BLASTX nr result
ID: Ophiopogon22_contig00031109
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00031109
(490 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020247486.1| LOW QUALITY PROTEIN: DNA mismatch repair pro... 171 4e-46
ref|XP_019705613.1| PREDICTED: DNA mismatch repair protein MSH1,... 167 6e-45
ref|XP_010918844.1| PREDICTED: DNA mismatch repair protein MSH1,... 167 7e-45
ref|XP_008809666.1| PREDICTED: DNA mismatch repair protein MSH1,... 165 3e-44
gb|AIU48189.1| MSH1, partial [Yucca filamentosa] 164 7e-44
gb|AIU48177.1| MSH1, partial [Asparagus officinalis] 164 7e-44
ref|XP_020084562.1| DNA mismatch repair protein MSH1, mitochondr... 159 3e-42
ref|XP_020084561.1| DNA mismatch repair protein MSH1, mitochondr... 159 3e-42
ref|XP_020084560.1| DNA mismatch repair protein MSH1, mitochondr... 159 3e-42
gb|AIU48204.1| MSH1, partial [Trachycarpus fortunei] 157 1e-41
ref|XP_010264855.1| PREDICTED: DNA mismatch repair protein MSH1,... 157 3e-41
ref|XP_019054220.1| PREDICTED: DNA mismatch repair protein MSH1,... 157 3e-41
ref|XP_010264854.1| PREDICTED: DNA mismatch repair protein MSH1,... 157 3e-41
ref|XP_010264853.1| PREDICTED: DNA mismatch repair protein MSH1,... 157 3e-41
ref|XP_019054219.1| PREDICTED: DNA mismatch repair protein MSH1,... 157 3e-41
gb|PKA56534.1| DNA mismatch repair protein MSH1, mitochondrial [... 154 2e-40
gb|AIU48188.1| MSH1, partial [Dioscorea oppositifolia] 153 5e-40
gb|AIU48198.1| MSH1, partial [Cinnamomum camphora] 150 9e-40
gb|PIA40037.1| hypothetical protein AQUCO_02500037v1 [Aquilegia ... 151 2e-39
ref|XP_021896915.1| DNA mismatch repair protein MSH1, mitochondr... 148 8e-39
>ref|XP_020247486.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MSH1, mitochondrial
[Asparagus officinalis]
Length = 1125
Score = 171 bits (432), Expect = 4e-46
Identities = 83/100 (83%), Positives = 91/100 (91%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PSTVG SSIY+LFRPDKKLYVGQTDDL GRIRAHRSKEGM+SA+FLY++VPGK+ + LE
Sbjct: 1026 PSTVGASSIYILFRPDKKLYVGQTDDLSGRIRAHRSKEGMRSALFLYILVPGKASQANLE 1085
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLETPSLHQ 302
TLLINQLPLQGFRLANKADGKHRNFG TS LTLE+ SL Q
Sbjct: 1086 TLLINQLPLQGFRLANKADGKHRNFGTTSNLTLESLSLRQ 1125
>ref|XP_019705613.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2
[Elaeis guineensis]
Length = 892
Score = 167 bits (423), Expect = 6e-45
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PS+VGTS IYVLFRPDKKLYVGQTDDL GR+RAHRSKEGM++AVFLYVIVPGKSIASQLE
Sbjct: 794 PSSVGTSCIYVLFRPDKKLYVGQTDDLVGRVRAHRSKEGMQNAVFLYVIVPGKSIASQLE 853
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLETPSLHQ 302
TLL+NQLPL+GFRL NKADGKHRNFG TS L +E +LHQ
Sbjct: 854 TLLVNQLPLRGFRLVNKADGKHRNFG-TSRLPIEAITLHQ 892
>ref|XP_010918844.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1
[Elaeis guineensis]
Length = 1134
Score = 167 bits (423), Expect = 7e-45
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PS+VGTS IYVLFRPDKKLYVGQTDDL GR+RAHRSKEGM++AVFLYVIVPGKSIASQLE
Sbjct: 1036 PSSVGTSCIYVLFRPDKKLYVGQTDDLVGRVRAHRSKEGMQNAVFLYVIVPGKSIASQLE 1095
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLETPSLHQ 302
TLL+NQLPL+GFRL NKADGKHRNFG TS L +E +LHQ
Sbjct: 1096 TLLVNQLPLRGFRLVNKADGKHRNFG-TSRLPIEAITLHQ 1134
>ref|XP_008809666.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Phoenix
dactylifera]
Length = 1138
Score = 165 bits (418), Expect = 3e-44
Identities = 84/100 (84%), Positives = 90/100 (90%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PSTVGTSSIYVLFRPDKKLYVGQTDDL GR+RAHRSKEGM++A FLYV+VPGKSIASQLE
Sbjct: 1040 PSTVGTSSIYVLFRPDKKLYVGQTDDLVGRVRAHRSKEGMQNAEFLYVVVPGKSIASQLE 1099
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLETPSLHQ 302
TLLIN+LPL+GFRL NKADGKHRNFG TS L E LHQ
Sbjct: 1100 TLLINELPLRGFRLVNKADGKHRNFG-TSRLPKEPVKLHQ 1138
>gb|AIU48189.1| MSH1, partial [Yucca filamentosa]
Length = 778
Score = 164 bits (414), Expect = 7e-44
Identities = 80/86 (93%), Positives = 84/86 (97%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PSTVGTSSIY+LFRPDKKLYVGQTDDL GR+ AHRSKEGMK+A+FLYVIVPGKSIASQLE
Sbjct: 693 PSTVGTSSIYILFRPDKKLYVGQTDDLLGRVHAHRSKEGMKNALFLYVIVPGKSIASQLE 752
Query: 183 TLLINQLPLQGFRLANKADGKHRNFG 260
TLLINQLPLQGFRLANKADGKHRNFG
Sbjct: 753 TLLINQLPLQGFRLANKADGKHRNFG 778
>gb|AIU48177.1| MSH1, partial [Asparagus officinalis]
Length = 791
Score = 164 bits (414), Expect = 7e-44
Identities = 78/86 (90%), Positives = 83/86 (96%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PSTVG SSIY+LFRPDKKLYVGQTDDL GRIRAHRSKEGMKSA+FLY++VPGKS+A QLE
Sbjct: 706 PSTVGASSIYILFRPDKKLYVGQTDDLSGRIRAHRSKEGMKSALFLYILVPGKSVAGQLE 765
Query: 183 TLLINQLPLQGFRLANKADGKHRNFG 260
TLLINQLPLQGFRLANKADGKHRNFG
Sbjct: 766 TLLINQLPLQGFRLANKADGKHRNFG 791
>ref|XP_020084562.1| DNA mismatch repair protein MSH1, mitochondrial isoform X3 [Ananas
comosus]
Length = 890
Score = 159 bits (403), Expect = 3e-42
Identities = 81/99 (81%), Positives = 90/99 (90%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PSTVGTSSIYVLFRPDKKLYVGQTDDL GR+RAHRSKEGM+ A LYVIVPGKSIASQLE
Sbjct: 793 PSTVGTSSIYVLFRPDKKLYVGQTDDLVGRLRAHRSKEGMQDAAALYVIVPGKSIASQLE 852
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLETPSLH 299
TLLINQLPL+GF+L +KADGKHRNFG TS+L+ E ++H
Sbjct: 853 TLLINQLPLKGFQLISKADGKHRNFG-TSSLSAEALTMH 890
>ref|XP_020084561.1| DNA mismatch repair protein MSH1, mitochondrial isoform X2 [Ananas
comosus]
Length = 1010
Score = 159 bits (403), Expect = 3e-42
Identities = 81/99 (81%), Positives = 90/99 (90%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PSTVGTSSIYVLFRPDKKLYVGQTDDL GR+RAHRSKEGM+ A LYVIVPGKSIASQLE
Sbjct: 913 PSTVGTSSIYVLFRPDKKLYVGQTDDLVGRLRAHRSKEGMQDAAALYVIVPGKSIASQLE 972
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLETPSLH 299
TLLINQLPL+GF+L +KADGKHRNFG TS+L+ E ++H
Sbjct: 973 TLLINQLPLKGFQLISKADGKHRNFG-TSSLSAEALTMH 1010
>ref|XP_020084560.1| DNA mismatch repair protein MSH1, mitochondrial isoform X1 [Ananas
comosus]
Length = 1132
Score = 159 bits (403), Expect = 3e-42
Identities = 81/99 (81%), Positives = 90/99 (90%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PSTVGTSSIYVLFRPDKKLYVGQTDDL GR+RAHRSKEGM+ A LYVIVPGKSIASQLE
Sbjct: 1035 PSTVGTSSIYVLFRPDKKLYVGQTDDLVGRLRAHRSKEGMQDAAALYVIVPGKSIASQLE 1094
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLETPSLH 299
TLLINQLPL+GF+L +KADGKHRNFG TS+L+ E ++H
Sbjct: 1095 TLLINQLPLKGFQLISKADGKHRNFG-TSSLSAEALTMH 1132
>gb|AIU48204.1| MSH1, partial [Trachycarpus fortunei]
Length = 848
Score = 157 bits (398), Expect = 1e-41
Identities = 76/88 (86%), Positives = 83/88 (94%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PSTVGTSSIYVLFRPDKKLYVGQTDDL GR+ AHRSK+GM++A FLYV+VPGKSIASQLE
Sbjct: 761 PSTVGTSSIYVLFRPDKKLYVGQTDDLVGRVHAHRSKDGMQNAQFLYVVVPGKSIASQLE 820
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGAT 266
TLLINQLPL+GFRL NKADGKHRNFG +
Sbjct: 821 TLLINQLPLRGFRLVNKADGKHRNFGTS 848
>ref|XP_010264855.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X5
[Nelumbo nucifera]
Length = 1062
Score = 157 bits (396), Expect = 3e-41
Identities = 79/95 (83%), Positives = 87/95 (91%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PST+G SS+YVL RPDKKLYVGQTDDL GR+RAHRSKEGM++A FLYVIVPGKSIASQLE
Sbjct: 966 PSTIGASSVYVLLRPDKKLYVGQTDDLEGRVRAHRSKEGMQNASFLYVIVPGKSIASQLE 1025
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLET 287
TLLINQLP QGFRL N ADGKHRNFG TS+L+LE+
Sbjct: 1026 TLLINQLPHQGFRLTNIADGKHRNFG-TSSLSLES 1059
>ref|XP_019054220.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X4
[Nelumbo nucifera]
ref|XP_019054221.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X4
[Nelumbo nucifera]
Length = 1134
Score = 157 bits (396), Expect = 3e-41
Identities = 79/95 (83%), Positives = 87/95 (91%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PST+G SS+YVL RPDKKLYVGQTDDL GR+RAHRSKEGM++A FLYVIVPGKSIASQLE
Sbjct: 1038 PSTIGASSVYVLLRPDKKLYVGQTDDLEGRVRAHRSKEGMQNASFLYVIVPGKSIASQLE 1097
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLET 287
TLLINQLP QGFRL N ADGKHRNFG TS+L+LE+
Sbjct: 1098 TLLINQLPHQGFRLTNIADGKHRNFG-TSSLSLES 1131
>ref|XP_010264854.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X3
[Nelumbo nucifera]
Length = 1139
Score = 157 bits (396), Expect = 3e-41
Identities = 79/95 (83%), Positives = 87/95 (91%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PST+G SS+YVL RPDKKLYVGQTDDL GR+RAHRSKEGM++A FLYVIVPGKSIASQLE
Sbjct: 1043 PSTIGASSVYVLLRPDKKLYVGQTDDLEGRVRAHRSKEGMQNASFLYVIVPGKSIASQLE 1102
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLET 287
TLLINQLP QGFRL N ADGKHRNFG TS+L+LE+
Sbjct: 1103 TLLINQLPHQGFRLTNIADGKHRNFG-TSSLSLES 1136
>ref|XP_010264853.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2
[Nelumbo nucifera]
Length = 1142
Score = 157 bits (396), Expect = 3e-41
Identities = 79/95 (83%), Positives = 87/95 (91%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PST+G SS+YVL RPDKKLYVGQTDDL GR+RAHRSKEGM++A FLYVIVPGKSIASQLE
Sbjct: 1046 PSTIGASSVYVLLRPDKKLYVGQTDDLEGRVRAHRSKEGMQNASFLYVIVPGKSIASQLE 1105
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLET 287
TLLINQLP QGFRL N ADGKHRNFG TS+L+LE+
Sbjct: 1106 TLLINQLPHQGFRLTNIADGKHRNFG-TSSLSLES 1139
>ref|XP_019054219.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1
[Nelumbo nucifera]
Length = 1143
Score = 157 bits (396), Expect = 3e-41
Identities = 79/95 (83%), Positives = 87/95 (91%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PST+G SS+YVL RPDKKLYVGQTDDL GR+RAHRSKEGM++A FLYVIVPGKSIASQLE
Sbjct: 1047 PSTIGASSVYVLLRPDKKLYVGQTDDLEGRVRAHRSKEGMQNASFLYVIVPGKSIASQLE 1106
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLET 287
TLLINQLP QGFRL N ADGKHRNFG TS+L+LE+
Sbjct: 1107 TLLINQLPHQGFRLTNIADGKHRNFG-TSSLSLES 1140
>gb|PKA56534.1| DNA mismatch repair protein MSH1, mitochondrial [Apostasia
shenzhenica]
Length = 1158
Score = 154 bits (390), Expect = 2e-40
Identities = 77/100 (77%), Positives = 88/100 (88%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PSTVG S +YV+FRPDKKLYVGQTDDL GR+ +HRSKEGM+ A FLYVIVPGKSIASQLE
Sbjct: 1060 PSTVGNSCVYVIFRPDKKLYVGQTDDLLGRVHSHRSKEGMEDAEFLYVIVPGKSIASQLE 1119
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLETPSLHQ 302
TLLINQLPL GFRL+NKADGKHRNFG +S ++ E +LH+
Sbjct: 1120 TLLINQLPLHGFRLSNKADGKHRNFG-SSPVSHEVLALHR 1158
>gb|AIU48188.1| MSH1, partial [Dioscorea oppositifolia]
Length = 949
Score = 153 bits (387), Expect = 5e-40
Identities = 74/88 (84%), Positives = 80/88 (90%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PSTVGTS IYV+ RPDKKLYVGQTDDL GR+ AHRSKEGM +A FLYV+VPGKS+ASQLE
Sbjct: 862 PSTVGTSCIYVILRPDKKLYVGQTDDLLGRVHAHRSKEGMANARFLYVVVPGKSVASQLE 921
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGAT 266
TLLINQLPLQGFRL NKADGKHRNFG +
Sbjct: 922 TLLINQLPLQGFRLVNKADGKHRNFGTS 949
>gb|AIU48198.1| MSH1, partial [Cinnamomum camphora]
Length = 577
Score = 150 bits (380), Expect = 9e-40
Identities = 71/88 (80%), Positives = 80/88 (90%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PST+G SSIYVL RPDKKLY+GQTDDL GR+RAHRSKEGM++ FLYV+VPGKS+ASQLE
Sbjct: 490 PSTIGASSIYVLCRPDKKLYIGQTDDLVGRVRAHRSKEGMENVTFLYVLVPGKSVASQLE 549
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGAT 266
TLLINQLP +GFRL NKADGKHRNFG +
Sbjct: 550 TLLINQLPNRGFRLVNKADGKHRNFGTS 577
>gb|PIA40037.1| hypothetical protein AQUCO_02500037v1 [Aquilegia coerulea]
Length = 1142
Score = 151 bits (382), Expect = 2e-39
Identities = 77/100 (77%), Positives = 87/100 (87%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PST+G SS+YVLFRPDKKLYVGQTDDL GR+RAHR+KEG + FLYVIVPGKSIA QLE
Sbjct: 1046 PSTIGASSVYVLFRPDKKLYVGQTDDLEGRVRAHRAKEG--NVAFLYVIVPGKSIACQLE 1103
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLETPSLHQ 302
TLLINQLP +GF+L N ADGKHRNFG TS L+LE+ +LHQ
Sbjct: 1104 TLLINQLPCRGFQLTNVADGKHRNFG-TSNLSLESLTLHQ 1142
>ref|XP_021896915.1| DNA mismatch repair protein MSH1, mitochondrial isoform X2 [Carica
papaya]
Length = 567
Score = 148 bits (373), Expect = 8e-39
Identities = 71/99 (71%), Positives = 85/99 (85%)
Frame = +3
Query: 3 PSTVGTSSIYVLFRPDKKLYVGQTDDLGGRIRAHRSKEGMKSAVFLYVIVPGKSIASQLE 182
PST+G S +YV+ RPDK+LYVGQ+DDL GR+RAHRSKEGM+SA FLY +VPGKS+A QLE
Sbjct: 470 PSTIGASCVYVMLRPDKRLYVGQSDDLEGRVRAHRSKEGMQSAAFLYFVVPGKSMACQLE 529
Query: 183 TLLINQLPLQGFRLANKADGKHRNFGATSTLTLETPSLH 299
TLLINQLP QG+ LAN ADGKHRNFG TS L+++ S+H
Sbjct: 530 TLLINQLPYQGYLLANLADGKHRNFG-TSNLSVDVMSVH 567