BLASTX nr result

ID: Ophiopogon22_contig00030105 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00030105
         (824 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020240775.1| pentatricopeptide repeat-containing protein ...    65   2e-08
ref|XP_008792753.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-06

>ref|XP_020240775.1| pentatricopeptide repeat-containing protein At3g29290 isoform X1
           [Asparagus officinalis]
 ref|XP_020240776.1| pentatricopeptide repeat-containing protein At3g29290 isoform X2
           [Asparagus officinalis]
 gb|ONK60094.1| uncharacterized protein A4U43_C08F14120 [Asparagus officinalis]
          Length = 534

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 31/44 (70%), Positives = 34/44 (77%)
 Frame = -3

Query: 819 TLAKKLYTKMISIGLKQDGKTRALMLQHLPNEVARHPRARCVQR 688
           TLAKK+Y KM SIGL  DGKTRALMLQHLP +  + PR  CVQR
Sbjct: 490 TLAKKIYAKMTSIGLNPDGKTRALMLQHLPEKGPKSPRKNCVQR 533


>ref|XP_008792753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290
           [Phoenix dactylifera]
          Length = 607

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = -3

Query: 822 ITLAKKLYTKMISIGLKQDGKTRALMLQHLPN 727
           ITLAKKLYTKM SIGLK DG+TRALMLQHLPN
Sbjct: 572 ITLAKKLYTKMRSIGLKPDGRTRALMLQHLPN 603


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