BLASTX nr result
ID: Ophiopogon22_contig00034452
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00034452
(635 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OMO55593.1| reverse transcriptase [Corchorus capsularis] 194 2e-63
gb|OMO91869.1| reverse transcriptase [Corchorus capsularis] 185 6e-61
gb|OMO58913.1| reverse transcriptase [Corchorus capsularis] 185 1e-60
gb|PRQ45918.1| putative nucleotidyltransferase, Ribonuclease H [... 182 2e-58
ref|XP_020249325.1| uncharacterized protein LOC109826720 [Aspara... 187 3e-56
gb|AAQ56486.1| putative polyprotein [Oryza sativa Japonica Group] 166 9e-56
gb|ABA97045.1| retrotransposon protein, putative, Ty3-gypsy subc... 167 1e-55
gb|ABA98093.1| retrotransposon protein, putative, Ty3-gypsy subc... 167 1e-55
gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-... 166 2e-55
gb|AAP44586.1| putative polyprotein [Oryza sativa Japonica Group... 164 3e-55
gb|ABA96087.1| retrotransposon protein, putative, Ty3-gypsy subc... 166 3e-55
gb|ABA98266.1| retrotransposon protein, putative, Ty3-gypsy subc... 166 3e-55
emb|CAE02386.2| OSJNBb0080H08.12 [Oryza sativa Japonica Group] 165 5e-55
gb|AAM08802.1|AC090486_12 putative retroelement [Oryza sativa Ja... 165 5e-55
emb|CAE04765.3| OSJNBa0079C19.6 [Oryza sativa Japonica Group] 165 6e-55
emb|CAE05905.1| OSJNBa0061C08.12 [Oryza sativa Japonica Group] 165 6e-55
gb|ABA98185.1| retrotransposon protein, putative, Ty3-gypsy subc... 165 6e-55
emb|CAH65747.1| OSIGBa0102B11.1 [Oryza sativa] 165 6e-55
gb|AAP50978.1| putative polyprotein [Oryza sativa Japonica Group... 165 6e-55
gb|ABA98029.2| retrotransposon protein, putative, Ty3-gypsy subc... 165 6e-55
>gb|OMO55593.1| reverse transcriptase [Corchorus capsularis]
Length = 1385
Score = 194 bits (494), Expect(2) = 2e-63
Identities = 90/161 (55%), Positives = 121/161 (75%), Gaps = 1/161 (0%)
Frame = +2
Query: 155 LTKQKELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEA 334
LT Q+ +L ++ R+++ VR+ T+G L S +I+PTLIE I+ AQ DS LQK R +E
Sbjct: 900 LTSQRSILDDLRRMEIG-VRKHGTEGMLASLRIQPTLIERIKEAQLVDSALQKVRANIET 958
Query: 335 GLRTDLRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWW 511
G+ +D RIH DG+L F DR+CVP ++++ +L EAH S Y++HPGGTKMY DLK+ +WW
Sbjct: 959 GVPSDFRIHDDGSLRFDDRLCVPNDVEIKKVILDEAHYSGYTVHPGGTKMYRDLKETYWW 1018
Query: 512 NAMKREVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
N MKRE+ + VA+C+VCQQVK EHQ+P G LQPLPIPEWKW
Sbjct: 1019 NNMKREIGEFVAQCIVCQQVKVEHQRPAGQLQPLPIPEWKW 1059
Score = 76.6 bits (187), Expect(2) = 2e-63
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRK 137
LKYIFTQKE+NMRQR+W EL+ DYD+ + YHPGK NVV D LSRK
Sbjct: 847 LKYIFTQKEINMRQRRWLELLKDYDLTISYHPGKANVVADALSRK 891
>gb|OMO91869.1| reverse transcriptase [Corchorus capsularis]
Length = 1401
Score = 185 bits (470), Expect(2) = 6e-61
Identities = 92/164 (56%), Positives = 118/164 (71%), Gaps = 4/164 (2%)
Frame = +2
Query: 155 LTKQKELLKEMMRLDLMIVRRISTQGE---LMSFQIKPTLIEEIRAAQSGDSRLQKFREQ 325
+T Q+ LL+E+ + +V QGE L S ++P+LIE I+ AQ D L + +E
Sbjct: 955 ITTQRRLLEELDGEQIEVVM----QGEGVLLASLVVQPSLIERIKVAQKDDLELCRIKED 1010
Query: 326 VEAGLRTDLRIHSDGALYFGDRICVPKGDV-RQKVLAEAHSSAYSIHPGGTKMY*DLKKH 502
VE GL+TD IH DG L FG R+CVP V ++++L EAH S ++IHPGGTKMY DLK++
Sbjct: 1011 VENGLKTDFNIHIDGTLQFGSRLCVPNDFVLKREILEEAHGSRFTIHPGGTKMYKDLKEN 1070
Query: 503 FWWNAMKREVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
FWWN MKRE+AQ V++CLVCQQVKAEHQ+P GLLQPL IPEWKW
Sbjct: 1071 FWWNNMKREIAQFVSQCLVCQQVKAEHQRPSGLLQPLEIPEWKW 1114
Score = 77.4 bits (189), Expect(2) = 6e-61
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRK 137
LKY+FTQKELNMRQR+W EL+ DYD+ + YHPGK NVV D LSRK
Sbjct: 902 LKYLFTQKELNMRQRRWLELIKDYDLSINYHPGKANVVVDALSRK 946
>gb|OMO58913.1| reverse transcriptase [Corchorus capsularis]
Length = 1477
Score = 185 bits (469), Expect(2) = 1e-60
Identities = 88/161 (54%), Positives = 118/161 (73%), Gaps = 1/161 (0%)
Frame = +2
Query: 155 LTKQKELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEA 334
LT Q+ +L ++ R+++ VR+ +G L S +I+P LIE I+ AQ DS LQK R +E
Sbjct: 1020 LTSQRSILDDLRRMEIG-VRKHGIEGMLASLRIQPMLIERIKEAQLVDSALQKVRANIET 1078
Query: 335 GLRTDLRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWW 511
G +D R H DG+L FGDR+CVP ++++ VL EAH S Y++HPGGTKMY DLK+ +WW
Sbjct: 1079 GAPSDFRTHDDGSLRFGDRLCVPNDVEIKKVVLDEAHYSGYTVHPGGTKMYRDLKETYWW 1138
Query: 512 NAMKREVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
N MKRE+ + +A+C+VCQQVK EHQ+P G LQPLPIPEWKW
Sbjct: 1139 NNMKREIGE-LAQCIVCQQVKVEHQRPAGQLQPLPIPEWKW 1178
Score = 76.6 bits (187), Expect(2) = 1e-60
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRK 137
LKYIFTQKE+NMRQR+W EL+ DYD+ + YHPGK NVV D LSRK
Sbjct: 967 LKYIFTQKEINMRQRRWLELLKDYDLTISYHPGKANVVADALSRK 1011
>gb|PRQ45918.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
Length = 815
Score = 182 bits (461), Expect(2) = 2e-58
Identities = 83/134 (61%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
Frame = +2
Query: 236 LMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTDLRIHSDGALYFGDRICVPK-GD 412
+ SF ++P LI+++R AQ D LQ+ RE VE G R D + DGAL FG+RICVPK D
Sbjct: 332 IASFHVRPILIDKVREAQLHDEALQEVREAVENGAREDFIVRGDGALMFGNRICVPKQDD 391
Query: 413 VRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKREVAQHVAKCLVCQQVKAEHQKP 592
++Q++L EAHSS Y++HPGGTKMY LK+++WW+ MKRE+A +V +CLVCQQVKAE QKP
Sbjct: 392 LKQEILEEAHSSPYAMHPGGTKMYRTLKEYYWWSNMKREIADYVRRCLVCQQVKAERQKP 451
Query: 593 PGLLQPLPIPEWKW 634
GLLQPLPIPEWKW
Sbjct: 452 SGLLQPLPIPEWKW 465
Score = 72.4 bits (176), Expect(2) = 2e-58
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
L+Y+ TQKE+N+RQR+W EL+ DYD ++YHPG+ NVV D LSRK Y
Sbjct: 246 LQYLLTQKEINLRQRRWLELIKDYDCTIEYHPGRANVVADALSRKTY 292
>ref|XP_020249325.1| uncharacterized protein LOC109826720 [Asparagus officinalis]
Length = 221
Score = 187 bits (474), Expect = 3e-56
Identities = 89/129 (68%), Positives = 104/129 (80%)
Frame = +2
Query: 248 QIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTDLRIHSDGALYFGDRICVPKGDVRQKV 427
+I+ TL+E I+AAQ+GDS LQK RE AGLR++ +H DG+L FG RICVP+GDVR+++
Sbjct: 93 KIQSTLVERIKAAQAGDSFLQKCRELAVAGLRSEFVVHEDGSLRFGSRICVPEGDVREEI 152
Query: 428 LAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKREVAQHVAKCLVCQQVKAEHQKPPGLLQ 607
L EAHSS YSIHP GTKMY DLK +FWW MKR VA+ VAKCLVCQQVKAEHQ GLLQ
Sbjct: 153 LREAHSSPYSIHPRGTKMYKDLKLNFWWRGMKRSVARSVAKCLVCQQVKAEHQCIAGLLQ 212
Query: 608 PLPIPEWKW 634
PL IPEWKW
Sbjct: 213 PLLIPEWKW 221
>gb|AAQ56486.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2032
Score = 166 bits (419), Expect(2) = 9e-56
Identities = 81/156 (51%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IVRR G + + + KPTLI+++R AQ D +Q+ ++ + G
Sbjct: 1594 ELCKEFERLNLGIVRR----GFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIG 1649
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH + YSIHPG TKMY DL++ FWW +MKR
Sbjct: 1650 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLEERFWWASMKR 1709
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1710 EIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1745
Score = 79.7 bits (195), Expect(2) = 9e-56
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM +QYHPGK NVV D LSRK Y
Sbjct: 1536 LKYIFTQPDLNMRQRRWLELIKDYDMGIQYHPGKANVVADALSRKGY 1582
>gb|ABA97045.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1474
Score = 167 bits (423), Expect(2) = 1e-55
Identities = 82/156 (52%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IVRR G + + + KPTLI+++R AQ D +Q+ ++ + G
Sbjct: 962 ELCKEFERLNLGIVRR----GFVAALEAKPTLIDQVREAQINDLDIQEIKKNMRRGKAIG 1017
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1018 FMEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1077
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1078 EIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1113
Score = 77.8 bits (190), Expect(2) = 1e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 904 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 950
>gb|ABA98093.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1424
Score = 167 bits (423), Expect(2) = 1e-55
Identities = 82/156 (52%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ D +Q+ ++ + G T
Sbjct: 958 ELCKEFERLNLGIVSR----GFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKATG 1013
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1014 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1073
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1074 EIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1109
Score = 77.8 bits (190), Expect(2) = 1e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 900 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 946
>gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
gb|ABA92434.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1847
Score = 166 bits (421), Expect(2) = 2e-55
Identities = 81/156 (51%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ D +Q+ ++ + G
Sbjct: 1400 ELCKEFERLNLGIVSR----GFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIG 1455
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1456 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1515
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C+VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1516 EIAEYVAVCVVCQRVKAEHQKPVGLLQPLKIPEWKW 1551
Score = 77.8 bits (190), Expect(2) = 2e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 1342 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 1388
>gb|AAP44586.1| putative polyprotein [Oryza sativa Japonica Group]
gb|ABF97037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1436
Score = 164 bits (416), Expect(2) = 3e-55
Identities = 81/156 (51%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ D +Q+ ++ + G
Sbjct: 924 ELCKEFERLNLGIVSR----GFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIG 979
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH++ YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 980 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHNTLYSIHPGSTKMYQDLKERFWWASMKR 1039
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++ A C VCQQVKAEHQKP GLLQPL IPEWKW
Sbjct: 1040 EIAEYEAVCDVCQQVKAEHQKPAGLLQPLKIPEWKW 1075
Score = 79.3 bits (194), Expect(2) = 3e-55
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK+NVV D LSRK Y
Sbjct: 866 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKVNVVADALSRKGY 912
>gb|ABA96087.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1111
Score = 166 bits (420), Expect(2) = 3e-55
Identities = 82/156 (52%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ+ D +Q+ ++ + G
Sbjct: 599 ELCKEFERLNLGIVGR----GFVAALEAKPTLIDQVREAQNNDPDIQEIKKNMRRGKAIG 654
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ VL EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 655 FLEDEQGTVWLGERICVPDNKDLKDAVLKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 714
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 715 EIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 750
Score = 77.8 bits (190), Expect(2) = 3e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 541 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 587
>gb|ABA98266.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1473
Score = 166 bits (419), Expect(2) = 3e-55
Identities = 82/156 (52%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ D +QK ++ + G
Sbjct: 961 ELCKEFERLNLGIVGR----GFVAALEAKPTLIDQVREAQINDPDIQKIKKNMRRGKAIG 1016
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1017 FLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1076
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1077 EIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1112
Score = 77.8 bits (190), Expect(2) = 3e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 903 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 949
>emb|CAE02386.2| OSJNBb0080H08.12 [Oryza sativa Japonica Group]
Length = 1666
Score = 165 bits (418), Expect(2) = 5e-55
Identities = 81/156 (51%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ+ D +Q+ ++ + G
Sbjct: 1215 ELCKEFERLNLGIVGR----GFVAALEAKPTLIDQVREAQNNDPDIQEIKKNMRRGKAIG 1270
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1271 FLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1330
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1331 EIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1366
Score = 77.8 bits (190), Expect(2) = 5e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 1157 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 1203
>gb|AAM08802.1|AC090486_12 putative retroelement [Oryza sativa Japonica Group]
gb|AAP52977.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1594
Score = 165 bits (418), Expect(2) = 5e-55
Identities = 81/156 (51%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ D +Q+ ++ + G
Sbjct: 1223 ELCKEFERLNLGIVSR----GFVAALEAKPTLIDQVREAQINDPDIQEIKKNIRRGKAIG 1278
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1279 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1338
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1339 EIAEYVAVCDVCQRVKAEHQKPVGLLQPLKIPEWKW 1374
Score = 77.8 bits (190), Expect(2) = 5e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 1165 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 1211
>emb|CAE04765.3| OSJNBa0079C19.6 [Oryza sativa Japonica Group]
Length = 1998
Score = 165 bits (417), Expect(2) = 6e-55
Identities = 82/156 (52%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ D +Q+ ++ + G
Sbjct: 1802 ELCKEFERLNLGIVGR----GFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIG 1857
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ VL EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1858 FLEDEQGTVWLGERICVPDNKDLKDAVLKEAHDTLYSIHPGSTKMYKDLKERFWWASMKR 1917
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1918 EIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1953
Score = 77.8 bits (190), Expect(2) = 6e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 1744 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 1790
Score = 155 bits (391), Expect(2) = 1e-50
Identities = 77/156 (49%), Positives = 104/156 (66%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL ++M L+L IV R G L + + KPTL+++IR AQ D + + ++ G
Sbjct: 1248 ELSQQMEGLNLSIVGR----GFLAALEAKPTLLDQIREAQKNDPDMHGLLKNMKQGKAAG 1303
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G L+ G+R+CVP +++Q +L EAH S YSIHPG TKMY DLK+ +WW +MKR
Sbjct: 1304 FTEDEHGTLWNGNRVCVPDNRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKR 1363
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A+ VA C VCQ+VKAEHQ+P GLLQPL +PEWKW
Sbjct: 1364 EIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKW 1399
Score = 73.2 bits (178), Expect(2) = 1e-50
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ ++N+RQR+W EL+ DYD+ + YHPGK NVV D LSRK +
Sbjct: 1190 LKYIFTQSDMNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRKSH 1236
>emb|CAE05905.1| OSJNBa0061C08.12 [Oryza sativa Japonica Group]
Length = 1971
Score = 165 bits (417), Expect(2) = 6e-55
Identities = 82/156 (52%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ D +Q+ ++ + G
Sbjct: 1775 ELCKEFERLNLGIVGR----GFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIG 1830
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ VL EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1831 FLEDEQGTVWLGERICVPDNKDLKDAVLKEAHDTLYSIHPGSTKMYKDLKERFWWASMKR 1890
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1891 EIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1926
Score = 77.8 bits (190), Expect(2) = 6e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 1717 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 1763
Score = 155 bits (392), Expect(2) = 4e-50
Identities = 77/156 (49%), Positives = 104/156 (66%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL ++M L+L IV R G L + + KPTL+++IR AQ D + + ++ G
Sbjct: 1221 ELSQQMEALNLSIVGR----GFLAALEAKPTLLDQIREAQKNDPDMHGLLKNMKQGKAAG 1276
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G L+ G+R+CVP +++Q +L EAH S YSIHPG TKMY DLK+ +WW +MKR
Sbjct: 1277 FTEDEHGTLWNGNRVCVPDNRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKR 1336
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A+ VA C VCQ+VKAEHQ+P GLLQPL +PEWKW
Sbjct: 1337 EIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKW 1372
Score = 71.2 bits (173), Expect(2) = 4e-50
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ ++N+RQR+W EL+ DYD+ + YHPGK NV D LSRK +
Sbjct: 1163 LKYIFTQSDMNLRQRRWLELIKDYDVGIHYHPGKANVFADALSRKSH 1209
>gb|ABA98185.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1699
Score = 165 bits (417), Expect(2) = 6e-55
Identities = 80/156 (51%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ D +Q+ ++ + G
Sbjct: 1187 ELCKEFERLNLGIVSR----GFVAALEAKPTLIDQVREAQINDPNIQEIKKNMRRGKAIG 1242
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1243 FMEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGTTKMYQDLKERFWWASMKR 1302
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A+++A C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1303 EIAEYIAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1338
Score = 77.8 bits (190), Expect(2) = 6e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 1129 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 1175
>emb|CAH65747.1| OSIGBa0102B11.1 [Oryza sativa]
Length = 1601
Score = 165 bits (417), Expect(2) = 6e-55
Identities = 81/156 (51%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ D +Q+ ++ + G
Sbjct: 1089 ELCKEFERLNLGIVSR----GFVAALEAKPTLIDQVREAQVNDPDIQEIKKNMRRGKAIG 1144
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1145 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1204
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1205 EIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1240
Score = 77.8 bits (190), Expect(2) = 6e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 1031 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 1077
>gb|AAP50978.1| putative polyprotein [Oryza sativa Japonica Group]
gb|ABF97988.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1564
Score = 165 bits (417), Expect(2) = 6e-55
Identities = 81/156 (51%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI+++R AQ D +Q+ ++ + G
Sbjct: 1102 ELCKEFERLNLGIVSR----GFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIG 1157
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1158 FLEDEQGTVWLGERICVPDNKDLKDAILREAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1217
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1218 EIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1253
Score = 77.8 bits (190), Expect(2) = 6e-55
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK NVV D LSRK Y
Sbjct: 1045 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGY 1091
>gb|ABA98029.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1541
Score = 165 bits (418), Expect(2) = 6e-55
Identities = 82/156 (52%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Frame = +2
Query: 170 ELLKEMMRLDLMIVRRISTQGELMSFQIKPTLIEEIRAAQSGDSRLQKFREQVEAGLRTD 349
EL KE RL+L IV R G + + + KPTLI++IR AQ D +Q+ ++ + G
Sbjct: 1136 ELCKEFERLNLGIVSR----GFVAALEAKPTLIDQIREAQINDPDIQEIKKNMRRGRAIG 1191
Query: 350 LRIHSDGALYFGDRICVPKG-DVRQKVLAEAHSSAYSIHPGGTKMY*DLKKHFWWNAMKR 526
G ++ G+RICVP D++ +L EAH + YSIHPG TKMY DLK+ FWW +MKR
Sbjct: 1192 FLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1251
Query: 527 EVAQHVAKCLVCQQVKAEHQKPPGLLQPLPIPEWKW 634
E+A++VA C VCQ+VKAEHQKP GLLQPL IPEWKW
Sbjct: 1252 EIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1287
Score = 77.4 bits (189), Expect(2) = 6e-55
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +3
Query: 3 LKYIFTQKELNMRQRKWFELVADYDMDLQYHPGKINVVPDVLSRKPY 143
LKYIFTQ +LNMRQR+W EL+ DYDM + YHPGK+NVV D L RK Y
Sbjct: 1078 LKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKVNVVADALRRKGY 1124