BLASTX nr result

ID: Ophiopogon22_contig00034399 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00034399
         (506 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     79   2e-19
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     44   8e-08
gb|ABD63154.1| hypothetical protein 20.t00006 [Asparagus officin...    44   1e-07
ref|XP_020266363.1| uncharacterized protein LOC109841837 [Aspara...    41   6e-07
ref|XP_020258335.1| uncharacterized protein LOC109834719 [Aspara...    56   1e-06

>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 79.3 bits (194), Expect(2) = 2e-19
 Identities = 48/113 (42%), Positives = 64/113 (56%)
 Frame = -1

Query: 506  VAEC*SWKQLVSQGEQTESLVVRLKTENSLFNGPRHERFNPRAPNQALRPKEKDTMATES 327
            VAEC SW+QLVSQGEQ E +V R+K E      P+ +    R  N A R K K+T+A + 
Sbjct: 691  VAECRSWRQLVSQGEQAEEIVARIKAEEE----PQPKPQQQRNQNNAQRSKGKETLAADY 746

Query: 326  TXXXXXXXXXPRRTNASGPAWVEKQYTFKDENVVPLFKLLQKCNKLKLPDPKK 168
            T                 P    KQY+FK+E+V  LF+LL+K NKL+LP+ +K
Sbjct: 747  TQVPPPTKQGKTPNQQRTP----KQYSFKEEHVDTLFQLLRKNNKLQLPEIRK 795



 Score = 43.9 bits (102), Expect(2) = 2e-19
 Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = -3

Query: 156 DMLQVLVYAQVLKLKPEERRVTNNALSLQFGRDLPPVPF--GVISMLKEKLKL 4
           D+LQ LV A VL LKPE++ V+ N +++QFG D PPV    GVI + K ++ L
Sbjct: 826 DILQNLVNANVLTLKPEQKTVSTNLIAVQFG-DFPPVAAADGVIPVRKGEMHL 877


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 43.9 bits (102), Expect(2) = 8e-08
 Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = -3

Query: 156  DMLQVLVYAQVLKLKPEERRVTNNALSLQFGRDLPPVPF--GVISMLKEKLKL 4
            D+LQ LV A VL LKPE++ V+ N +++QFG D PPV    GVI + K ++ L
Sbjct: 1688 DILQNLVNANVLTLKPEQKTVSTNLIAVQFG-DFPPVAAADGVIPVRKGEMHL 1739



 Score = 40.0 bits (92), Expect(2) = 8e-08
 Identities = 18/30 (60%), Positives = 26/30 (86%)
 Frame = -1

Query: 257  KQYTFKDENVVPLFKLLQKCNKLKLPDPKK 168
            KQY+FK+E+V  LF+LL+K NKL+LP+ +K
Sbjct: 1628 KQYSFKEEHVDTLFQLLRKNNKLQLPEIRK 1657


>gb|ABD63154.1| hypothetical protein 20.t00006 [Asparagus officinalis]
          Length = 851

 Score = 43.5 bits (101), Expect(2) = 1e-07
 Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = -3

Query: 156 DMLQVLVYAQVLKLKPEERRVTNNALSLQFGRDLPPV--PFGVISMLKEKLKL 4
           D+LQ LV A VL LKPE++ V+ N +++QFG D PPV    GVI + K ++ L
Sbjct: 675 DILQNLVNANVLTLKPEQKTVSTNMIAVQFG-DFPPVVTANGVIPIRKGEMHL 726



 Score = 40.0 bits (92), Expect(2) = 1e-07
 Identities = 18/30 (60%), Positives = 26/30 (86%)
 Frame = -1

Query: 257 KQYTFKDENVVPLFKLLQKCNKLKLPDPKK 168
           KQY+FK+E+V  LF+LL+K NKL+LP+ +K
Sbjct: 615 KQYSFKEEHVDTLFQLLRKNNKLQLPEIRK 644


>ref|XP_020266363.1| uncharacterized protein LOC109841837 [Asparagus officinalis]
          Length = 406

 Score = 40.8 bits (94), Expect(2) = 6e-07
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
 Frame = -3

Query: 156 DMLQVLVYAQVLKLKPEERRVTNNALSLQFGRDLPPV--PFGVISMLKEKLKLI 1
           D LQ L  A VLK +   ++VT N ++L FGRDL  V  P G++ + K  LK+I
Sbjct: 333 DKLQALYDAGVLKKEKVHKQVTTNMVTLSFGRDLLEVQAPTGIVPIPKAMLKII 386



 Score = 40.0 bits (92), Expect(2) = 6e-07
 Identities = 29/110 (26%), Positives = 46/110 (41%)
 Frame = -1

Query: 491 SWKQLVSQGEQTESLVVRLKTENSLFNGPRHERFNPRAPNQALRPKEKDTMATESTXXXX 312
           +WK+L+ QGEQ E++  +   +             P AP    R + K+ MA +      
Sbjct: 211 TWKELIRQGEQVENMTKKGVAK-------------PSAPKNPPRTRGKEIMAVDFAPVPK 257

Query: 311 XXXXXPRRTNASGPAWVEKQYTFKDENVVPLFKLLQKCNKLKLPDPKK*E 162
                  R     P    +QY F+++ VV     L K N++KL +  K E
Sbjct: 258 PVQRPKPRPFEQLP---PRQYDFREDQVVETLNTLLKSNRIKLSEVTKPE 304


>ref|XP_020258335.1| uncharacterized protein LOC109834719 [Asparagus officinalis]
          Length = 171

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 34/110 (30%), Positives = 54/110 (49%)
 Frame = -1

Query: 491 SWKQLVSQGEQTESLVVRLKTENSLFNGPRHERFNPRAPNQALRPKEKDTMATESTXXXX 312
           +WK+LV QG++ E+++ RL+TE       + E   P AP    R + K+ M  +ST    
Sbjct: 21  TWKELVRQGKKVENMIKRLETEEP---HSKKEAIEPSAPKNPSRTRGKEIMIVDSTPPPK 77

Query: 311 XXXXXPRRTNASGPAWVEKQYTFKDENVVPLFKLLQKCNKLKLPDPKK*E 162
                  R     P    +QY F+++ VV     L K +++KLP+  K E
Sbjct: 78  PAKRPKPRPFEQHP---PRQYNFREDQVVATLDTLIKSSRIKLPEVTKPE 124


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