BLASTX nr result

ID: Ophiopogon22_contig00027975 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00027975
         (436 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAV80946.1| hypothetical protein CFOL_v3_24405 [Cephalotus f...    46   3e-06
gb|PNX93836.1| hypothetical protein L195_g016998, partial [Trifo...    45   6e-06

>dbj|GAV80946.1| hypothetical protein CFOL_v3_24405 [Cephalotus follicularis]
          Length = 111

 Score = 45.8 bits (107), Expect(2) = 3e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
 Frame = -1

Query: 226 MRDNNRESK--KALRDYAAPSMTWVTTSIQRLPVQVNNFELCSGLMQML 86
           M ++  E K  +ALRDY  PS+   T+SI R P+Q NNFE+   ++QM+
Sbjct: 1   MEEDQAEVKAYRALRDYVVPSINGATSSILRTPIQANNFEIKPSIIQMI 49



 Score = 33.1 bits (74), Expect(2) = 3e-06
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 86  GLPTEDLNEHRKNFIEICNMIKSIQIS 6
           GLP +DLN H  NF+EIC+  K   +S
Sbjct: 57  GLPNDDLNIHITNFLEICDTFKPNGVS 83


>gb|PNX93836.1| hypothetical protein L195_g016998, partial [Trifolium pratense]
          Length = 1247

 Score = 45.1 bits (105), Expect(2) = 6e-06
 Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = -1

Query: 268 FEDSFERK-RTHKNTMRDNNRESKKALRDYAAPSMTWVTTSIQRLPVQVNNFELCSGLMQ 92
           F+   ER  R ++   R      ++ LRDY  PS T +TTSI   PVQ NNFEL  GL+Q
Sbjct: 12  FDSEIERTARRNRAKSRAMAEIPRRTLRDYFTPS-TNITTSIVNPPVQANNFELKPGLIQ 70

Query: 91  ML 86
           M+
Sbjct: 71  MI 72



 Score = 32.3 bits (72), Expect(2) = 6e-06
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 86  GLPTEDLNEHRKNFIEICNMIKSIQISP 3
           G PTED N H KNFI + + +K   ++P
Sbjct: 79  GSPTEDPNAHLKNFIRVADSVKCNGVTP 106


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