BLASTX nr result

ID: Ophiopogon22_contig00029182 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00029182
         (562 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020259944.1| tetraspanin-18-like isoform X2 [Asparagus of...    67   3e-10
ref|XP_020259943.1| tetraspanin-18-like isoform X1 [Asparagus of...    67   6e-10

>ref|XP_020259944.1| tetraspanin-18-like isoform X2 [Asparagus officinalis]
          Length = 193

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +2

Query: 116 AGLLPDLNYLQTFVGLIVVLFSLWMLNDWNRHGIDKTSAP 235
           +  L  LNYLQTF G  V+L+SLWMLNDWNRHG+DK+SAP
Sbjct: 11  SSFLKFLNYLQTFAGAFVLLYSLWMLNDWNRHGVDKSSAP 50


>ref|XP_020259943.1| tetraspanin-18-like isoform X1 [Asparagus officinalis]
 gb|ONK70894.1| uncharacterized protein A4U43_C04F2620 [Asparagus officinalis]
          Length = 234

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +2

Query: 116 AGLLPDLNYLQTFVGLIVVLFSLWMLNDWNRHGIDKTSAP 235
           +  L  LNYLQTF G  V+L+SLWMLNDWNRHG+DK+SAP
Sbjct: 11  SSFLKFLNYLQTFAGAFVLLYSLWMLNDWNRHGVDKSSAP 50


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