BLASTX nr result
ID: Ophiopogon22_contig00027772
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00027772
(404 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020251824.1| pentatricopeptide repeat-containing protein ... 107 2e-24
ref|XP_010933859.1| PREDICTED: pentatricopeptide repeat-containi... 80 6e-15
ref|XP_008810585.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 72 8e-12
ref|XP_009413303.1| PREDICTED: pentatricopeptide repeat-containi... 64 4e-09
ref|XP_023734251.1| pentatricopeptide repeat-containing protein ... 60 8e-08
ref|XP_021665977.1| pentatricopeptide repeat-containing protein ... 59 3e-07
ref|XP_002511505.1| PREDICTED: pentatricopeptide repeat-containi... 55 5e-06
ref|XP_020548243.1| LOW QUALITY PROTEIN: pentatricopeptide repea... 54 9e-06
>ref|XP_020251824.1| pentatricopeptide repeat-containing protein At1g74750-like
[Asparagus officinalis]
ref|XP_020251825.1| pentatricopeptide repeat-containing protein At1g74750-like
[Asparagus officinalis]
ref|XP_020251826.1| pentatricopeptide repeat-containing protein At1g74750-like
[Asparagus officinalis]
gb|ONK81463.1| uncharacterized protein A4U43_C01F29350 [Asparagus officinalis]
Length = 854
Score = 107 bits (268), Expect = 2e-24
Identities = 64/129 (49%), Positives = 81/129 (62%)
Frame = -1
Query: 392 SGMTVQNFVKAGIATVGMLSELINYRIPATDGHGQLANPNCVVSTGSPSPIPNTRSANGK 213
S M QNFVKAG+ATVGMLSELINYRIP D H + + V +P P+ NTRS NGK
Sbjct: 117 SSMATQNFVKAGVATVGMLSELINYRIPRADDHDDHLSTSNYVINNTP-PVSNTRSNNGK 175
Query: 212 SRNHAKYSRVQAXXXXXXXXXXXXSNPTSAQSCPAARACNTGRMKAKQNNSGTSAKAYRV 33
SRN+AKYS+VQ SN + +Q+ + +T R K+KQN+ GTSA +R
Sbjct: 176 SRNNAKYSKVQ-PSSSISTEERSNSNSSPSQNNNGVK-YSTWRTKSKQNSPGTSAGVHRS 233
Query: 32 SSNVQDQRH 6
S++ DQRH
Sbjct: 234 QSSIPDQRH 242
>ref|XP_010933859.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
isoform X1 [Elaeis guineensis]
ref|XP_010933868.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
isoform X2 [Elaeis guineensis]
Length = 874
Score = 80.5 bits (197), Expect = 6e-15
Identities = 49/134 (36%), Positives = 73/134 (54%)
Frame = -1
Query: 404 LANPSGMTVQNFVKAGIATVGMLSELINYRIPATDGHGQLANPNCVVSTGSPSPIPNTRS 225
L + S +T + +VKAGIA+VGM SEL+NYRIPA + H A N VV S P ++S
Sbjct: 123 LLHSSKLTAERYVKAGIASVGMFSELVNYRIPAANQHVLFAPQNGVVD--STQPFTTSKS 180
Query: 224 ANGKSRNHAKYSRVQAXXXXXXXXXXXXSNPTSAQSCPAARACNTGRMKAKQNNSGTSAK 45
+N K RN A R + ++ ++AQ+ +A G +K+KQN GTS
Sbjct: 181 SNSKPRNRANNPRTE--PNASANIVGGSNSNSTAQNGTGNKASKAGYVKSKQNMPGTSVM 238
Query: 44 AYRVSSNVQDQRHC 3
++ +++ QR C
Sbjct: 239 SHGSPVDMKSQRQC 252
>ref|XP_008810585.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g74750-like [Phoenix dactylifera]
Length = 874
Score = 71.6 bits (174), Expect = 8e-12
Identities = 47/134 (35%), Positives = 70/134 (52%)
Frame = -1
Query: 404 LANPSGMTVQNFVKAGIATVGMLSELINYRIPATDGHGQLANPNCVVSTGSPSPIPNTRS 225
L + S +T ++FVKAGIA+VG SEL+NYRI A + H A P+ +V S P ++
Sbjct: 123 LLHSSKLTAEHFVKAGIASVGTFSELVNYRIQAANQHVLFAPPDGMVD--STQPFTASKF 180
Query: 224 ANGKSRNHAKYSRVQAXXXXXXXXXXXXSNPTSAQSCPAARACNTGRMKAKQNNSGTSAK 45
+N K RN A R + S+ ++AQ+ +A G +K+KQN GTS
Sbjct: 181 SNSKPRNRANNPRTE--PNSSANTVGGSSSNSTAQNGAGNKASQVGYVKSKQNIPGTSVM 238
Query: 44 AYRVSSNVQDQRHC 3
+ + + QR C
Sbjct: 239 SQGSPVDTKSQRQC 252
>ref|XP_009413303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18900
[Musa acuminata subsp. malaccensis]
ref|XP_009413304.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18900
[Musa acuminata subsp. malaccensis]
Length = 866
Score = 63.9 bits (154), Expect = 4e-09
Identities = 45/132 (34%), Positives = 67/132 (50%)
Frame = -1
Query: 404 LANPSGMTVQNFVKAGIATVGMLSELINYRIPATDGHGQLANPNCVVSTGSPSPIPNTRS 225
+ N S +T FVKAG+ATV M SEL++++ P T+ Q C+ + PS NT S
Sbjct: 120 MLNSSKLTAGRFVKAGMATVSMFSELVSHKTPGTEPGPQ----RCMADSTQPS--FNTIS 173
Query: 224 ANGKSRNHAKYSRVQAXXXXXXXXXXXXSNPTSAQSCPAARACNTGRMKAKQNNSGTSAK 45
+N KS N YS+ Q + P+S+ P+ R G +KAKQN + +S
Sbjct: 174 SNDKSHNKPNYSKRQPSLNLVGVSDSSSTCPSSSVEKPSMR----GNVKAKQNVTESSIS 229
Query: 44 AYRVSSNVQDQR 9
+ S ++QR
Sbjct: 230 NNGLPSGAKNQR 241
>ref|XP_023734251.1| pentatricopeptide repeat-containing protein At1g18900-like [Lactuca
sativa]
gb|PLY73469.1| hypothetical protein LSAT_4X106880 [Lactuca sativa]
Length = 796
Score = 60.1 bits (144), Expect = 8e-08
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Frame = -1
Query: 395 PSGMTVQNFVKAGIATVGMLSELINYRIPATDGHGQLANPNCVVSTGSPSP--------I 240
PSG+T +FV+AGIA V L++++NY+IP T+G Q N VV G P P I
Sbjct: 98 PSGLTTGHFVRAGIAAVNFLNDVVNYKIPMTEGSSQ----NYVVDHGRPIPNVKPYKKVI 153
Query: 239 PNTRSANGKSRNHAKYSRVQAXXXXXXXXXXXXSNPTSAQSCPAARACNTGRMK 78
P +++ KS N Y +++ + S ++ P + NT R K
Sbjct: 154 PEKTTSSDKSSNVKVYKKIEPQTSAQKNPTSVAKSKPSGKTAPNFQNQNTKRSK 207
>ref|XP_021665977.1| pentatricopeptide repeat-containing protein At1g18900-like [Hevea
brasiliensis]
Length = 873
Score = 58.5 bits (140), Expect = 3e-07
Identities = 39/132 (29%), Positives = 60/132 (45%)
Frame = -1
Query: 404 LANPSGMTVQNFVKAGIATVGMLSELINYRIPATDGHGQLANPNCVVSTGSPSPIPNTRS 225
+A+PS FVKAGIAT+ LS+L+ Y+IP +DG G + NC+V P +S
Sbjct: 122 VAHPSPPISDQFVKAGIATISFLSDLVTYKIPISDGSGINSPKNCMVDPTRPH--STLKS 179
Query: 224 ANGKSRNHAKYSRVQAXXXXXXXXXXXXSNPTSAQSCPAARACNTGRMKAKQNNSGTSAK 45
+N K +S+V SN S + + G +G+S K
Sbjct: 180 SNVKPIRRENFSKVYPKPSSEAVVQSDISNYNSFKDKGEKSSFIAGSKPVSSTTAGSSVK 239
Query: 44 AYRVSSNVQDQR 9
+ ++S D+R
Sbjct: 240 NHSIASGSCDKR 251
>ref|XP_002511505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18900
[Ricinus communis]
gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 55.1 bits (131), Expect = 5e-06
Identities = 37/121 (30%), Positives = 53/121 (43%)
Frame = -1
Query: 371 FVKAGIATVGMLSELINYRIPATDGHGQLANPNCVVSTGSPSPIPNTRSANGKSRNHAKY 192
F KAGIA V LS+L+NY++P TDG G + NC+V P RS+N K
Sbjct: 134 FFKAGIAAVSFLSDLVNYKLPITDGSGINSPKNCMVDPTRPQ--STVRSSNVKPIRRENC 191
Query: 191 SRVQAXXXXXXXXXXXXSNPTSAQSCPAARACNTGRMKAKQNNSGTSAKAYRVSSNVQDQ 12
S+V SN S + + G + +G S K ++S+ D+
Sbjct: 192 SKVYPKASPEAAVSSSTSNYDSTRDKSEKSSFIKGSKRVSNTPAGNSVKTCSIASDTCDR 251
Query: 11 R 9
R
Sbjct: 252 R 252
>ref|XP_020548243.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
At1g74750-like [Sesamum indicum]
Length = 856
Score = 54.3 bits (129), Expect = 9e-06
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = -1
Query: 404 LANPSGMTVQNFVKAGIATVGMLSELINYRIPATDGHGQLAN-PNCVVSTGSPSPIPNTR 228
+ + S FVKAG+A VG+LS+L+NYRIP TDG + + N +V PI N R
Sbjct: 115 IVHSSPPIADQFVKAGMAAVGLLSDLVNYRIPMTDGSAMVTSLQNSMVD--PTKPISNVR 172
Query: 227 SANGK-SRNHAKYSR 186
SAN K SR Y +
Sbjct: 173 SANMKTSRKDKNYDK 187