BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00032060
         (531 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKU75288.1| Retrovirus-related Pol polyprotein from transposo...   214   1e-61
gb|PRQ16309.1| putative RNA-directed DNA polymerase [Rosa chinen...   206   2e-61
gb|PKU65026.1| Retrovirus-related Pol polyprotein from transposo...   213   1e-60
gb|PKU77708.1| Retrovirus-related Pol polyprotein from transposo...   211   2e-60
gb|PKU76715.1| Retrovirus-related Pol polyprotein from transposo...   212   3e-60
gb|PKU76601.1| Retrovirus-related Pol polyprotein from transposo...   211   5e-60
gb|PKU87110.1| Retrovirus-related Pol polyprotein from transposo...   211   5e-60
gb|PKU77029.1| Retrovirus-related Pol polyprotein from transposo...   209   9e-60
gb|PKU68003.1| Retrovirus-related Pol polyprotein from transposo...   208   2e-59
gb|PKU59088.1| Retrovirus-related Pol polyprotein from transposo...   207   6e-59
gb|PKU63556.1| Retrovirus-related Pol polyprotein from transposo...   204   9e-59
gb|PKU77855.1| Retrovirus-related Pol polyprotein from transposo...   207   1e-58
gb|PRQ42184.1| putative RNA-directed DNA polymerase [Rosa chinen...   206   2e-58
gb|PKU88027.1| Retrovirus-related Pol polyprotein from transposo...   206   3e-58
gb|PKU75882.1| Retrovirus-related Pol polyprotein from transposo...   206   3e-58
gb|PKU76067.1| Retrovirus-related Pol polyprotein from transposo...   204   9e-58
gb|PKU70687.1| Retrovirus-related Pol polyprotein from transposo...   189   1e-57
gb|PKU74901.1| Retrovirus-related Pol polyprotein from transposo...   202   3e-57
gb|PKU64810.1| Retrovirus-related Pol polyprotein from transposo...   202   4e-57
gb|PKA49422.1| Retrovirus-related Pol polyprotein from transposo...   195   5e-57

>gb|PKU75288.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 969

 Score =  214 bits (546), Expect = 1e-61
 Identities = 96/176 (54%), Positives = 125/176 (71%)
 Frame = -1

Query: 528 LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
           L+H DVWGP   PS  G+ YYVSFID++SKY WVYP+  KS+V + F+ F+ L E  F +
Sbjct: 121 LVHADVWGPFQTPSNKGYKYYVSFIDDFSKYTWVYPLFRKSEVFNKFVEFQHLTERQFNT 180

Query: 348 RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
           +I  LRTDNGGEF++  F    T +GI+HQ SC H+P QN +AERKH HL+ETT TLL  
Sbjct: 181 KIHILRTDNGGEFINDKFKIFCTQTGIIHQSSCPHSPSQNGVAERKHRHLIETTRTLLLE 240

Query: 168 ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
           A++P     D + TAT+LINRLPSP   +KSP+E+L+    DY+ LR+FG LC+PW
Sbjct: 241 ASLPHFLWVDTMLTATFLINRLPSPNTQNKSPYELLYHTQPDYKNLRVFGCLCYPW 296


>gb|PRQ16309.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 461

 Score =  206 bits (524), Expect = 2e-61
 Identities = 97/176 (55%), Positives = 125/176 (71%)
 Frame = -1

Query: 528 LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
           +IH DVWGPTS+ SVSGF YYV FID++S++ W++P+  KS+V   F  FK LVEN F +
Sbjct: 151 IIHSDVWGPTSILSVSGFKYYVLFIDDWSRFTWLFPLHCKSEVFHSFQKFKLLVENQFDT 210

Query: 348 RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
           +I++LR DNGGE+ SA F   L+++GI  Q SC HTP+QN +AERKH HL+E T TL   
Sbjct: 211 KIKSLRCDNGGEYTSAVFQSFLSNNGIAQQFSCPHTPEQNGMAERKHRHLIELTRTLFAQ 270

Query: 168 ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
           +++PF Y  + + T+ YLINRLPS  L   SPFE LF    DY FLR +G LCFPW
Sbjct: 271 SSLPFKYWVEIVQTSVYLINRLPSSSLHFISPFEQLFNTAPDYNFLRAYGCLCFPW 326


>gb|PKU65026.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 1143

 Score =  213 bits (541), Expect = 1e-60
 Identities = 98/176 (55%), Positives = 123/176 (69%)
 Frame = -1

Query: 528  LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
            LIH DVWGP    S  G+ YYVSFID++SK+ WVYP+ +KSDV S F+ F++  E  F+ 
Sbjct: 492  LIHSDVWGPVQTGSNQGYFYYVSFIDDFSKFTWVYPLIHKSDVFSKFIEFQNYAERQFSR 551

Query: 348  RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
            RI  LRTDNGGE+++  F  +   +GI+HQ SC HTP QN +AERKH HL+ETT  LL  
Sbjct: 552  RIHILRTDNGGEYINNKFKTLCNHNGIIHQTSCPHTPSQNGVAERKHRHLIETTRALLLQ 611

Query: 168  ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
            A++P     D L TATYLINRLPSP    KSP++ILF +  DY  LR+FG LC+PW
Sbjct: 612  ASVPQALWVDTLLTATYLINRLPSPNTHQKSPYKILFNRTPDYTHLRVFGCLCYPW 667


>gb|PKU77708.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 885

 Score =  211 bits (536), Expect = 2e-60
 Identities = 96/177 (54%), Positives = 127/177 (71%)
 Frame = -1

Query: 531 ALIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFT 352
           +LIH DVWGP  V S SGF +YVSFID++SK+ WV+PI NKS+VL+ F  F++L+   F 
Sbjct: 27  SLIHSDVWGPFPVTSNSGFRFYVSFIDDFSKFTWVFPITNKSEVLNKFNEFQNLIARQFN 86

Query: 351 SRIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQ 172
           ++I+ LR+DNGGEF +  F     S+GI+HQ SC +TP QN +AERK+ H++ET  TLL 
Sbjct: 87  TKIKILRSDNGGEFSNKNFINYCNSNGIIHQTSCPYTPSQNGVAERKYRHIIETARTLLT 146

Query: 171 HATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
            A +P H+  D + TA +LINRLPSP    KSP+EILF K  DY  LR++G LC+PW
Sbjct: 147 QAALPHHFWVDTVLTANHLINRLPSPNTQFKSPYEILFSKPPDYSQLRVYGCLCYPW 203


>gb|PKU76715.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 1385

 Score =  212 bits (539), Expect = 3e-60
 Identities = 96/176 (54%), Positives = 125/176 (71%)
 Frame = -1

Query: 528  LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
            L+H DVWGP+ +PS SGF YYVSFID++SKY W+YP+  KSDV   FL F  ++E  F +
Sbjct: 527  LVHSDVWGPSHIPSNSGFRYYVSFIDDFSKYTWIYPLLQKSDVFYKFLEFTKMIERQFQT 586

Query: 348  RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
             I+ LRTD GGEF++  F   L + GILHQ +C +TP QN +AERKH H+ ETT TLL  
Sbjct: 587  HIRKLRTDGGGEFINNKFKNYLNTQGILHQFTCPYTPSQNGVAERKHRHITETTRTLLLE 646

Query: 168  ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
            A++P +   D L TA +LINRLPSP   +KSP EIL+ +  DY  L++FG+LC+PW
Sbjct: 647  ASLPTYLWVDTLLTAVHLINRLPSPNTHNKSPHEILYQEPPDYTNLKVFGSLCYPW 702


>gb|PKU76601.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 1385

 Score =  211 bits (537), Expect = 5e-60
 Identities = 95/176 (53%), Positives = 125/176 (71%)
 Frame = -1

Query: 528  LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
            L+H DVWGP+ + S  GF YYVSFID++SKY W+YP+  KSDV   FL F+ ++E  F +
Sbjct: 527  LVHSDVWGPSQITSNYGFRYYVSFIDDFSKYTWIYPLLQKSDVFYKFLEFQRMIERQFQT 586

Query: 348  RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
             I+ LRTD GGEF++  F   LT+ GILHQ +C +TP QN +AERKH H+ ETT TLL  
Sbjct: 587  HIRKLRTDGGGEFINNKFKTYLTAQGILHQFTCPYTPSQNGVAERKHRHITETTRTLLLE 646

Query: 168  ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
            A +P +   D L TA +LINRLPSP   +KSP+EIL+ +  DY  L++FG+LC+PW
Sbjct: 647  ALLPTYLWVDTLLTAVHLINRLPSPNTHNKSPYEILYQEPPDYTHLKVFGSLCYPW 702


>gb|PKU87110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 1345

 Score =  211 bits (537), Expect = 5e-60
 Identities = 93/177 (52%), Positives = 128/177 (72%)
 Frame = -1

Query: 531  ALIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFT 352
            +L+H DVWGP    S+ G+ +YVSF+D+++K+ WVYP+ +KSDV S F+ F+++VE  F 
Sbjct: 493  SLVHSDVWGPAPTVSLRGYKFYVSFVDDFTKFTWVYPLIHKSDVFSTFIEFQNMVERQFN 552

Query: 351  SRIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQ 172
             +I  LR+DNGGEF++  F  +   +GI+HQ++C H+P QN +AERKH HL+ETT TLL 
Sbjct: 553  RKIMILRSDNGGEFLNKKFQTLFKLNGIIHQLTCPHSPSQNGVAERKHRHLMETTRTLLI 612

Query: 171  HATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
             A++P H   D L TA YLIN+LPS    HKSP+E+LF K   Y+ LRIFG LC+PW
Sbjct: 613  QASIPQHLWVDTLLTAAYLINQLPSSNTHHKSPYELLFGKTPSYERLRIFGCLCYPW 669


>gb|PKU77029.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 863

 Score =  209 bits (531), Expect = 9e-60
 Identities = 96/176 (54%), Positives = 125/176 (71%)
 Frame = -1

Query: 528 LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
           L+H DVWGP    S  GF YYVSFID+YSKY W+YP+  KSDV + FL FK +VE  F +
Sbjct: 22  LVHSDVWGPVQSISNYGFRYYVSFIDDYSKYTWIYPLLQKSDVFTKFLEFKKMVEVQFQT 81

Query: 348 RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
           +I+ +RTD GGEF++  F   L + GILHQ +C +TP QN +AERKH H+ ETT TLL  
Sbjct: 82  QIRKIRTDGGGEFINNKFKTYLATQGILHQFTCPYTPSQNGVAERKHRHITETTRTLLIE 141

Query: 168 ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
           A++P +   D L TA YLIN+LPSP   +KSP EIL+ +  +YQ L++FG+LC+PW
Sbjct: 142 ASLPSYLWVDTLLTAVYLINKLPSPNTHNKSPHEILYQEPPNYQNLKVFGSLCYPW 197


>gb|PKU68003.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 878

 Score =  208 bits (529), Expect = 2e-59
 Identities = 91/177 (51%), Positives = 123/177 (69%)
 Frame = -1

Query: 531 ALIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFT 352
           A++H D+WGP S     G+ YYVSFID++SKY W+YP+ +KS+V S F+ F+  VE  F 
Sbjct: 21  AVVHSDIWGPFSSVPAQGYRYYVSFIDDFSKYTWIYPLVHKSEVFSKFIEFQKFVERQFN 80

Query: 351 SRIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQ 172
             IQ +RTDNGGE+V+  F     ++GI HQ++C HTP QN +AERKH HL+ETT  LL 
Sbjct: 81  KTIQIIRTDNGGEYVNKQFQTHCKTTGISHQVTCPHTPSQNGVAERKHRHLIETTRALLI 140

Query: 171 HATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
            A++P +   + L TA YLINR+PSP  +HKSP+E+L  K  DY  L++ G LC+PW
Sbjct: 141 QASLPLYLWVNTLLTANYLINRMPSPNTSHKSPYELLHNKQPDYNHLKVLGCLCYPW 197


>gb|PKU59088.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 891

 Score =  207 bits (526), Expect = 6e-59
 Identities = 98/176 (55%), Positives = 120/176 (68%)
 Frame = -1

Query: 528  LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
            LIHFDVWGP    S  G+ YYVSFID++SK+ WVYP+ +KS V + FL F+   E+ F+ 
Sbjct: 523  LIHFDVWGPVQTGSNQGYFYYVSFIDDFSKFTWVYPLIHKSYVFAKFLEFQHYAEHQFSQ 582

Query: 348  RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
            RI  LRTDNGGE+++  F  +    GI+HQ SC HTP QN + +RKH HL+ETT TLL  
Sbjct: 583  RIHILRTDNGGEYINNKFKTLCNHHGIIHQTSCPHTPFQNGVTKRKHRHLIETTRTLLLQ 642

Query: 168  ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
            A++P     D L TATYLINRLPSP    KSP EILF    DY  LR+FG LC+PW
Sbjct: 643  ASVPHALWVDTLLTATYLINRLPSPNTHQKSPNEILFNTPPDYTHLRVFGCLCYPW 698


>gb|PKU63556.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 715

 Score =  204 bits (519), Expect = 9e-59
 Identities = 92/177 (51%), Positives = 121/177 (68%)
 Frame = -1

Query: 531 ALIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFT 352
           AL+H D+WGP S+PS  GF YY+SFID++SK+ W+YPI NKS+  S F+ F+  VE  F+
Sbjct: 21  ALVHSDIWGPFSIPSSHGFRYYISFIDDFSKFTWIYPIINKSEAFSKFIEFQKSVERQFS 80

Query: 351 SRIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQ 172
             I+ +RTDNGGE+++  F     S+GI HQ +C H+P QN +AERKH HL+ETT  LL 
Sbjct: 81  CNIKIIRTDNGGEYMNYKFKTYCASTGIDHQSTCPHSPSQNGVAERKHIHLIETTRALLI 140

Query: 171 HATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
            A++P     D L TA YLINR+PS    HKSPFEIL  +   Y  L++ G LC+PW
Sbjct: 141 QASLPLSLWVDVLLTANYLINRIPSSNTNHKSPFEILHGQPPRYDHLKVLGCLCYPW 197


>gb|PKU77855.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 1360

 Score =  207 bits (527), Expect = 1e-58
 Identities = 94/175 (53%), Positives = 131/175 (74%)
 Frame = -1

Query: 528  LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
            L+H DVWGP    S SGF YYVSFID+Y+++ W++PIK KS+V  +FLSFK+ +EN+ ++
Sbjct: 509  LLHSDVWGPAPQISNSGFLYYVSFIDDYTRFTWLFPIKQKSEVTDIFLSFKTYIENLLST 568

Query: 348  RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
            +I+ +RTD GGE++   FT +L + GI HQ+SC +TP+QN +AERKH HL+ETT TLL  
Sbjct: 569  KIKCIRTDGGGEYMCKRFTNLLNNYGISHQVSCPYTPEQNGVAERKHRHLLETTRTLLYT 628

Query: 168  ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFP 4
            A++P  +  DA+ TATYLINR+PSP  ++KSP+E+L  +  +Y  LR FG  CFP
Sbjct: 629  ASVPTSFWPDAVLTATYLINRMPSPNTSNKSPYELLHQRQPEYAHLRTFGCACFP 683


>gb|PRQ42184.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1024

 Score =  206 bits (524), Expect = 2e-58
 Identities = 97/176 (55%), Positives = 125/176 (71%)
 Frame = -1

Query: 528 LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
           +IH DVWGPTS+ SVSGF YYV FID++S++ W++P+  KS+V   F  FK LVEN F +
Sbjct: 151 IIHSDVWGPTSILSVSGFKYYVLFIDDWSRFTWLFPLHCKSEVFHSFQKFKLLVENQFDT 210

Query: 348 RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
           +I++LR DNGGE+ SA F   L+++GI  Q SC HTP+QN +AERKH HL+E T TL   
Sbjct: 211 KIKSLRCDNGGEYTSAVFQSFLSNNGIAQQFSCPHTPEQNGMAERKHRHLIELTRTLFAQ 270

Query: 168 ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
           +++PF Y  + + T+ YLINRLPS  L   SPFE LF    DY FLR +G LCFPW
Sbjct: 271 SSLPFKYWVEIVQTSVYLINRLPSSSLHFISPFEQLFNTAPDYNFLRAYGCLCFPW 326


>gb|PKU88027.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 1150

 Score =  206 bits (524), Expect = 3e-58
 Identities = 96/175 (54%), Positives = 127/175 (72%)
 Frame = -1

Query: 528  LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
            LIH DVWGP    S SG  YYV FID+YS++ W++P++ KS+V ++F++FKS +EN  +S
Sbjct: 501  LIHSDVWGPAPALSNSGMLYYVLFIDDYSRFTWLFPMRQKSEVFNIFVNFKSYIENFTSS 560

Query: 348  RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
            +I+ LRTD GGEFVS   +  L   GILHQISC +TPKQN +AERKH H++ETT +LL  
Sbjct: 561  KIKCLRTDGGGEFVSTSLSQFLKQHGILHQISCPYTPKQNGVAERKHRHVIETTRSLLDT 620

Query: 168  ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFP 4
            A++P+ Y  DA+ TATYLINR+PSP   + SP+E+L  K   Y  LR FG+ CFP
Sbjct: 621  ASVPYKYWPDAVLTATYLINRIPSPNTDNVSPYELLNHKAPSYAHLRTFGSACFP 675


>gb|PKU75882.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 1390

 Score =  206 bits (524), Expect = 3e-58
 Identities = 91/176 (51%), Positives = 127/176 (72%)
 Frame = -1

Query: 528  LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
            L+H DVWGP+   S  G+ YYVSFID +SK+ WVYP+ +KS+V   F  F+ +++  F +
Sbjct: 533  LVHSDVWGPSPSTSCQGYRYYVSFIDNFSKFTWVYPLIHKSEVFQKFCEFQKMIKCQFKT 592

Query: 348  RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
             I+ LRTD GGEF++  FT +L + GI+HQ +C ++P QN +AERKH HL ET  +LL  
Sbjct: 593  DIRILRTDGGGEFINNKFTALLKNLGIIHQFTCPYSPPQNGVAERKHRHLAETIRSLLLE 652

Query: 168  ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
            A++P  +  D L TATYLINRLPSP  +HKSP+EIL+ +  +Y+FL++FG LC+PW
Sbjct: 653  ASLPHTFWVDTLFTATYLINRLPSPNTSHKSPYEILYRRSPNYKFLKVFGCLCYPW 708


>gb|PKU76067.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 1362

 Score =  204 bits (520), Expect = 9e-58
 Identities = 90/175 (51%), Positives = 130/175 (74%)
 Frame = -1

Query: 528  LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
            L+H DVWGP  V S SG+ YYV FID+ +++ W++P+++KS+V ++F++FKS +E + + 
Sbjct: 509  LLHSDVWGPAPVKSNSGYLYYVLFIDDCTRFTWLFPMQHKSEVSNIFITFKSYIEKLTSR 568

Query: 348  RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
            +I+++RTD GGE+V+  FT  L   GI HQISC HTP+QN ++ERKH HL+ETT TL+  
Sbjct: 569  KIKSIRTDGGGEYVNHAFTRFLQLHGISHQISCPHTPEQNGVSERKHRHLIETTRTLMHT 628

Query: 168  ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFP 4
            A++P+ Y  DA+ TATYL+NR+PSP    KSPFE+   ++ DY+ LR FG  CFP
Sbjct: 629  ASVPYSYWPDAVLTATYLVNRMPSPNTNGKSPFELFHHRVPDYEHLRTFGCACFP 683


>gb|PKU70687.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 212

 Score =  189 bits (479), Expect = 1e-57
 Identities = 88/171 (51%), Positives = 121/171 (70%)
 Frame = -1

Query: 528 LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
           +IH DVWGP    S +G  YYV FID+Y+++ W++PI++KS+V  +F +FKS +EN+ +S
Sbjct: 40  VIHSDVWGPAPTASNTGMLYYVLFIDDYTRFTWLFPIRHKSEVALIFSNFKSYIENLTSS 99

Query: 348 RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
           +I+ LR D GGEFV+  F   L   GI HQISC +TP+QN IAERKH H++ETT +LL  
Sbjct: 100 KIKCLRKDGGGEFVNNSFAQFLQKHGIAHQISCPYTPEQNGIAERKHRHIIETTRSLLDI 159

Query: 168 ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGA 16
           +++P+ Y  DA+ TATYLINR+PSP     SP+E+L  K   Y  LR FG+
Sbjct: 160 SSVPYKYWPDAVLTATYLINRMPSPNTDKVSPYELLHHKAPSYDHLRTFGS 210


>gb|PKU74901.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 879

 Score =  202 bits (513), Expect = 3e-57
 Identities = 92/177 (51%), Positives = 119/177 (67%)
 Frame = -1

Query: 531 ALIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFT 352
           AL+H D+WGP S+PS  GF YY+SFID++SK+ W+YPI NKS+  S F+ F+  VE  F 
Sbjct: 21  ALVHSDIWGPFSIPSSHGFRYYISFIDDFSKFTWIYPIINKSEAFSKFIEFQKSVERQFG 80

Query: 351 SRIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQ 172
             I+ +RTDNGGE+++  F     S+GI HQ +C H+P QN +AERKH HL+ETT  LL 
Sbjct: 81  CNIKIIRTDNGGEYMNLKFKTYCASTGIDHQSTCPHSPSQNGVAERKHRHLIETTRALLI 140

Query: 171 HATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
            A +P     D L TA YLINR+PS    HKSPFEIL  +   Y  L++ G LC+PW
Sbjct: 141 QAFLPLSLWVDVLLTANYLINRIPSSNTNHKSPFEILHGQPPRYDHLKVLGCLCYPW 197


>gb|PKU64810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 1370

 Score =  202 bits (515), Expect = 4e-57
 Identities = 93/175 (53%), Positives = 125/175 (71%)
 Frame = -1

Query: 528  LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
            LIH DVWGP  + S SGF YYV FID+YS++ W++P+K KS+V ++F+SFK+ VEN+ + 
Sbjct: 512  LIHSDVWGPAPMVSNSGFLYYVIFIDDYSRFTWLFPMKQKSEVFNIFVSFKAQVENLTSH 571

Query: 348  RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
            +I+ LRTD GGE+++  F   L   GI HQ SC +TP+QN +AERKH H+VETT TLL  
Sbjct: 572  KIKRLRTDGGGEYLNKSFNHFLKLHGITHQTSCPYTPEQNGVAERKHRHIVETTRTLLHK 631

Query: 168  ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFP 4
            A++P+ Y  D + T+TYLINR+PSP   + SPFE+      +Y  LRIFG  CFP
Sbjct: 632  ASVPYKYWPDTVITSTYLINRMPSPNTHNMSPFELFHKSKPNYDHLRIFGCACFP 686


>gb|PKA49422.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 494

 Score =  195 bits (496), Expect = 5e-57
 Identities = 90/176 (51%), Positives = 125/176 (71%)
 Frame = -1

Query: 528 LIHFDVWGPTSVPSVSGFHYYVSFIDEYSKYCWVYPIKNKSDVLSVFLSFKSLVENMFTS 349
           LI+ D+WGP  + S  GF YYV F+D +SK+ W++P+K KSD++ +FL+F++ VE  F  
Sbjct: 109 LIYSDIWGPAPIISNEGFSYYVIFVDNFSKFTWLFPMKRKSDLIDIFLNFQNHVERFFNC 168

Query: 348 RIQTLRTDNGGEFVSAGFTFILTSSGILHQISCLHTPKQNDIAERKHYHLVETTITLLQH 169
           +I++  +D GGE+ +      L SSGI+HQ+SC HTP+QND AERKH H++ETT+ LLQH
Sbjct: 169 KIRSFHSDWGGEYQALHRH--LYSSGIIHQVSCPHTPEQNDSAERKHRHIIETTLALLQH 226

Query: 168 ATMPFHYSADALCTATYLINRLPSPRLAHKSPFEILFPKISDYQFLRIFGALCFPW 1
           A+ P  +   A  TA YLINRLP+P L H +P + L+ +I DY FLRIFG  C+PW
Sbjct: 227 ASAPQKFWDAAAQTAVYLINRLPTPILHHITPLQKLYGRIPDYNFLRIFGCACYPW 282