BLASTX nr result
ID: Ophiopogon22_contig00030831
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00030831
(444 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020265972.1| LOW QUALITY PROTEIN: mediator of RNA polymer... 89 8e-18
gb|ONK67983.1| uncharacterized protein A4U43_C05F5900 [Asparagus... 89 8e-18
gb|PKA61809.1| Mediator of RNA polymerase II transcription subun... 88 2e-17
ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II tra... 86 1e-16
ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II tra... 86 1e-16
ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II tra... 86 1e-16
ref|XP_010938078.1| PREDICTED: mediator of RNA polymerase II tra... 78 2e-14
ref|XP_020108025.1| mediator of RNA polymerase II transcription ... 79 2e-14
gb|OAY79976.1| Mediator of RNA polymerase II transcription subun... 79 2e-14
ref|XP_020108026.1| mediator of RNA polymerase II transcription ... 79 2e-14
ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II tra... 76 1e-13
ref|XP_009420227.2| PREDICTED: mediator of RNA polymerase II tra... 72 2e-12
ref|XP_018675347.1| PREDICTED: mediator of RNA polymerase II tra... 72 2e-12
ref|XP_020698954.1| mediator of RNA polymerase II transcription ... 71 4e-12
ref|XP_020698955.1| mediator of RNA polymerase II transcription ... 71 4e-12
ref|XP_020698956.1| mediator of RNA polymerase II transcription ... 71 4e-12
gb|ONM26239.1| Mediator of RNA polymerase II transcription subun... 70 5e-12
ref|XP_008668568.2| uncharacterized protein LOC100502369 isoform... 70 5e-12
gb|ONM26235.1| Mediator of RNA polymerase II transcription subun... 70 5e-12
gb|ONM26221.1| Mediator of RNA polymerase II transcription subun... 70 5e-12
>ref|XP_020265972.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
subunit 33A-like [Asparagus officinalis]
Length = 1070
Score = 89.0 bits (219), Expect(2) = 8e-18
Identities = 49/102 (48%), Positives = 62/102 (60%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLLSIVPLAI ++ ED + H ME PSRRQ L+F+LQVLGQF LLS
Sbjct: 174 CMLLSIVPLAIVPVIMEDSNRNS-------HDMEGKKYPSRRQGLVFALQVLGQFSVLLS 226
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRA 101
PP+P V ATF+ F++G NLS + H +SS++A
Sbjct: 227 PPAPAVTAANIAASKAATFVSKFKSGSTNLSAISHNDSSVKA 268
Score = 28.9 bits (63), Expect(2) = 8e-18
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P LEARLCM
Sbjct: 163 EGPIPRLEARLCM 175
>gb|ONK67983.1| uncharacterized protein A4U43_C05F5900 [Asparagus officinalis]
Length = 1020
Score = 89.0 bits (219), Expect(2) = 8e-18
Identities = 49/102 (48%), Positives = 62/102 (60%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLLSIVPLAI ++ ED + H ME PSRRQ L+F+LQVLGQF LLS
Sbjct: 417 CMLLSIVPLAIVPVIMEDSNRNS-------HDMEGKKYPSRRQGLVFALQVLGQFSVLLS 469
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRA 101
PP+P V ATF+ F++G NLS + H +SS++A
Sbjct: 470 PPAPAVTAANIAASKAATFVSKFKSGSTNLSAISHNDSSVKA 511
Score = 28.9 bits (63), Expect(2) = 8e-18
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P LEARLCM
Sbjct: 406 EGPIPRLEARLCM 418
>gb|PKA61809.1| Mediator of RNA polymerase II transcription subunit 33A [Apostasia
shenzhenica]
Length = 1628
Score = 88.2 bits (217), Expect = 2e-17
Identities = 52/103 (50%), Positives = 65/103 (63%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLLSIVPLAI I+KE C+R+ Y GM+ N SRR EL+ SLQVL Q+ GLL
Sbjct: 652 CMLLSIVPLAIVSIVKE--LDPACARSNYGEGMDANKPISRRFELVSSLQVLQQYTGLLL 709
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRAS 98
PP VVN ATFI NFRNG G+L +++S++A+
Sbjct: 710 PPPSVVNAANNAASKAATFIANFRNGSGSLGATSQKDTSIKAA 752
>ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Elaeis guineensis]
Length = 1331
Score = 85.9 bits (211), Expect = 1e-16
Identities = 58/123 (47%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Frame = -3
Query: 427 PLRHDYA--CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGM----EPNNIPSRRQELIF 266
PL H A CMLLSIVPLAI ++KE+ EM + E NN SR+ LI
Sbjct: 397 PLPHLDARLCMLLSIVPLAIVSLVKEEYEMPSLMNNGMTRSCMKETEGNNFASRKHGLIS 456
Query: 265 SLQVLGQFPGLLSPPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRASIASD 86
SLQVLGQF GLLSPP VVN ATFI N + G GNL V +RN S ++ +
Sbjct: 457 SLQVLGQFSGLLSPPPSVVNAANSAASKAATFISNLKTGSGNLG-VPNRNDSSVKAVGNM 515
Query: 85 YHL 77
HL
Sbjct: 516 LHL 518
>ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Phoenix dactylifera]
Length = 1331
Score = 85.9 bits (211), Expect = 1e-16
Identities = 51/106 (48%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAY----VHGMEPNNIPSRRQELIFSLQVLGQFP 239
CMLLSIVPLAI ++K++ EM + V G E +N S++ LIFSLQVLGQF
Sbjct: 406 CMLLSIVPLAIVPLVKDEYEMPSLINNGITRSCVKGTEGSNFASKKHGLIFSLQVLGQFS 465
Query: 238 GLLSPPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRA 101
GLLSPP VVN ATFI N + G GNL +SS++A
Sbjct: 466 GLLSPPPSVVNAANSAASKAATFISNLKTGSGNLGAPNRNDSSVKA 511
>ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Elaeis guineensis]
Length = 1352
Score = 85.9 bits (211), Expect = 1e-16
Identities = 58/123 (47%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Frame = -3
Query: 427 PLRHDYA--CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGM----EPNNIPSRRQELIF 266
PL H A CMLLSIVPLAI ++KE+ EM + E NN SR+ LI
Sbjct: 397 PLPHLDARLCMLLSIVPLAIVSLVKEEYEMPSLMNNGMTRSCMKETEGNNFASRKHGLIS 456
Query: 265 SLQVLGQFPGLLSPPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRASIASD 86
SLQVLGQF GLLSPP VVN ATFI N + G GNL V +RN S ++ +
Sbjct: 457 SLQVLGQFSGLLSPPPSVVNAANSAASKAATFISNLKTGSGNLG-VPNRNDSSVKAVGNM 515
Query: 85 YHL 77
HL
Sbjct: 516 LHL 518
>ref|XP_010938078.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Elaeis guineensis]
Length = 1330
Score = 78.2 bits (191), Expect(2) = 2e-14
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRT----AYVHGMEPNNIPSRRQELIFSLQVLGQFP 239
CMLLSIVPL+I ++KE+ EM + +Y +G E NN R+ L+ +LQVLGQF
Sbjct: 404 CMLLSIVPLSIVPLVKEEYEMPSLISKGITRSYGNGAEENNFAFRKHGLVSALQVLGQFS 463
Query: 238 GLLSPPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRA 101
GLL PP VVN ATF+ N + GGNL +SS++A
Sbjct: 464 GLLLPPPSVVNAANSAASKAATFLSNLKTVGGNLGVPNRSDSSVKA 509
Score = 28.1 bits (61), Expect(2) = 2e-14
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 393 EGPIPQLDARLCM 405
>ref|XP_020108025.1| mediator of RNA polymerase II transcription subunit 33A-like
isoform X1 [Ananas comosus]
Length = 1304
Score = 78.6 bits (192), Expect(2) = 2e-14
Identities = 47/102 (46%), Positives = 58/102 (56%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLL+I+P +I +LK++ EM E N +PSRRQ LI SLQVL QF LLS
Sbjct: 405 CMLLAILPSSIAPLLKDENEMLET---------EGNKVPSRRQGLISSLQVLAQFSSLLS 455
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRA 101
PP V+N A FI NF+ G GNL V +SS +A
Sbjct: 456 PPPSVINAANSAATKAAVFISNFKTGSGNLGMVGRNDSSPKA 497
Score = 27.7 bits (60), Expect(2) = 2e-14
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 394 EGPIPHLDARLCM 406
>gb|OAY79976.1| Mediator of RNA polymerase II transcription subunit 33A [Ananas
comosus]
Length = 1256
Score = 78.6 bits (192), Expect(2) = 2e-14
Identities = 47/102 (46%), Positives = 58/102 (56%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLL+I+P +I +LK++ EM E N +PSRRQ LI SLQVL QF LLS
Sbjct: 357 CMLLAILPSSIAPLLKDENEMLET---------EGNKVPSRRQGLISSLQVLAQFSSLLS 407
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRA 101
PP V+N A FI NF+ G GNL V +SS +A
Sbjct: 408 PPPSVINAANSAATKAAVFISNFKTGSGNLGMVGRNDSSPKA 449
Score = 27.7 bits (60), Expect(2) = 2e-14
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 346 EGPIPHLDARLCM 358
>ref|XP_020108026.1| mediator of RNA polymerase II transcription subunit 33A-like
isoform X2 [Ananas comosus]
Length = 1076
Score = 78.6 bits (192), Expect(2) = 2e-14
Identities = 47/102 (46%), Positives = 58/102 (56%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLL+I+P +I +LK++ EM E N +PSRRQ LI SLQVL QF LLS
Sbjct: 177 CMLLAILPSSIAPLLKDENEMLET---------EGNKVPSRRQGLISSLQVLAQFSSLLS 227
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRA 101
PP V+N A FI NF+ G GNL V +SS +A
Sbjct: 228 PPPSVINAANSAATKAAVFISNFKTGSGNLGMVGRNDSSPKA 269
Score = 27.7 bits (60), Expect(2) = 2e-14
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 166 EGPIPHLDARLCM 178
>ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Musa acuminata subsp. malaccensis]
Length = 1330
Score = 76.3 bits (186), Expect(2) = 1e-13
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYV----HGMEPNNIPSRRQELIFSLQVLGQFP 239
CMLLSIVPLAI ++KE+ ++ ++ H E N SRR LI SL++LGQF
Sbjct: 404 CMLLSIVPLAIVAVVKEELDIRYPVNNGFLRSNSHENEGNKFSSRRHGLISSLKMLGQFS 463
Query: 238 GLLSPPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRA 101
LL PP VVN A F+ N++ G NL+ V H +SS++A
Sbjct: 464 ALLLPPPSVVNAANNAATKAAVFVSNYKAGNNNLNVVGHNDSSIKA 509
Score = 27.7 bits (60), Expect(2) = 1e-13
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 393 EGPIPHLDARLCM 405
>ref|XP_009420227.2| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1362
Score = 71.6 bits (174), Expect(2) = 2e-12
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVH----GMEPNNIPSRRQELIFSLQVLGQFP 239
CMLLSIVPLA+ ++KE+ E ++ G E N RR LI SL++LGQF
Sbjct: 442 CMLLSIVPLAVAAVVKEENETPYPFSNGFLRSNSFGNEGNKFAVRRHALISSLKILGQFS 501
Query: 238 GLLSPPSPVVNXXXXXXXXXATFIFNFRNGGGNLS 134
LLSPP VVN A F++NF+ G NL+
Sbjct: 502 ALLSPPPSVVNVANSAATKAAVFVYNFKAGNSNLN 536
Score = 27.7 bits (60), Expect(2) = 2e-12
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 431 EGPIPHLDARLCM 443
>ref|XP_018675347.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Musa acuminata subsp. malaccensis]
Length = 1067
Score = 71.6 bits (174), Expect(2) = 2e-12
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVH----GMEPNNIPSRRQELIFSLQVLGQFP 239
CMLLSIVPLA+ ++KE+ E ++ G E N RR LI SL++LGQF
Sbjct: 442 CMLLSIVPLAVAAVVKEENETPYPFSNGFLRSNSFGNEGNKFAVRRHALISSLKILGQFS 501
Query: 238 GLLSPPSPVVNXXXXXXXXXATFIFNFRNGGGNLS 134
LLSPP VVN A F++NF+ G NL+
Sbjct: 502 ALLSPPPSVVNVANSAATKAAVFVYNFKAGNSNLN 536
Score = 27.7 bits (60), Expect(2) = 2e-12
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 431 EGPIPHLDARLCM 443
>ref|XP_020698954.1| mediator of RNA polymerase II transcription subunit 33A-like
isoform X1 [Dendrobium catenatum]
gb|PKU66907.1| Mediator of RNA polymerase II transcription subunit 33A [Dendrobium
catenatum]
Length = 1320
Score = 70.9 bits (172), Expect(2) = 4e-12
Identities = 42/110 (38%), Positives = 60/110 (54%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLLSIVPL I ++KE+ R++Y + + N + RR LI SLQ+L + LL+
Sbjct: 400 CMLLSIVPLTIVAVVKEEVH-NPYPRSSYEYDLGTNKLTPRRDGLISSLQLLESYTALLT 458
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRASIASDYHL 77
PP V+N ATFI NFRNG +L + +S ++ + HL
Sbjct: 459 PPPSVINAANNAASKAATFITNFRNGSSSLGISGQKKASSVKAVGNMLHL 508
Score = 27.7 bits (60), Expect(2) = 4e-12
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 389 EGPIPHLDARLCM 401
>ref|XP_020698955.1| mediator of RNA polymerase II transcription subunit 33A-like
isoform X2 [Dendrobium catenatum]
Length = 1283
Score = 70.9 bits (172), Expect(2) = 4e-12
Identities = 42/110 (38%), Positives = 60/110 (54%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLLSIVPL I ++KE+ R++Y + + N + RR LI SLQ+L + LL+
Sbjct: 363 CMLLSIVPLTIVAVVKEEVH-NPYPRSSYEYDLGTNKLTPRRDGLISSLQLLESYTALLT 421
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRASIASDYHL 77
PP V+N ATFI NFRNG +L + +S ++ + HL
Sbjct: 422 PPPSVINAANNAASKAATFITNFRNGSSSLGISGQKKASSVKAVGNMLHL 471
Score = 27.7 bits (60), Expect(2) = 4e-12
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 352 EGPIPHLDARLCM 364
>ref|XP_020698956.1| mediator of RNA polymerase II transcription subunit 33A-like
isoform X3 [Dendrobium catenatum]
Length = 1202
Score = 70.9 bits (172), Expect(2) = 4e-12
Identities = 42/110 (38%), Positives = 60/110 (54%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLLSIVPL I ++KE+ R++Y + + N + RR LI SLQ+L + LL+
Sbjct: 282 CMLLSIVPLTIVAVVKEEVH-NPYPRSSYEYDLGTNKLTPRRDGLISSLQLLESYTALLT 340
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRASIASDYHL 77
PP V+N ATFI NFRNG +L + +S ++ + HL
Sbjct: 341 PPPSVINAANNAASKAATFITNFRNGSSSLGISGQKKASSVKAVGNMLHL 390
Score = 27.7 bits (60), Expect(2) = 4e-12
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 271 EGPIPHLDARLCM 283
>gb|ONM26239.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 1330
Score = 70.5 bits (171), Expect(2) = 5e-12
Identities = 44/103 (42%), Positives = 60/103 (58%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLL+++PL+I IL+E+ +M G+E N I +RQ LI SLQ L Q+ GLL
Sbjct: 416 CMLLALIPLSIAAILQEESDM---------FGVEGNKILPQRQGLISSLQDLIQYSGLLV 466
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRAS 98
PPS VVN A F N++ G GN S + +SSM+A+
Sbjct: 467 PPSSVVNAANAAASKAAIFKANYKAGAGNTSMMDQTDSSMKAA 509
Score = 27.7 bits (60), Expect(2) = 5e-12
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 405 EGPIPHLDARLCM 417
>ref|XP_008668568.2| uncharacterized protein LOC100502369 isoform X1 [Zea mays]
gb|ONM26225.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
gb|ONM26227.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
gb|ONM26230.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 1299
Score = 70.5 bits (171), Expect(2) = 5e-12
Identities = 44/103 (42%), Positives = 60/103 (58%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLL+++PL+I IL+E+ +M G+E N I +RQ LI SLQ L Q+ GLL
Sbjct: 385 CMLLALIPLSIAAILQEESDM---------FGVEGNKILPQRQGLISSLQDLIQYSGLLV 435
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRAS 98
PPS VVN A F N++ G GN S + +SSM+A+
Sbjct: 436 PPSSVVNAANAAASKAAIFKANYKAGAGNTSMMDQTDSSMKAA 478
Score = 27.7 bits (60), Expect(2) = 5e-12
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 374 EGPIPHLDARLCM 386
>gb|ONM26235.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 1292
Score = 70.5 bits (171), Expect(2) = 5e-12
Identities = 44/103 (42%), Positives = 60/103 (58%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLL+++PL+I IL+E+ +M G+E N I +RQ LI SLQ L Q+ GLL
Sbjct: 378 CMLLALIPLSIAAILQEESDM---------FGVEGNKILPQRQGLISSLQDLIQYSGLLV 428
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRAS 98
PPS VVN A F N++ G GN S + +SSM+A+
Sbjct: 429 PPSSVVNAANAAASKAAIFKANYKAGAGNTSMMDQTDSSMKAA 471
Score = 27.7 bits (60), Expect(2) = 5e-12
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 367 EGPIPHLDARLCM 379
>gb|ONM26221.1| Mediator of RNA polymerase II transcription subunit 33A [Zea mays]
Length = 1260
Score = 70.5 bits (171), Expect(2) = 5e-12
Identities = 44/103 (42%), Positives = 60/103 (58%)
Frame = -3
Query: 406 CMLLSIVPLAIGQILKEDCEMTTCSRTAYVHGMEPNNIPSRRQELIFSLQVLGQFPGLLS 227
CMLL+++PL+I IL+E+ +M G+E N I +RQ LI SLQ L Q+ GLL
Sbjct: 385 CMLLALIPLSIAAILQEESDM---------FGVEGNKILPQRQGLISSLQDLIQYSGLLV 435
Query: 226 PPSPVVNXXXXXXXXXATFIFNFRNGGGNLSPVCHRNSSMRAS 98
PPS VVN A F N++ G GN S + +SSM+A+
Sbjct: 436 PPSSVVNAANAAASKAAIFKANYKAGAGNTSMMDQTDSSMKAA 478
Score = 27.7 bits (60), Expect(2) = 5e-12
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 443 EGPVPSLEARLCM 405
EGP+P L+ARLCM
Sbjct: 374 EGPIPHLDARLCM 386