BLASTX nr result

ID: Ophiopogon22_contig00028919 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00028919
         (885 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011214361.1| PREDICTED: glycine-rich cell wall structural...    56   3e-06

>ref|XP_011214361.1| PREDICTED: glycine-rich cell wall structural protein [Bactrocera
           dorsalis]
 ref|XP_011214362.1| PREDICTED: glycine-rich cell wall structural protein [Bactrocera
           dorsalis]
          Length = 580

 Score = 55.8 bits (133), Expect(2) = 3e-06
 Identities = 38/92 (41%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
 Frame = -2

Query: 455 AGGPGCSGAMAGL-VGADPEEGGAPKAGGRTGELRGAAGVGNGPDLGEDGWPEVGERPGA 279
           AGG G  G   G   G  P  GG P AGG  G   GA G G G   G  G P  G  PG 
Sbjct: 271 AGGSGFGGGAGGRGPGGAPGYGGGPGAGGAPGFGGGAGGRGPGGAPGYGGGPGAGGAPGF 330

Query: 278 GSGWSEGQHAQWWRGRSWAPEGHGAGRPGSSG 183
           G G   G  A  + G +  P G G G PG+ G
Sbjct: 331 GGGPGAG-GAPGFGGGAGGPGGRGPGGPGAGG 361



 Score = 24.6 bits (52), Expect(2) = 3e-06
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = -3

Query: 205 PAGLGRAGSGRIRIWRGEAAARIGEGWVEGGPPGIGSVA 89
           P G G  G+G    + G A  R   G   GG PG G  A
Sbjct: 386 PGGSGGPGAGGAPGFGGGAGGRGPGGPSAGGAPGFGGGA 424


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