BLASTX nr result

ID: Ophiopogon22_contig00034038 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00034038
         (407 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017115237.1| PREDICTED: golgin subfamily A member 6-like ...    56   2e-06
ref|XP_006422279.1| DEAD-box ATP-dependent RNA helicase 42 [Citr...    55   7e-06
ref|XP_020322357.1| trichohyalin-like, partial [Oncorhynchus kis...    54   8e-06

>ref|XP_017115237.1| PREDICTED: golgin subfamily A member 6-like protein 22 [Drosophila
           elegans]
          Length = 690

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 30/130 (23%), Positives = 63/130 (48%)
 Frame = +2

Query: 14  QKKLISKTRVEKSHYPDRSRKISEKKQREKSIRAQRDRK*SKTKPEDPHQNQDLHRFADR 193
           +K++  K R E+    ++ ++  EKK+RE+ I  QR R+  K + E   Q +D  +  + 
Sbjct: 483 EKEMQDKKREEQREIEEKKKRQEEKKRREREIEEQRKREDEKKREEKKRQEEDERKRKEE 542

Query: 194 RQSKPKEILKRKNNKTSTNQSKISTKSSRIMSSNTNGNRREVDNNQPRRIKEIRTQRNTL 373
            + K KE  +RK  K    + +   K  R    N    +++ +  + +R KE   +    
Sbjct: 543 EEKKRKEDEERKGKKKKKKRKEEEEKKERRRRKNGKKKKKKKERRRRKRRKEEEEKEGKK 602

Query: 374 QPQRERERER 403
           + ++E ++++
Sbjct: 603 RKKKEGKKKK 612


>ref|XP_006422279.1| DEAD-box ATP-dependent RNA helicase 42 [Citrus clementina]
 ref|XP_006493760.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Citrus
           sinensis]
 gb|ESR35519.1| hypothetical protein CICLE_v10004206mg [Citrus clementina]
          Length = 1110

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
 Frame = +2

Query: 62  DRSRKISEKKQREKSIRAQRDRK*SKTKPEDPHQNQ---DLHRFADRRQSKPKEILKRKN 232
           DR R+  ++K REKS R++R++  S    ED H  +   D HR  DRR+ + ++  K + 
Sbjct: 7   DRDREKEKEKHREKSRRSEREQ--STDSDEDKHDKEKEKDKHRDRDRRRDRDRDREKERE 64

Query: 233 NKTSTNQSKISTKSSRIMSSNTNGNRREVDNNQPRRIKEIRTQRNTLQPQRERERERD 406
            K    + K   +  R        +R   D  + R  +  R +R+  + +RERER+RD
Sbjct: 65  EKRERAREKEREREKR--------DREREDRERERERERERRERDREREKRERERDRD 114


>ref|XP_020322357.1| trichohyalin-like, partial [Oncorhynchus kisutch]
          Length = 464

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 30/125 (24%), Positives = 64/125 (51%)
 Frame = +2

Query: 32  KTRVEKSHYPDRSRKISEKKQREKSIRAQRDRK*SKTKPEDPHQNQDLHRFADRRQSKPK 211
           + R E+    +R+R+  E+++RE+  R +R+ K  + + E   + +      +RR+++ +
Sbjct: 164 RERSERESERERAREERERREREREERRKREEKRERAREERERERERKREERERRRARER 223

Query: 212 EILKRKNNKTSTNQSKISTKSSRIMSSNTNGNRREVDNNQPRRIKEIRTQRNTLQPQRER 391
           E  +R+  K    + K   ++ R         +RE +  +  R +E + +R   + +RER
Sbjct: 224 ERERRRERKREERERK--ERAERERKRERERGKREREREERERERERKRERERERRERER 281

Query: 392 ERERD 406
           ERER+
Sbjct: 282 ERERE 286


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