BLASTX nr result

ID: Ophiopogon22_contig00031110 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00031110
         (436 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK68125.1| uncharacterized protein A4U43_C05F7700 [Asparagus...   102   5e-25

>gb|ONK68125.1| uncharacterized protein A4U43_C05F7700 [Asparagus officinalis]
          Length = 145

 Score =  102 bits (254), Expect = 5e-25
 Identities = 61/113 (53%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
 Frame = -2

Query: 429 KSSECDTSSKLSQHSCSAVS-CAEGSHRTREANNCQPPNLETASKILKVKSRGSRTFSEH 253
           K+SE D S + ++HS  AVS CAEGSHR ++  NCQ PNLE  S   K K++     SEH
Sbjct: 9   KASEHDKSGESNRHSSLAVSSCAEGSHRMKDTYNCQTPNLENTS---KAKAKRLHRRSEH 65

Query: 252 ---SSRLIQSSSTLPSAVHSKPLKDTDDRRPSNVADAPKNLMATRKRQRDDVD 103
                RL  S+ST PSA  SK L + DD RP  + +APKNLMATRKRQRDDV+
Sbjct: 66  GKSGGRLSPSASTFPSAAESKLLNEKDDGRP-QIRNAPKNLMATRKRQRDDVE 117


Top