BLASTX nr result
ID: Ophiopogon22_contig00031039
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00031039
(748 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP36767.1| DNA-directed RNA polymerase subunit beta [Cajanus... 400 e-138
gb|APO11378.1| RNA polymerase beta subunit (chloroplast) [Behnia... 419 e-136
gb|AFB18343.1| RNA polymerase beta subunit (plastid) [Lomandra l... 419 e-136
gb|AEX94337.1| RNA polymerase beta subunit (chloroplast) [Scadox... 419 e-136
gb|AEX94359.1| RNA polymerase beta subunit (chloroplast) [Liriop... 419 e-136
gb|AEX94343.1| RNA polymerase beta subunit (chloroplast) [Asphod... 418 e-136
gb|AEX94334.1| RNA polymerase beta subunit (chloroplast) [Amaryl... 418 e-136
gb|AEX94333.1| RNA polymerase beta subunit (chloroplast) [Tulbag... 418 e-136
ref|YP_009335325.1| RNA polymerase beta subunit (chloroplast) [N... 418 e-136
ref|YP_009431210.1| RNA polymerase beta subunit (chloroplast) [M... 418 e-136
gb|AEX94357.1| RNA polymerase beta subunit (chloroplast) [Dasyli... 418 e-136
gb|AEX94356.1| RNA polymerase beta subunit (chloroplast) [Beauca... 418 e-136
gb|AFB18347.1| RNA polymerase beta subunit, partial (plastid) [N... 418 e-136
ref|YP_009431124.1| RNA polymerase beta subunit (chloroplast) [A... 418 e-136
ref|YP_009432549.1| RNA polymerase beta subunit (chloroplast) [C... 418 e-136
ref|YP_009370013.1| RNA polymerase beta subunit (chloroplast) [A... 418 e-136
gb|AEX94335.1| RNA polymerase beta subunit (chloroplast) [Crinum... 418 e-136
ref|YP_009045558.1| RNA polymerase beta subunit (chloroplast) [C... 418 e-136
ref|YP_009334482.1| RNA polymerase beta subunit (chloroplast) [A... 418 e-136
gb|AFB18323.1| RNA polymerase beta subunit, partial (plastid) [A... 418 e-136
>gb|KYP36767.1| DNA-directed RNA polymerase subunit beta [Cajanus cajan]
Length = 325
Score = 400 bits (1028), Expect = e-138
Identities = 194/219 (88%), Positives = 204/219 (93%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
T+KET LKLPIGGRGRVIDVRWIQKKGGS YNPE +R+YI QKREIKVGDKVAGRHGNKG
Sbjct: 24 TSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETVRIYISQKREIKVGDKVAGRHGNKG 83
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
I+SKILSRQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSL LA L HYRIAPF
Sbjct: 84 IVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGMLDRHYRIAPFD 143
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQT NPW+FEPE+PGKSRIFDGRTGDPFEQPV+IGK YIL
Sbjct: 144 ERYEQEASRKLVFSELYEASKQTANPWIFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYIL 203
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 204 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 242
>gb|APO11378.1| RNA polymerase beta subunit (chloroplast) [Behnia reticulata]
Length = 1070
Score = 419 bits (1078), Expect = e-136
Identities = 206/219 (94%), Positives = 212/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYILQKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYILQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 829 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKS+IFDGRTGDPFEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSKIFDGRTGDPFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>gb|AFB18343.1| RNA polymerase beta subunit (plastid) [Lomandra longifolia]
Length = 1070
Score = 419 bits (1077), Expect = e-136
Identities = 206/219 (94%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGG CYNPERIRVYILQKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPIGGRGRVIDVRWIQKKGGFCYNPERIRVYILQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 829 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGD FEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDSFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>gb|AEX94337.1| RNA polymerase beta subunit (chloroplast) [Scadoxus cinnabarinus]
Length = 1070
Score = 419 bits (1076), Expect = e-136
Identities = 206/219 (94%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWI KKGGS YNPERIRVYILQKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPIGGRGRVIDVRWIHKKGGSSYNPERIRVYILQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 829 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>gb|AEX94359.1| RNA polymerase beta subunit (chloroplast) [Liriope spicata]
Length = 1073
Score = 419 bits (1076), Expect = e-136
Identities = 207/219 (94%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 772 TAKETSLKLPIGGRGRVIDVRWIQKKGGSGYNPERIRVYISQKREIKVGDKVAGRHGNKG 831
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 832 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 891
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 892 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 951
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 952 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 990
>gb|AEX94343.1| RNA polymerase beta subunit (chloroplast) [Asphodeline damascena]
Length = 1070
Score = 418 bits (1075), Expect = e-136
Identities = 206/219 (94%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 829 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>gb|AEX94334.1| RNA polymerase beta subunit (chloroplast) [Amaryllis belladonna]
Length = 1070
Score = 418 bits (1075), Expect = e-136
Identities = 206/219 (94%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 829 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>gb|AEX94333.1| RNA polymerase beta subunit (chloroplast) [Tulbaghia violacea]
Length = 1070
Score = 418 bits (1075), Expect = e-136
Identities = 206/219 (94%), Positives = 210/219 (95%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYISQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGT VDMVFNPLGVPSRMNVGQIFECSL LA LK HYRIAPF
Sbjct: 829 IISKILSRQDMPYLQDGTSVDMVFNPLGVPSRMNVGQIFECSLGLAGHLLKRHYRIAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>ref|YP_009335325.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
gb|APO12383.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
Length = 1073
Score = 418 bits (1075), Expect = e-136
Identities = 206/219 (94%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 772 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 831
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 832 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 891
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 892 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 951
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 952 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 990
>ref|YP_009431210.1| RNA polymerase beta subunit (chloroplast) [Maianthemum bicolor]
gb|AEX94363.1| RNA polymerase beta subunit (chloroplast) [Maianthemum stellatum]
gb|ASW26646.1| RNA polymerase beta subunit (chloroplast) [Maianthemum bicolor]
Length = 1073
Score = 418 bits (1075), Expect = e-136
Identities = 206/219 (94%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 772 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 831
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 832 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 891
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 892 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 951
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 952 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 990
>gb|AEX94357.1| RNA polymerase beta subunit (chloroplast) [Dasylirion wheeleri]
Length = 1073
Score = 418 bits (1075), Expect = e-136
Identities = 206/219 (94%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 772 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 831
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 832 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 891
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 892 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 951
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 952 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 990
>gb|AEX94356.1| RNA polymerase beta subunit (chloroplast) [Beaucarnea hookeri]
Length = 1073
Score = 418 bits (1075), Expect = e-136
Identities = 206/219 (94%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 772 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 831
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 832 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 891
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 892 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 951
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 952 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 990
>gb|AFB18347.1| RNA polymerase beta subunit, partial (plastid) [Nolina atopocarpa]
Length = 1080
Score = 418 bits (1075), Expect = e-136
Identities = 206/219 (94%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 780 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 839
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 840 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 899
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 900 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 959
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 960 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 998
>ref|YP_009431124.1| RNA polymerase beta subunit (chloroplast) [Asparagus schoberioides]
gb|ASW26560.1| RNA polymerase beta subunit (chloroplast) [Asparagus schoberioides]
Length = 1070
Score = 418 bits (1074), Expect = e-136
Identities = 205/219 (93%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYR+APF
Sbjct: 829 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRVAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>ref|YP_009432549.1| RNA polymerase beta subunit (chloroplast) [Cordyline indivisa]
gb|AEX94354.1| RNA polymerase beta subunit (chloroplast) [Cordyline australis]
gb|ATB18830.1| RNA polymerase beta subunit (chloroplast) [Cordyline indivisa]
Length = 1070
Score = 418 bits (1074), Expect = e-136
Identities = 205/219 (93%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLP+GGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPVGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 829 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>ref|YP_009370013.1| RNA polymerase beta subunit (chloroplast) [Asparagus officinalis]
gb|AEX94339.1| RNA polymerase beta subunit (chloroplast) [Asparagus officinalis]
gb|AEX94340.1| RNA polymerase beta subunit (chloroplast) [Asparagus asparagoides]
gb|ARO91419.1| RNA polymerase beta subunit (chloroplast) [Asparagus officinalis]
emb|CUS18708.1| RNA polymerase beta subunit (plastid) [Asparagus officinalis]
Length = 1070
Score = 418 bits (1074), Expect = e-136
Identities = 205/219 (93%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYR+APF
Sbjct: 829 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRVAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>gb|AEX94335.1| RNA polymerase beta subunit (chloroplast) [Crinum asiaticum]
Length = 1070
Score = 418 bits (1074), Expect = e-136
Identities = 205/219 (93%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
I+SKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 829 IVSKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>ref|YP_009045558.1| RNA polymerase beta subunit (chloroplast) [Cypripedium macranthos]
ref|YP_009335156.1| RNA polymerase beta subunit (chloroplast) [Hosta ventricosa]
ref|YP_009432633.1| RNA polymerase beta subunit (chloroplast) [Hosta minor]
gb|AEX94327.1| RNA polymerase beta subunit (chloroplast) [Hosta ventricosa]
gb|AHI16741.1| RNA polymerase beta subunit (chloroplast) (chloroplast) [Cypripedium
macranthos]
gb|APO12214.1| RNA polymerase beta subunit (chloroplast) [Hosta ventricosa]
gb|ATB18913.1| RNA polymerase beta subunit (chloroplast) [Hosta minor]
Length = 1070
Score = 418 bits (1074), Expect = e-136
Identities = 205/219 (93%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYILQKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYILQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPY QDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 829 IISKILSRQDMPYFQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKS+IFDGRTGDPFEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSKIFDGRTGDPFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>ref|YP_009334482.1| RNA polymerase beta subunit (chloroplast) [Anemarrhena asphodeloides]
gb|AEX94324.1| RNA polymerase beta subunit (chloroplast) [Anemarrhena asphodeloides]
gb|APO11292.1| RNA polymerase beta subunit (chloroplast) [Anemarrhena asphodeloides]
Length = 1070
Score = 418 bits (1074), Expect = e-136
Identities = 205/219 (93%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 769 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 828
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
I+SKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYRIAPF
Sbjct: 829 IVSKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFD 888
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 889 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 948
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 949 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 987
>gb|AFB18323.1| RNA polymerase beta subunit, partial (plastid) [Asparagus
officinalis]
Length = 1072
Score = 418 bits (1074), Expect = e-136
Identities = 205/219 (93%), Positives = 211/219 (96%)
Frame = -2
Query: 747 TAKETSLKLPIGGRGRVIDVRWIQKKGGSCYNPERIRVYILQKREIKVGDKVAGRHGNKG 568
TAKETSLKLPIGGRGRVIDVRWIQKKGGS YNPERIRVYI QKREIKVGDKVAGRHGNKG
Sbjct: 772 TAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKG 831
Query: 567 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLWLAREFLKIHYRIAPFV 388
IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSL LA + LK HYR+APF
Sbjct: 832 IISKILSRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRVAPFD 891
Query: 387 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEFPGKSRIFDGRTGDPFEQPVLIGKSYIL 208
ERYEQEASRKLVFSELYEASKQTKNPWVFEPE+PGKSRIFDGRTGDPFEQPVLIGKSYIL
Sbjct: 892 ERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYIL 951
Query: 207 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGRPIGK 91
KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG+ +G+
Sbjct: 952 KLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGE 990