYA 972

Query: 382  EPMPECWDGGGRLDDPATDXXXXXXXXXXXXXXXXXYPRRNEYTPGSGMGTWSLEGGGPA 203
            +P P  ++       P                     PRRNEY    G+G+WS E   PA
Sbjct: 973  DPNPNNYNVNSHSIYP---------------------PRRNEYAARGGLGSWSPE-DSPA 1010

Query: 202  VGLPEFRGYPYDREYLEPMRDQFDHWSYHDRSRQRQWDSGQRS 74
            V     R   + R+Y  P  D+   W     SRQRQWDSG R+
Sbjct: 1011 V----VRNSSHGRDYY-PEFDRSREW-----SRQRQWDSGHRN 1043


>ref|XP_020250651.1| homeobox protein LUMINIDEPENDENS [Asparagus officinalis]
          Length = 1092

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 56/163 (34%), Positives = 74/163 (45%), Gaps = 3/163 (1%)
 Frame = -3

Query: 553  KPPPMYAP--LQQSRVPETIEPPSHYPLNHPSVPLNPPAFLPKTPAWPPADNAASFARW- 383
            K P +Y     QQSR PET+   +HYP+NHP +P+      PKTPA  P +   +   + 
Sbjct: 948  KQPSLYTHPYQQQSRAPETMISSNHYPVNHPQLPIYSQ---PKTPAIYPGNTGTNSNYYA 1004

Query: 382  EPMPECWDGGGRLDDPATDXXXXXXXXXXXXXXXXXYPRRNEYTPGSGMGTWSLEGGGPA 203
            +P P  ++       P                     PRRNEY    G+G+WS E   PA
Sbjct: 1005 DPNPNNYNVNSHSIYP---------------------PRRNEYAARGGLGSWSPE-DSPA 1042

Query: 202  VGLPEFRGYPYDREYLEPMRDQFDHWSYHDRSRQRQWDSGQRS 74
            V     R   + R+Y  P  D+   W     SRQRQWDSG R+
Sbjct: 1043 V----VRNSSHGRDYY-PEFDRSREW-----SRQRQWDSGHRN 1075


>ref|XP_010938434.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein LUMINIDEPENDENS-like
            [Elaeis guineensis]
          Length = 1056

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 55/196 (28%), Positives = 69/196 (35%), Gaps = 36/196 (18%)
 Frame = -3

Query: 550  PPPMYAPLQQSRVPETIEPPSHYPLNH-----PSVPL--------------------NPP 446
            P  MY PLQ S VP++I P   YP+ +     PSVP                      PP
Sbjct: 856  PTSMY-PLQHSSVPDSILPTKQYPITNVPSAPPSVPRQESFNHNPSPMTTYPTLPRPQPP 914

Query: 445  AFLPKTPAWP--PADNAASFARWEPMPECWDGGGRLDDPATDXXXXXXXXXXXXXXXXXY 272
             F  + P WP   A +AAS  R  P P+ W G       A+                   
Sbjct: 915  TFSSRIPTWPSGAAASAASIGRPNPTPDPWIGRSNAMSEASVPNQRFLANGINYNAHTKG 974

Query: 271  P---------RRNEYTPGSGMGTWSLEGGGPAVGLPEFRGYPYDREYLEPMRDQFDHWSY 119
            P          R E   GS + TWS EG    +G          R Y   +R   DH  +
Sbjct: 975  PLFSPVMPPGDRYEIVDGSQVETWSPEGSPVRLG---------GRNYSGTVR---DHGRH 1022

Query: 118  HDRSRQRQWDSGQRSQ 71
            H     R+WD G R +
Sbjct: 1023 HRPEWPRRWDPGNRDR 1038


Top