BLASTX nr result

ID: Ophiopogon22_contig00034298 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00034298
         (410 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020270045.1| pentatricopeptide repeat-containing protein ...    75   3e-13
gb|ONK66118.1| uncharacterized protein A4U43_C06F4330 [Asparagus...    75   4e-13
gb|ONK61171.1| uncharacterized protein A4U43_C08F26960 [Asparagu...    44   1e-07
ref|XP_010917211.1| PREDICTED: pentatricopeptide repeat-containi...    56   2e-06
ref|XP_008786659.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06

>ref|XP_020270045.1| pentatricopeptide repeat-containing protein At2g06000-like
           [Asparagus officinalis]
          Length = 418

 Score = 75.5 bits (184), Expect = 3e-13
 Identities = 39/53 (73%), Positives = 45/53 (84%)
 Frame = +1

Query: 1   INTIVSLLFKAGMPGEAKRIMELASGKDTGSDVSPSKEIPSLLTKGANVSVAV 159
           +N  VSLL KAGMP EAKRI+E+ASGK+ G D+S SKEIPSLLTK A+VSVAV
Sbjct: 366 VNNFVSLLLKAGMPSEAKRIVEIASGKNMGLDLSLSKEIPSLLTKRADVSVAV 418


>gb|ONK66118.1| uncharacterized protein A4U43_C06F4330 [Asparagus officinalis]
          Length = 550

 Score = 75.5 bits (184), Expect = 4e-13
 Identities = 39/53 (73%), Positives = 45/53 (84%)
 Frame = +1

Query: 1   INTIVSLLFKAGMPGEAKRIMELASGKDTGSDVSPSKEIPSLLTKGANVSVAV 159
           +N  VSLL KAGMP EAKRI+E+ASGK+ G D+S SKEIPSLLTK A+VSVAV
Sbjct: 498 VNNFVSLLLKAGMPSEAKRIVEIASGKNMGLDLSLSKEIPSLLTKRADVSVAV 550


>gb|ONK61171.1| uncharacterized protein A4U43_C08F26960 [Asparagus officinalis]
          Length = 244

 Score = 44.3 bits (103), Expect(2) = 1e-07
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +1

Query: 1   INTIVSLLFKAGMPGEAKRIMELASGKDTG 90
           +NT + LLFK+GMP EA RIM +A GK+TG
Sbjct: 189 VNTFILLLFKSGMPSEANRIMNIALGKNTG 218



 Score = 38.9 bits (89), Expect(2) = 1e-07
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +3

Query: 66  ISIREGYWIGCITIEGNSFIINKGCKCFSCRIVS 167
           I++ +     C+ IEG+SFII+K C+C SC I S
Sbjct: 211 IALGKNTGFACVDIEGSSFIIDKECRCLSCCIAS 244


>ref|XP_010917211.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Elaeis guineensis]
          Length = 544

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 26/53 (49%), Positives = 39/53 (73%)
 Frame = +1

Query: 1   INTIVSLLFKAGMPGEAKRIMELASGKDTGSDVSPSKEIPSLLTKGANVSVAV 159
           ++++VS L KAG+P E  RIM +ASG+D G D+S SKE PS L +  +++VA+
Sbjct: 492 VSSLVSCLLKAGLPNEVNRIMLIASGRDLGLDISSSKESPSSLGQSPDITVAM 544


>ref|XP_008786659.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Phoenix dactylifera]
 ref|XP_017696173.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Phoenix dactylifera]
          Length = 546

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = +1

Query: 1   INTIVSLLFKAGMPGEAKRIMELASGKDTGSDVSPSKEIPSLLTKGANVSVAV 159
           ++++VS L KAG+P E  RIM +A G+D G D+S S+E PS L K  ++SV V
Sbjct: 494 VSSLVSCLLKAGLPNEVNRIMLIAWGRDLGLDISSSEESPSSLRKSLDISVVV 546


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